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1.
Curr Biol ; 33(5): 940-956.e10, 2023 03 13.
Article in English | MEDLINE | ID: mdl-36791723

ABSTRACT

The pathogenic bacterium Streptococcus pneumoniae (S. pneumoniae) can invade the cerebrospinal fluid (CSF) and cause meningitis with devastating consequences. Whether and how sensory cells in the central nervous system (CNS) become activated during bacterial infection, as recently reported for the peripheral nervous system, is not known. We find that CSF infection by S. pneumoniae in larval zebrafish leads to changes in posture and behavior that are reminiscent of pneumococcal meningitis, including dorsal arching and epileptic-like seizures. We show that during infection, invasion of the CSF by S. pneumoniae massively activates in vivo sensory neurons contacting the CSF, referred to as "CSF-cNs" and previously shown to detect spinal curvature and to control posture, locomotion, and spine morphogenesis. We find that CSF-cNs express orphan bitter taste receptors and respond in vitro to bacterial supernatant and metabolites via massive calcium transients, similar to the ones observed in vivo during infection. Upon infection, CSF-cNs also upregulate the expression of numerous cytokines and complement components involved in innate immunity. Accordingly, we demonstrate, using cell-specific ablation and blockade of neurotransmission, that CSF-cN neurosecretion enhances survival of the host during S. pneumoniae infection. Finally, we show that CSF-cNs respond to various pathogenic bacteria causing meningitis in humans, as well as to the supernatant of cells infected by a neurotropic virus. Altogether, our work uncovers that central sensory neurons in the spinal cord, previously involved in postural control and morphogenesis, contribute as well to host survival by responding to the invasion of the CSF by pathogenic bacteria during meningitis.


Subject(s)
Central Nervous System Infections , Streptococcus pneumoniae , Animals , Humans , Streptococcus pneumoniae/physiology , Zebrafish/physiology , Central Nervous System , Sensory Receptor Cells/physiology
2.
Elife ; 92020 10 13.
Article in English | MEDLINE | ID: mdl-33048048

ABSTRACT

The cerebrospinal fluid (CSF) contains an extracellular thread conserved in vertebrates, the Reissner fiber, which controls body axis morphogenesis in the zebrafish embryo. Yet, the signaling cascade originating from this fiber to ensure body axis straightening is not understood. Here, we explore the functional link between the Reissner fiber and undifferentiated spinal neurons contacting the CSF (CSF-cNs). First, we show that the Reissner fiber is required in vivo for the expression of urp2, a neuropeptide expressed in CSF-cNs. We show that the Reissner fiber is also required for embryonic calcium transients in these spinal neurons. Finally, we study how local adrenergic activation can substitute for the Reissner fiber-signaling pathway to CSF-cNs and rescue body axis morphogenesis. Our results show that the Reissner fiber acts on CSF-cNs and thereby contributes to establish body axis morphogenesis, and suggest it does so by controlling the availability of a chemical signal in the CSF.


Subject(s)
Cerebrospinal Fluid/metabolism , Neurons/physiology , Spinal Nerves/embryology , Zebrafish/embryology , Animals , Embryo, Nonmammalian/embryology , Fish Proteins/genetics , Fish Proteins/metabolism , Gene Expression , Morphogenesis/physiology , Neuropeptides/genetics , Neuropeptides/metabolism , Signal Transduction , Zebrafish/genetics
3.
Curr Biol ; 30(5): 827-839.e4, 2020 03 09.
Article in English | MEDLINE | ID: mdl-32084399

