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1.
Autophagy ; 18(3): 496-517, 2022 03.
Article in English | MEDLINE | ID: mdl-34130600

ABSTRACT

Primary dysfunction of autophagy due to Mendelian defects affecting core components of the autophagy machinery or closely related proteins have recently emerged as an important cause of genetic disease. This novel group of human disorders may present throughout life and comprises severe early-onset neurodevelopmental and more common adult-onset neurodegenerative disorders. Early-onset (or congenital) disorders of autophagy often share a recognizable "clinical signature," including variable combinations of neurological, neuromuscular and multisystem manifestations. Structural CNS abnormalities, cerebellar involvement, spasticity and peripheral nerve pathology are prominent neurological features, indicating a specific vulnerability of certain neuronal populations to autophagic disturbance. A typically biphasic disease course of late-onset neurodegeneration occurring on the background of a neurodevelopmental disorder further supports a role of autophagy in both neuronal development and maintenance. Additionally, an associated myopathy has been characterized in several conditions. The differential diagnosis comprises a wide range of other multisystem disorders, including mitochondrial, glycogen and lysosomal storage disorders, as well as ciliopathies, glycosylation and vesicular trafficking defects. The clinical overlap between the congenital disorders of autophagy and these conditions reflects the multiple roles of the proteins and/or emerging molecular connections between the pathways implicated and suggests an exciting area for future research. Therapy development for congenital disorders of autophagy is still in its infancy but may result in the identification of molecules that target autophagy more specifically than currently available compounds. The close connection with adult-onset neurodegenerative disorders highlights the relevance of research into rare early-onset neurodevelopmental conditions for much more common, age-related human diseases.Abbreviations: AC: anterior commissure; AD: Alzheimer disease; ALR: autophagic lysosomal reformation; ALS: amyotrophic lateral sclerosis; AMBRA1: autophagy and beclin 1 regulator 1; AMPK: AMP-activated protein kinase; ASD: autism spectrum disorder; ATG: autophagy related; BIN1: bridging integrator 1; BPAN: beta-propeller protein associated neurodegeneration; CC: corpus callosum; CHMP2B: charged multivesicular body protein 2B; CHS: Chediak-Higashi syndrome; CMA: chaperone-mediated autophagy; CMT: Charcot-Marie-Tooth disease; CNM: centronuclear myopathy; CNS: central nervous system; DNM2: dynamin 2; DPR: dipeptide repeat protein; DVL3: disheveled segment polarity protein 3; EPG5: ectopic P-granules autophagy protein 5 homolog; ER: endoplasmic reticulum; ESCRT: homotypic fusion and protein sorting complex; FIG4: FIG4 phosphoinositide 5-phosphatase; FTD: frontotemporal dementia; GBA: glucocerebrosidase; GD: Gaucher disease; GRN: progranulin; GSD: glycogen storage disorder; HC: hippocampal commissure; HD: Huntington disease; HOPS: homotypic fusion and protein sorting complex; HSPP: hereditary spastic paraparesis; LAMP2A: lysosomal associated membrane protein 2A; MEAX: X-linked myopathy with excessive autophagy; mHTT: mutant huntingtin; MSS: Marinesco-Sjoegren syndrome; MTM1: myotubularin 1; MTOR: mechanistic target of rapamycin kinase; NBIA: neurodegeneration with brain iron accumulation; NCL: neuronal ceroid lipofuscinosis; NPC1: Niemann-Pick disease type 1; PD: Parkinson disease; PtdIns3P: phosphatidylinositol-3-phosphate; RAB3GAP1: RAB3 GTPase activating protein catalytic subunit 1; RAB3GAP2: RAB3 GTPase activating non-catalytic protein subunit 2; RB1: RB1-inducible coiled-coil protein 1; RHEB: ras homolog, mTORC1 binding; SCAR20: SNX14-related ataxia; SENDA: static encephalopathy of childhood with neurodegeneration in adulthood; SNX14: sorting nexin 14; SPG11: SPG11 vesicle trafficking associated, spatacsin; SQSTM1: sequestosome 1; TBC1D20: TBC1 domain family member 20; TECPR2: tectonin beta-propeller repeat containing 2; TSC1: TSC complex subunit 1; TSC2: TSC complex subunit 2; UBQLN2: ubiquilin 2; VCP: valosin-containing protein; VMA21: vacuolar ATPase assembly factor VMA21; WDFY3/ALFY: WD repeat and FYVE domain containing protein 3; WDR45: WD repeat domain 45; WDR47: WD repeat domain 47; WMS: Warburg Micro syndrome; XLMTM: X-linked myotubular myopathy; ZFYVE26: zinc finger FYVE-type containing 26.


