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1.
Elife ; 72018 05 29.
Article in English | MEDLINE | ID: mdl-29809148

ABSTRACT

Non-centrosomal microtubule organizing centers (MTOCs) are important for microtubule organization in many cell types. In fission yeast Schizosaccharomyces pombe, the protein Mto1, together with partner protein Mto2 (Mto1/2 complex), recruits the γ-tubulin complex to multiple non-centrosomal MTOCs, including the nuclear envelope (NE). Here, we develop a comparative-interactome mass spectrometry approach to determine how Mto1 localizes to the NE. Surprisingly, we find that Mto1, a constitutively cytoplasmic protein, docks at nuclear pore complexes (NPCs), via interaction with exportin Crm1 and cytoplasmic FG-nucleoporin Nup146. Although Mto1 is not a nuclear export cargo, it binds Crm1 via a nuclear export signal-like sequence, and docking requires both Ran in the GTP-bound state and Nup146 FG repeats. In addition to determining the mechanism of MTOC formation at the NE, our results reveal a novel role for Crm1 and the nuclear export machinery in the stable docking of a cytoplasmic protein complex at NPCs.


Subject(s)
Karyopherins/metabolism , Microtubule-Organizing Center/physiology , Microtubules/metabolism , Nuclear Pore/physiology , Receptors, Cytoplasmic and Nuclear/metabolism , Schizosaccharomyces/physiology , Active Transport, Cell Nucleus , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cytoplasm/metabolism , Karyopherins/chemistry , Karyopherins/genetics , Microtubule-Associated Proteins/genetics , Microtubule-Associated Proteins/metabolism , Molecular Docking Simulation , Nuclear Envelope , Receptors, Cytoplasmic and Nuclear/chemistry , Receptors, Cytoplasmic and Nuclear/genetics , Schizosaccharomyces pombe Proteins/chemistry , Schizosaccharomyces pombe Proteins/genetics , Schizosaccharomyces pombe Proteins/metabolism , Spindle Apparatus , Exportin 1 Protein
2.
Cell Rep ; 15(1): 77-85, 2016 Apr 05.
Article in English | MEDLINE | ID: mdl-27052169

ABSTRACT

DNA methylation at imprinting control regions (ICRs) is established in gametes in a sex-specific manner and has to be stably maintained during development and in somatic cells to ensure the correct monoallelic expression of imprinted genes. In addition to DNA methylation, the ICRs are marked by allele-specific histone modifications. Whether these marks are essential for maintenance of genomic imprinting is largely unclear. Here, we show that the histone H3 lysine 9 methylases G9a and GLP are required for stable maintenance of imprinted DNA methylation in embryonic stem cells; however, their catalytic activity and the G9a/GLP-dependent H3K9me2 mark are completely dispensable for imprinting maintenance despite the genome-wide loss of non-imprinted DNA methylation in H3K9me2-depleted cells. We provide additional evidence that the G9a/GLP complex protects imprinted DNA methylation by recruitment of de novo DNA methyltransferases, which antagonize TET dioxygenass-dependent erosion of DNA methylation at ICRs.


Subject(s)
DNA Methylation , Embryonic Stem Cells/metabolism , Genomic Imprinting , Histocompatibility Antigens/metabolism , Histone-Lysine N-Methyltransferase/metabolism , Cell Line , Histocompatibility Antigens/genetics , Histone-Lysine N-Methyltransferase/genetics , Humans
3.
Nucleic Acids Res ; 42(6): 3529-41, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24371281

ABSTRACT

Tumourigenic transformation of normal cells into cancer typically involves several steps resulting in acquisition of unlimited growth potential, evasion of apoptosis and non-responsiveness to growth inhibitory signals. Both genetic and epigenetic changes can contribute to cancer development and progression. Given the vast genetic heterogeneity of human cancers and difficulty to monitor cancer-initiating events in vivo, the precise relationship between acquisition of genetic mutations and the temporal progression of epigenetic alterations in transformed cells is largely unclear. Here, we use an in vitro model system to investigate the contribution of cellular immortality and oncogenic transformation of primary human cells to epigenetic reprogramming of DNA methylation and gene expression. Our data demonstrate that extension of replicative life span of the cells is sufficient to induce accumulation of DNA methylation at gene promoters and large-scale changes in gene expression in a time-dependent manner. In contrast, continuous expression of cooperating oncogenes in immortalized cells, although essential for anchorage-independent growth and evasion of apoptosis, does not affect de novo DNA methylation at promoters and induces subtle expression changes. Taken together, these observations imply that cellular immortality promotes epigenetic adaptation to highly proliferative state, whereas transforming oncogenes confer additional properties to transformed human cells.


Subject(s)
Cell Transformation, Neoplastic , DNA Methylation , Epigenesis, Genetic , Oncogenes , Animals , Cell Line , Cell Line, Transformed , Humans , Male , Mice , NIH 3T3 Cells , Promoter Regions, Genetic
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