ABSTRACT

Recent evidence indicates active roles for the cerebrospinal fluid (CSF) on body axis development and morphogenesis of the spine, implying CSF-contacting neurons (CSF-cNs) in the spinal cord. CSF-cNs project a ciliated apical extension into the central canal that is enriched in the channel PKD2L1 and enables the detection of spinal curvature in a directional manner. Dorsolateral CSF-cNs ipsilaterally respond to lateral bending although ventral CSF-cNs respond to longitudinal bending. Historically, the implication of the Reissner fiber (RF), a long extracellular thread in the CSF, to CSF-cN sensory functions has remained a subject of debate. Here, we reveal, using electron microscopy in zebrafish larvae, that the RF is in close vicinity with cilia and microvilli of ventral and dorsolateral CSF-cNs. We investigate in vivo the role of cilia and the RF in the mechanosensory functions of CSF-cNs by combining calcium imaging with patch-clamp recordings. We show that disruption of cilia motility affects CSF-cN sensory responses to passive and active curvature of the spinal cord without affecting the Pkd2l1 channel activity. Because ciliary defects alter the formation of the RF, we investigated whether the RF contributes to CSF-cN mechanosensitivity in vivo. Using a hypomorphic mutation in the scospondin gene that forbids the aggregation of SCO-spondin into a fiber, we demonstrate in vivo that the RF per se is critical for CSF-cN mechanosensory function. Our study uncovers that neurons contacting the cerebrospinal fluid functionally interact with the RF to detect spinal curvature in the vertebrate spinal cord.


Subject(s)
Cerebrospinal Fluid/physiology , Morphogenesis , Sensory Receptor Cells/physiology , Spinal Cord/growth & development , Zebrafish/growth & development , Animals , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , Spinal Cord/ultrastructure
4.
Elife ; 92020 Jan 09.
Article in English | MEDLINE | ID: mdl-31916933

ABSTRACT

Circulation of the cerebrospinal fluid (CSF) contributes to body axis formation and brain development. Here, we investigated the unexplained origins of the CSF flow bidirectionality in the central canal of the spinal cord of 30 hpf zebrafish embryos and its impact on development. Experiments combined with modeling and simulations demonstrate that the CSF flow is generated locally by caudally-polarized motile cilia along the ventral wall of the central canal. The closed geometry of the canal imposes the average flow rate to be null, explaining the reported bidirectionality. We also demonstrate that at this early stage, motile cilia ensure the proper formation of the central canal. Furthermore, we demonstrate that the bidirectional flow accelerates the transport of particles in the CSF via a coupled convective-diffusive transport process. Our study demonstrates that cilia activity combined with muscle contractions sustain the long-range transport of extracellular lipidic particles, enabling embryonic growth.


Subject(s)
Cerebrospinal Fluid/physiology , Rheology , Spinal Cord/physiology , Animals , Animals, Genetically Modified , Biological Transport , Cerebral Ventricles/physiology , Cilia/physiology , Embryo, Nonmammalian/physiology , Embryonic Development , Green Fluorescent Proteins/metabolism , Muscle Contraction/physiology , Zebrafish/embryology , Zebrafish/physiology
5.
PLoS Biol ; 17(4): e3000235, 2019 04.
Article in English | MEDLINE | ID: mdl-31002663

ABSTRACT

Multiple types of microvilliated sensory cells exhibit an apical extension thought to be instrumental in the detection of sensory cues. The investigation of the mechanisms underlying morphogenesis of sensory apparatus is critical to understand the biology of sensation. Most of what we currently know comes from the study of the hair bundle of the inner ear sensory cells, but morphogenesis and function of other sensory microvilliated apical extensions remain poorly understood. We focused on spinal sensory neurons that contact the cerebrospinal fluid (CSF) through the projection of a microvilliated apical process in the central canal, referred to as cerebrospinal fluid-contacting neurons (CSF-cNs). CSF-cNs respond to pH and osmolarity changes as well as mechanical stimuli associated with changes of flow and tail bending. In vivo time-lapse imaging in zebrafish embryos revealed that CSF-cNs are atypical neurons that do not lose their apical attachment and form a ring of actin at the apical junctional complexes (AJCs) that they retain during differentiation. We show that the actin-based protrusions constituting the microvilliated apical extension arise and elongate from this ring of actin, and we identify candidate molecular factors underlying every step of CSF-cN morphogenesis. We demonstrate that Crumbs 1 (Crb1), Myosin 3b (Myo3b), and Espin orchestrate the morphogenesis of CSF-cN apical extension. Using calcium imaging in crb1 and espin mutants, we further show that the size of the apical extension modulates the amplitude of CSF-cN sensory response to bending of the spinal cord. Based on our results, we propose that the apical actin ring could be a common site of initiation of actin-based protrusions in microvilliated sensory cells. Furthermore, our work provides a set of actors underlying actin-based protrusion elongation shared by different sensory cell types and highlights the critical role of the apical extension shape in sensory detection.