Subject(s)
Autism Spectrum Disorder , Frontotemporal Dementia , Neurodegenerative Diseases , Adaptor Proteins, Signal Transducing/metabolism , Adult , Autism Spectrum Disorder/metabolism , Autophagy/genetics , Autophagy-Related Proteins/metabolism , Carrier Proteins , Endoplasmic Reticulum/metabolism , Flavoproteins/metabolism , Frontotemporal Dementia/metabolism , Glycogen/metabolism , Humans , Lysosomes/metabolism , Nerve Tissue Proteins , Neurodegenerative Diseases/genetics , Neurodegenerative Diseases/metabolism , Phosphoric Monoester Hydrolases/metabolism , Proteins/metabolism , Vacuolar Proton-Translocating ATPases , Vesicular Transport Proteins , rab3 GTP-Binding Proteins
2.
Bio Protoc ; 11(13): e4079, 2021 Jul 05.
Article in English | MEDLINE | ID: mdl-34327276

ABSTRACT

Chronic pain is a complex disease that affects a large proportion of the population. With little to no effective treatments currently available for patients, this malady presents a large burden to society. Drosophila melanogaster has been previously used to describe conserved molecular components of nociception in larvae and adults. However, adult assays tend to rely on avoidance behaviours, and whilst larval acute thermal avoidance assays exist, larvae are not best suited to a chronic pain scenario as the condition must be long-term. Therefore, an adult thermal nociception response assay was required to study injury-evoked changes in heat nociception threshold (allodynia and hyperalgesia) over time, and we describe such a protocol here. Following leg amputation, flies display increased thermal sensitivity (allodynia) to innocuous temperatures but not an increase in magnitude of response (hyperalgesia) to noxious heat. Our method allows for individualised analysis of both allodynia and hyperalgesia.

3.
Sci Rep ; 9(1): 16155, 2019 11 06.
Article in English | MEDLINE | ID: mdl-31695130

ABSTRACT

Autophagy is a lysosomal degradation pathway that plays an essential role in neuronal homeostasis and is perturbed in many neurological diseases. Transcriptional downregulation of fat was previously observed in a Drosophila model of the polyglutamine disease Dentatorubral-pallidoluysian atrophy (DRPLA) and this was shown to be partially responsible for autophagy defects and neurodegeneration. However, it is still unclear whether a downregulation of mammalian Fat orthologues is associated with neurodegeneration in mice. We hereby show that all four Fat orthologues are transcriptionally downregulated in the cerebellum in a mouse model of DRPLA. To elucidate the possible roles of single Fat genes, this study concentrates on Fat3. This fat homologue is shown to be the most widely expressed in the brain. Conditional knockout (KO) of Fat3 in brains of adult mice was attempted using the inducible Thy1Cre(ERT2) SLICK H line. Behavioral and biochemical analysis revealed that mice with conditional KO of Fat3 in the brain display no abnormalities. This may be ascribed either to the limited efficiency of the KO strategy pursued or to the lack of effect of Fat3 KO on autophagy.


Subject(s)
Ataxia/genetics , Brain/metabolism , Cadherins/genetics , Disease Models, Animal , Heredodegenerative Disorders, Nervous System/genetics , Myoclonic Epilepsies, Progressive/genetics , Nerve Tissue Proteins/genetics , Animals , Ataxia/metabolism , Autophagy , Cadherins/biosynthesis , Cadherins/deficiency , Cerebellum/metabolism , Down-Regulation , Genes, Synthetic , Heredodegenerative Disorders, Nervous System/metabolism , Hippo Signaling Pathway , Integrases/genetics , Mice , Mice, Inbred Strains , Mice, Knockout , Myoclonic Epilepsies, Progressive/metabolism , Nerve Tissue Proteins/biosynthesis , Olfactory Bulb/metabolism , Organ Specificity , Promoter Regions, Genetic/genetics , Protein Serine-Threonine Kinases/metabolism , Recombinant Fusion Proteins/metabolism , Thy-1 Antigens/genetics
4.
Trends Cell Biol ; 29(4): 323-338, 2019 04.
Article in English | MEDLINE | ID: mdl-30665736