Subject(s)
Mechanotransduction, Cellular/physiology , Microvilli/physiology , Sensory Receptor Cells/physiology , Actins/metabolism , Animals , Cell Differentiation , Cell Surface Extensions/physiology , Cerebrospinal Fluid/physiology , Morphogenesis/physiology , Neurons/physiology , Spinal Cord/metabolism , Zebrafish/metabolism
6.
Nat Commun ; 9(1): 3804, 2018 09 18.
Article in English | MEDLINE | ID: mdl-30228263

ABSTRACT

Defects in cerebrospinal fluid (CSF) flow may contribute to idiopathic scoliosis. However, the mechanisms underlying detection of CSF flow in the central canal of the spinal cord are unknown. Here we demonstrate that CSF flows bidirectionally along the antero-posterior axis in the central canal of zebrafish embryos. In the cfap298tm304 mutant, reduction of cilia motility slows transport posteriorly down the central canal and abolishes spontaneous activity of CSF-contacting neurons (CSF-cNs). Loss of the sensory Pkd2l1 channel nearly abolishes CSF-cN calcium activity and single channel opening. Recording from isolated CSF-cNs in vitro, we show that CSF-cNs are mechanosensory and require Pkd2l1 to respond to pressure. Additionally, adult pkd2l1 mutant zebrafish develop an exaggerated spine curvature, reminiscent of kyphosis in humans. These results indicate that CSF-cNs are mechanosensory cells whose Pkd2l1-driven spontaneous activity reflects CSF flow in vivo. Furthermore, Pkd2l1 in CSF-cNs contributes to maintenance of natural curvature of the spine.


Subject(s)
Cerebrospinal Fluid/metabolism , Mechanotransduction, Cellular , Neurons/metabolism , Spinal Cord/metabolism , Zebrafish Proteins/metabolism , Zebrafish/metabolism , Animals , Cilia/metabolism
7.
Curr Biol ; 28(15): 2479-2486.e4, 2018 08 06.
Article in English | MEDLINE | ID: mdl-30057305

ABSTRACT

Organ development depends on the integration of coordinated long-range communication between cells. The cerebrospinal fluid composition and flow properties regulate several aspects of central nervous system development, including progenitor proliferation, neurogenesis, and migration [1-3]. One understudied component of the cerebrospinal fluid, described over a century ago in vertebrates, is the Reissner fiber. This extracellular thread forming early in development results from the assembly of the SCO-spondin protein in the third and fourth brain ventricles and central canal of the spinal cord [4]. Up to now, the function of the Reissner fiber has remained elusive, partly due to the lack of genetic invalidation models [4]. Here, by mutating the scospondin gene, we demonstrate that the Reissner fiber is critical for the morphogenesis of a straight posterior body axis. In zebrafish mutants where the Reissner fiber is lost, ciliogenesis and cerebrospinal fluid flow are intact but body axis morphogenesis is impaired. Our results also explain the frequently observed phenotype that mutant embryos with defective cilia exhibit defects in body axis curvature. Here, we reveal that these mutants systematically fail to assemble the Reissner fiber. We show that cilia promote the formation of the Reissner fiber and that the fiber is necessary for proper body axis morphogenesis. Our study sets the stage for future investigations of the mechanisms linking the Reissner fiber to the control of body axis curvature during vertebrate development.


Subject(s)
Body Patterning/physiology , Cerebrospinal Fluid/metabolism , Cilia/physiology , Zebrafish/embryology , Animals , Cell Adhesion Molecules, Neuronal/genetics , Cell Adhesion Molecules, Neuronal/metabolism , Mutation , Zebrafish/growth & development
8.
Sci Rep ; 7(1): 719, 2017 04 07.
Article in English | MEDLINE | ID: mdl-28389647

ABSTRACT

Chemical and mechanical cues from the cerebrospinal fluid (CSF) can affect the development and function of the central nervous system (CNS). How such cues are detected and relayed to the CNS remains elusive. Cerebrospinal fluid-contacting neurons (CSF-cNs) situated at the interface between the CSF and the CNS are ideally located to convey such information to local networks. In the spinal cord, these GABAergic neurons expressing the PKD2L1 channel extend an apical extension into the CSF and an ascending axon in the spinal cord. In zebrafish and mouse spinal CSF-cNs originate from two distinct progenitor domains characterized by distinct cascades of transcription factors. Here we ask whether these neurons with different developmental origins differentiate into cells types with different functional properties. We show in zebrafish larva that the expression of specific markers, the morphology of the apical extension and axonal projections, as well as the neuronal targets contacted by CSF-cN axons, distinguish the two CSF-cN subtypes. Altogether our study demonstrates that the developmental origins of spinal CSF-cNs give rise to two distinct functional populations of sensory neurons. This work opens novel avenues to understand how these subtypes may carry distinct functions related to development of the spinal cord, locomotion and posture.


Subject(s)
Cerebrospinal Fluid/metabolism , Neurons/physiology , Signal Transduction , Spinal Cord/cytology , Spinal Cord/physiology , Animals , Animals, Genetically Modified , Axons/physiology , Axons/ultrastructure , Biomarkers , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cell Differentiation , Fluorescent Antibody Technique , Ganglia, Spinal , Homozygote , Mutation , Neurons/ultrastructure , Sensory Receptor Cells/physiology , Sensory Receptor Cells/ultrastructure , Spinal Nerve Roots , TRPP Cation Channels , Zebrafish , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism
9.
Development ; 142(8): 1492-501, 2015 Apr 15.
Article in English | MEDLINE | ID: mdl-25813543

ABSTRACT

Organ shaping and patterning depends on the coordinated regulation of multiple processes. The Drosophila compound eye provides an excellent model to study the coordination of cell fate and cell positioning during morphogenesis. Here, we find that loss of vav oncogene function during eye development is associated with a disorganised retina characterised by the presence of additional cells of all types. We demonstrate that these defects result from two distinct roles of Vav. First, and in contrast to its well-established role as a positive effector of the EGF receptor (EGFR), we show that readouts of the EGFR pathway are upregulated in vav mutant larval eye disc and pupal retina, indicating that Vav antagonises EGFR signalling during eye development. Accordingly, decreasing EGFR signalling in vav mutant eyes restores retinal organisation and rescues most vav mutant phenotypes. Second, using live imaging in the pupal retina, we observe that vav mutant cells do not form stable adherens junctions, causing various defects, such as recruitment of extra primary pigment cells. In agreement with this role in junction dynamics, we observe that these phenotypes can be exacerbated by lowering DE-Cadherin or Cindr levels. Taken together, our findings establish that Vav acts at multiple times during eye development to prevent excessive cell recruitment by limiting EGFR signalling and by regulating junction dynamics to ensure the correct patterning and morphogenesis of the Drosophila eye.


Subject(s)
Adherens Junctions/metabolism , ErbB Receptors/metabolism , Eye/metabolism , Proto-Oncogene Proteins c-vav/metabolism , Animals , Body Patterning/genetics , Body Patterning/physiology , Cadherins/genetics , Cadherins/metabolism , Drosophila , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , ErbB Receptors/genetics , Eye/embryology , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Morphogenesis/genetics , Morphogenesis/physiology , Proto-Oncogene Proteins c-vav/genetics , Signal Transduction/genetics , Signal Transduction/physiology
10.
Dev Cell ; 25(5): 534-46, 2013 Jun 10.
Article in English | MEDLINE | ID: mdl-23707736

ABSTRACT

Planar cell rearrangements control epithelial tissue morphogenesis and cellular pattern formation. They lead to the formation of new junctions whose length and stability determine the cellular pattern of tissues. Here, we show that during Drosophila wing development the loss of the tumor suppressor PTEN disrupts cell rearrangements by preventing the lengthening of newly formed junctions that become unstable and keep on rearranging. We demonstrate that the failure to lengthen and to stabilize is caused by the lack of a decrease of Myosin II and Rho-kinase concentration at the newly formed junctions. This defect results in a heterogeneous cortical contractility at cell junctions that disrupts regular hexagonal pattern formation. By identifying PTEN as a specific regulator of junction lengthening and stability, our results uncover how a homogenous distribution of cortical contractility along the cell cortex is restored during cell rearrangement to control the formation of epithelial cellular pattern.