ABSTRACT

In multicellular organisms, cell death is an essential aspect of life. Over the past decade, the spectrum of different forms of regulated cell death (RCD) has expanded dramatically with relevance in several pathologies such as inflammatory and neurodegenerative diseases. This has been paralleled by the growing awareness of the central importance of autophagy as a stress response that influences decisions of cell life and cell death. Here, we first introduce criteria and methodologies for correct identification of the different RCD forms. We then discuss how the autophagy machinery is directly associated with specific cell death forms and dissect the complex interactions between autophagy and apoptotic and necrotic cell death. This highlights how the balance of the relationship between other cell death pathways and autophagy presides over life and death in specific cellular contexts.


Subject(s)
Autophagy , Regulated Cell Death , Animals , Humans , Neurodegenerative Diseases/pathology
5.
Autophagy ; 14(4): 722-723, 2018.
Article in English | MEDLINE | ID: mdl-29388501

ABSTRACT

Macroautophagy/autophagy influences onset and progression of several human neurodegenerative diseases, because of its critical role as a regulator of neuronal proteostasis and organelle quality control. In many neurodegenerative diseases, impairment in autophagy is thought to play a fundamental part in the terminal phases of cellular degeneration and death. However, the ultimate mechanism of neuronal cell death remains elusive. In a recent study we have identified a new form of regulated cell death, which arises upon autophagy inhibition.


Subject(s)
Autophagy/physiology , Cell Death/physiology , Neurodegenerative Diseases/metabolism , Neurons/metabolism , Humans
6.
Curr Biol ; 27(23): 3626-3642.e6, 2017 Dec 04.
Article in English | MEDLINE | ID: mdl-29174892

ABSTRACT

The terminal stages of neuronal degeneration and death in neurodegenerative diseases remain elusive. Autophagy is an essential catabolic process frequently failing in neurodegeneration. Selective autophagy routes have recently emerged, including nucleophagy, defined as degradation of nuclear components by autophagy. Here, we show that, in a mouse model for the polyglutamine disease dentatorubral-pallidoluysian atrophy (DRPLA), progressive acquirement of an ataxic phenotype is linked to severe cerebellar cellular pathology, characterized by nuclear degeneration through nucleophagy-based LaminB1 degradation and excretion. We find that canonical autophagy is stalled in DRPLA mice and in human fibroblasts from patients of DRPLA. This is evidenced by accumulation of p62 and downregulation of LC3-I/II conversion as well as reduced Tfeb expression. Chronic autophagy blockage in several conditions, including DRPLA and Vici syndrome, an early-onset autolysosomal pathology, leads to the activation of alternative clearance pathways including Golgi membrane-associated and nucleophagy-based LaminB1 degradation and excretion. The combination of these alternative pathways and canonical autophagy blockade, results in dramatic nuclear pathology with disruption of the nuclear organization, bringing about terminal cell atrophy and degeneration. Thus, our findings identify a novel progressive mechanism for the terminal phases of neuronal cell degeneration and death in human neurodegenerative diseases and provide a link between autophagy block, activation of alternative pathways for degradation, and excretion of cellular components.


Subject(s)
Autophagy , Cerebellum/pathology , Lysosomes/metabolism , Myoclonic Epilepsies, Progressive/physiopathology , Adolescent , Animals , Ataxia , Child, Preschool , Female , Fibroblasts , Humans , Lamin Type B/genetics , Lamin Type B/metabolism , Male , Mice , Mice, Transgenic , Middle Aged , Myoclonic Epilepsies, Progressive/genetics , Phenotype
8.
Nat Commun ; 8: 15451, 2017 05 16.
Article in English | MEDLINE | ID: mdl-28508897

ABSTRACT

Biomphalaria snails are instrumental in transmission of the human blood fluke Schistosoma mansoni. With the World Health Organization's goal to eliminate schistosomiasis as a global health problem by 2025, there is now renewed emphasis on snail control. Here, we characterize the genome of Biomphalaria glabrata, a lophotrochozoan protostome, and provide timely and important information on snail biology. We describe aspects of phero-perception, stress responses, immune function and regulation of gene expression that support the persistence of B. glabrata in the field and may define this species as a suitable snail host for S. mansoni. We identify several potential targets for developing novel control measures aimed at reducing snail-mediated transmission of schistosomiasis.