Subject(s)
Drosophila Proteins/metabolism , Epithelium/embryology , Gene Expression Regulation, Developmental , Intercellular Junctions/metabolism , PTEN Phosphohydrolase/metabolism , Wings, Animal/embryology , Animals , Crosses, Genetic , Drosophila melanogaster/embryology , Epithelial Cells/cytology , Epithelium/pathology , Green Fluorescent Proteins/metabolism , Morphogenesis , Mutation , Myosin Type II/metabolism
11.
Science ; 336(6082): 724-7, 2012 May 11.
Article in English | MEDLINE | ID: mdl-22499807

ABSTRACT

During animal development, several planar cell polarity (PCP) pathways control tissue shape by coordinating collective cell behavior. Here, we characterize by means of multiscale imaging epithelium morphogenesis in the Drosophila dorsal thorax and show how the Fat/Dachsous/Four-jointed PCP pathway controls morphogenesis. We found that the proto-cadherin Dachsous is polarized within a domain of its tissue-wide expression gradient. Furthermore, Dachsous polarizes the myosin Dachs, which in turn promotes anisotropy of junction tension. By combining physical modeling with quantitative image analyses, we determined that this tension anisotropy defines the pattern of local tissue contraction that contributes to shaping the epithelium mainly via oriented cell rearrangements. Our results establish how tissue planar polarization coordinates the local changes of cell mechanical properties to control tissue morphogenesis.


Subject(s)
Cadherins/metabolism , Cell Adhesion Molecules/metabolism , Cell Polarity , Drosophila Proteins/metabolism , Drosophila melanogaster/growth & development , Membrane Glycoproteins/metabolism , Morphogenesis , Animals , Anisotropy , Cadherins/genetics , Cell Adhesion Molecules/genetics , Cell Shape , Drosophila Proteins/genetics , Drosophila melanogaster/cytology , Drosophila melanogaster/genetics , Drosophila melanogaster/metabolism , Epithelial Cells/cytology , Epithelial Cells/metabolism , Intercellular Junctions/metabolism , Intercellular Junctions/physiology , Membrane Glycoproteins/genetics , Metamorphosis, Biological , Models, Biological , Myosins/metabolism , Pupa/growth & development , Pupa/metabolism , Recombinant Fusion Proteins/metabolism , Signal Transduction , Thorax/cytology , Thorax/growth & development , Thorax/metabolism
12.
Development ; 138(14): 3021-31, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21693518

ABSTRACT

Epithelial homeostasis and the avoidance of diseases such as cancer require the elimination of defective cells by apoptosis. Here, we investigate how loss of apical determinants triggers apoptosis in the embryonic epidermis of Drosophila. Transcriptional profiling and in situ hybridisation show that JNK signalling is upregulated in mutants lacking Crumbs or other apical determinants. This leads to transcriptional activation of the pro-apoptotic gene reaper and to apoptosis. Suppression of JNK signalling by overexpression of Puckered, a feedback inhibitor of the pathway, prevents reaper upregulation and apoptosis. Moreover, removal of endogenous Puckered leads to ectopic reaper expression. Importantly, disruption of the basolateral domain in the embryonic epidermis does not trigger JNK signalling or apoptosis. We suggest that apical, not basolateral, integrity could be intrinsically required for the survival of epithelial cells. In apically deficient embryos, JNK signalling is activated throughout the epidermis. Yet, in the dorsal region, reaper expression is not activated and cells survive. One characteristic of these surviving cells is that they retain discernible adherens junctions despite the apical deficit. We suggest that junctional integrity could restrain the pro-apoptotic influence of JNK signalling.


Subject(s)
Apoptosis/physiology , Drosophila/embryology , Epidermis/physiology , Gene Expression Regulation, Developmental/physiology , JNK Mitogen-Activated Protein Kinases/metabolism , Signal Transduction/physiology , Adherens Junctions/physiology , Animals , Drosophila Proteins/metabolism , Epidermal Cells , Gene Expression Profiling , Gene Expression Regulation, Developmental/genetics , In Situ Hybridization , Microarray Analysis , Phosphoprotein Phosphatases/metabolism , Signal Transduction/genetics
13.
Med Sci (Paris) ; 25(3): 253-7, 2009 Mar.
Article in French | MEDLINE | ID: mdl-19361388

ABSTRACT

Our understanding of organ growth control during development has recently been given a boost by the discovery of the Hippo signalling pathway in Drosophila. This phosphorylation cascade is required for imaginal disc, the organ precursors, to stop growing at the end of larval life; indeed, mutations in the genes encoding the kinases of this pathway, or in their interactors, lead to organ overgrowth. The Hippo pathway acts in repressing the transcription of target genes promoting proliferation and survival. This pathway is thought to integrate many upstream signals, although this is only partially understood. Altogether, integration of these inputs enables a tight control of cell number within organs and hence of organ size. As this pathway is conserved in mammals, it offers new research opportunities to better understand and fight cancer.


Subject(s)
Drosophila Proteins/physiology , Drosophila/growth & development , Intracellular Signaling Peptides and Proteins/physiology , Protein Serine-Threonine Kinases/physiology , Animals , Apoptosis/physiology , Cell Division , Cell Survival , Drosophila/genetics , Drosophila Proteins/genetics , Gene Expression Regulation, Developmental , Intracellular Signaling Peptides and Proteins/genetics , Protein Serine-Threonine Kinases/genetics , Signal Transduction , Transcription, Genetic
14.
Proc Natl Acad Sci U S A ; 105(37): 13901-5, 2008 Sep 16.
Article in English | MEDLINE | ID: mdl-18779587

ABSTRACT

There is a growing interest in the mechanisms that control the apoptosis cascade during development and adult life. To investigate the regulatory events that trigger apoptosis in whole tissues, we have devised a genetically encoded caspase sensor that can be detected in live and fixed tissue by standard confocal microscopy. The sensor comprises two fluorophores, mRFP, monomeric red fluorescent protein (mRFP) and enhanced green fluorescent protein (eGFP), that are linked by an efficient and specific caspase-sensitive site. Upon caspase activation, the sensor is cleaved and eGFP translocates to the nucleus, leaving mRFP at membranes. This is detected before other markers of apoptosis, including anti-cleaved caspase 3 immunoreactivity. Moreover, the sensor does not perturb normal developmental apoptosis and is specific, as cleavage does not occur in Drosophila embryos that are unable to activate the apoptotic cascade. Importantly, dying cells can be recognized in live embryos, thus opening the way for in vivo imaging. As expected from the high conservation of caspases, it is also cleaved in dying cells of chick embryos. It is therefore likely to be generally useful to track the spatiotemporal pattern of caspase activity in a variety of species.


Subject(s)
Caspases/metabolism , Luminescent Measurements/methods , Animals , Caspases/genetics , Cell Line , Cell Survival , Chickens , Drosophila melanogaster/embryology , Drosophila melanogaster/enzymology , Embryo, Nonmammalian/embryology , Embryo, Nonmammalian/enzymology , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Spine/enzymology , Substrate Specificity , Red Fluorescent Protein
15.
Dev Biol ; 321(2): 310-8, 2008 Sep 15.
Article in English | MEDLINE | ID: mdl-18692780

ABSTRACT

Developmental boundaries ensure that cells fated to participate in a particular structure are brought together or maintained at the appropriate locale within developing embryos. Parasegment grooves mark the position of boundaries that separate every segment of the Drosophila embryo into anterior and posterior compartments. Here, we dissect the genetic hierarchy that controls the formation of this morphological landmark. We report that primary segment polarity genes (engrailed, hedgehog and wingless) are not involved in specifying the position of parasegment grooves. Wingless signalling plays only a permissive role by triggering the formation of grooves at cellular interfaces defined by the ON/OFF state of expression of the earlier acting pair-rule genes eve and ftz. We suggest that the transcription factors encoded by these genes activate two programmes in parallel: a cell fate programme mediated by segment polarity genes and a boundary/epithelial integrity programme mediated by unknown target genes.


Subject(s)
Body Patterning/physiology , Drosophila Proteins/metabolism , Drosophila/embryology , Homeodomain Proteins/metabolism , Signal Transduction/physiology , Transcription Factors/metabolism , Animals , Cell Polarity/physiology , In Situ Hybridization , Wnt1 Protein/metabolism
16.
PLoS Genet ; 3(11): e188, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17997606

ABSTRACT

Nuclear receptors (NRs) are transcription factors that are implicated in several biological processes such as embryonic development, homeostasis, and metabolic diseases. To study the role of NRs in development, it is critically important to know when and where individual genes are expressed. Although systematic expression studies using reverse transcriptase PCR and/or DNA microarrays have been performed in classical model systems such as Drosophila and mouse, no systematic atlas describing NR involvement during embryonic development on a global scale has been assembled. Adopting a systems biology approach, we conducted a systematic analysis of the dynamic spatiotemporal expression of all NR genes as well as their main transcriptional coregulators during zebrafish development (101 genes) using whole-mount in situ hybridization. This extensive dataset establishes overlapping expression patterns among NRs and coregulators, indicating hierarchical transcriptional networks. This complete developmental profiling provides an unprecedented examination of expression of NRs during embryogenesis, uncovering their potential function during central nervous system and retina formation. Moreover, our study reveals that tissue specificity of hormone action is conferred more by the receptors than by their coregulators. Finally, further evolutionary analyses of this global resource led us to propose that neofunctionalization of duplicated genes occurs at the levels of both protein sequence and RNA expression patterns. Altogether, this expression database of NRs provides novel routes for leading investigation into the biological function of each individual NR as well as for the study of their combinatorial regulatory circuitry within the superfamily.


Subject(s)
Gene Expression Profiling , Gene Expression Regulation, Developmental , Receptors, Cytoplasmic and Nuclear/genetics , Zebrafish/embryology , Zebrafish/genetics , Animals , Brain/embryology , Brain/metabolism , DNA, Complementary , Embryo, Nonmammalian/embryology , Gene Duplication , Humans , In Situ Hybridization , Phylogeny , Retina/embryology , Retina/metabolism , Retinoid X Receptors/genetics , Sequence Analysis, DNA , Sequence Analysis, Protein
17.
Trends Endocrinol Metab ; 17(4): 166-71, 2006.
Article in English | MEDLINE | ID: mdl-16580224

ABSTRACT

Through studies in mammalian model systems, the estrogen-receptor-related receptor (ERR) alpha, an orphan nuclear receptor, has been shown to interfere with estrogen signaling and might therefore be an interesting pharmaceutical target in estrogen-related diseases. ERRalpha is also involved in energy storage and consumption, and its modulation might be of relevance in the treatment of obesity and diabetes. Recent data have also been published on the effects of this receptor, as well as other members of the ERR family, in non-mammalian animal model systems. Besides indications concerning their mechanisms of action, this analysis demonstrated a role for ERRalpha in controlling cellular movements, and suggested that ERRs might be implicated in a more subtle range of processes than originally envisioned.


Subject(s)
Receptors, Estrogen/physiology , Animals , Brain/metabolism , Cell Differentiation , Cell Division , Drosophila melanogaster , Energy Metabolism , Gene Expression , Models, Animal , Muscles/metabolism , Receptors, Estrogen/antagonists & inhibitors , Receptors, Estrogen/genetics
18.
Evol Dev ; 7(3): 223-33, 2005.
Article in English | MEDLINE | ID: mdl-15876195

ABSTRACT

Summary The evolutionary origin of vertebrate hindbrain segmentation is unclear since the amphioxus, the closest living invertebrate relative to the vertebrates, possesses a hindbrain homolog that displays no gross morphological segmentation. Three of the estrogen-receptor related (ERR) receptors are segmentally expressed in the zebrafish hindbrain, suggesting that their common ancestor was expressed in a similar, reiterated manner. We have also cloned and determined the developmental expression of the single homolog of the vertebrate ERR genes in the amphioxus (AmphiERR). This gene is also expressed in a segmented manner in a region considered homologous to the vertebrate hindbrain. In contrast to the expression of amphioxus islet (a LIM-homeobox gene that also labels motoneurons), AmphiERR expression persists longer in the hindbrain homolog and does not later extend to additional posterior cells. In addition, AmphiERR and one of its vertebrate homologs (ERRalpha) are expressed in the developing somitic musculature of amphioxus and zebrafish, respectively. Altogether, our results are consistent with fine structural evidence suggesting that the amphioxus hindbrain is segmented, and indicate that chordate ERR gene expression is a marker for both hindbrain and muscle segmentation. Furthermore, our data support an evolution model of chordate brain segmentation: originally, the program for anterior segmentation in the protochordate ancestors of the vertebrates resided in the developing axial mesoderm which imposed reiterated patterning on the adjacent neural tube; during early vertebrate evolution, this segmentation program was transferred to and controlled by the neural tube.


Subject(s)
Biological Evolution , Chordata, Nonvertebrate/genetics , Gene Expression Regulation, Developmental , Receptors, Estrogen/chemistry , Receptors, Estrogen/genetics , Rhombencephalon/embryology , Zebrafish/genetics , Amino Acid Sequence , Animals , Chordata, Nonvertebrate/embryology , Molecular Sequence Data , Phylogeny , Receptors, Cytoplasmic and Nuclear/chemistry , Receptors, Cytoplasmic and Nuclear/genetics , Rhombencephalon/metabolism , Sequence Alignment , Zebrafish/embryology , Zebrafish Proteins/chemistry , Zebrafish Proteins/genetics , ERRalpha Estrogen-Related Receptor
19.
Dev Biol ; 281(1): 102-11, 2005 May 01.
Article in English | MEDLINE | ID: mdl-15848392

ABSTRACT

Gastrulation is a process involving cellular commitment and movements whereby the three fundamental germ layers are established in vertebrates embryos. Estrogen Receptor-Related (ERR) alpha is a nuclear receptor displaying high sequence identity to the Estrogen Receptors (ERs). However, ERRalpha is unable to bind and to be regulated by estrogens or any natural ligand to date. Whereas recent studies have suggested roles for ERRalpha in bone and adipose tissue metabolism in the mouse, little is known about its roles during embryonic development. In zebrafish embryos, ERRalpha is expressed from the beginning of gastrulation at the margin of the blastoderm that represents the presumptive mesendoderm. Using loss of function (morpholinos or a dominant-negative version of the protein) and gain of function (mRNA injection) strategies, we show here that ERRalpha is involved in epiboly and convergent-extension (CE) processes in the zebrafish. Altogether, these results propose ERRalpha as a new regulator of morphogenetic movement during gastrulation, independently of cell fate determination.


Subject(s)
Gastrula/physiology , Morphogenesis/physiology , Receptors, Cytoplasmic and Nuclear/metabolism , Receptors, Estrogen/metabolism , Zebrafish Proteins/metabolism , Zebrafish/embryology , Animals , In Situ Hybridization , Mice , Oligonucleotides, Antisense/genetics , Oligonucleotides, Antisense/metabolism , Random Allocation , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Estrogen/genetics , Zebrafish Proteins/genetics , ERRalpha Estrogen-Related Receptor
20.
Dev Genes Evol ; 214(5): 240-9, 2004 May.
Article in English | MEDLINE | ID: mdl-15088146

ABSTRACT

Estrogen-receptor related receptors (ERRalpha, beta and gamma) are so-called orphan (i.e. for which no natural ligand has been identified to date) nuclear receptors that are closely related to the estrogen receptors. To gain insights into the possible functions of ERRs during early development, we have cloned their homologs in the zebrafish. Five err cDNA types were recovered in a PCR screen. Transient transfection experiments indicated that zebrafish ERRalpha, ERRgamma and ERRdelta display transcriptional activities that are identical to those of their mammalian counterparts. The expression patterns of err genes were determined during zebrafish development. Tissues such as the hindbrain or the pronephric tubes express several errs whereas others, such as the presumptive mesoderm at the level of the margin, specifically express a single err. Our analysis also points to tissues in which err expression is conserved through evolution, such as slow muscles that specifically express erralpha, suggesting important functions in these tissues.


Subject(s)
Cloning, Molecular , Gene Expression Regulation, Developmental , Receptors, Estrogen/genetics , Zebrafish/genetics , Amino Acid Sequence , Animals , Molecular Sequence Data , Phylogeny , Receptors, Cytoplasmic and Nuclear , Zebrafish/metabolism
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