Subject(s)
Biomphalaria/genetics , Biomphalaria/parasitology , Genome , Schistosomiasis mansoni/transmission , Animal Communication , Animals , Biomphalaria/immunology , DNA Transposable Elements , Evolution, Molecular , Fresh Water , Gene Expression Regulation , Host-Parasite Interactions , Pheromones , Proteome , Schistosoma mansoni , Sequence Analysis, DNA , Stress, Physiological
9.
J Neurochem ; 137(5): 756-69, 2016 06.
Article in English | MEDLINE | ID: mdl-26896818

ABSTRACT

Endocrine fibroblast growth factor 23 (FGF23) is predominantly secreted by osteocytes and facilitates renal phosphate excretion. However, FGF23 is also present in cerebrospinal fluid. In chronic kidney disease, FGF23 serum levels are excessively elevated and associated with learning and memory deficits. Structural plasticity of the hippocampus such as formation of new synapses or an altered dendritic arborization comprises a cellular and morphological correlate of memory formation. Therefore, we hypothesize that FGF23 alters hippocampal neuron morphology and synapses. To address this, we prepared primary murine hippocampal cultures and incubated them with recombinant FGF23 alone or together with a soluble isoform of its co-receptor α-Klotho. Neuronal expression of a fluorescent reporter allowed for a detailed evaluation of the neuronal morphology by Sholl analysis. Additionally, we evaluated synaptic density, identified by stainings, for synaptic markers. We show an enhanced number of primary neurites combined with a reduced arborization, resulting in a less complex morphology of neurons treated with FGF23. Moreover, FGF23 enhances the synaptic density in a FGF-receptor (FGF-R) dependent manner. Finally, we addressed the corresponding signaling events downstream of FGF-R employing a combination of western blots and quantitative immunofluorescence. Interestingly, FGF23 induces phospholipase Cγ activity in primary hippocampal neurons. Co-application of soluble α-Klotho leads to activation of the Akt-pathway and modifies FGF23-impact on neuronal morphology and synaptic density. Compared with other FGFs, this alternative signaling pattern is a possible reason for differential effects of FGF23 on hippocampal neurons and may thereby contribute to learning and memory deficits in chronic kidney disease patients. In this study, we show that fibroblast growth factor 23 inhibits neuronal ramification and enhances the synaptic density in primary hippocampal cultures accompanied by phospholipase Cγ-activation. Co-application of the co-receptor α-Klotho leads to an Akt-activation and further modifies neuronal morphology and number of synapses. Those effects provide a mechanistic basis for memory deficits in patients suffering from chronic kidney disease (CKD) characterized by excessively elevated FGF23 levels as well as memory deficits.


Subject(s)
Fibroblast Growth Factors/pharmacology , Hippocampus/cytology , Hippocampus/drug effects , Neurons/drug effects , Synapses/drug effects , Animals , Cells, Cultured , Fibroblast Growth Factor-23 , Hippocampus/physiology , Male , Mice , Mice, Inbred C57BL , Neurons/physiology , Signal Transduction/drug effects , Signal Transduction/physiology , Synapses/physiology
10.
Dev Comp Immunol ; 57: 20-30, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26608112

ABSTRACT

LBPs (lipopolysaccharide binding proteins) and BPIs (bactericidal permeability increasing proteins) are important proteins involved in defense against bacterial pathogens. We recently discovered a novel biocidal activity of a LBP/BPI from the gastropod Biomphalaria glabrata and demonstrated its role in parental immune protection of eggs, highlighting the importance of LBP/BPIs in invertebrate immunity. Here we characterize four additional LBP/BPI from B. glabrata, presenting conserved sequence architecture and exon-intron structure. Searches of invertebrate genomes revealed that existence of LBP/BPIs is not a conserved feature since they are absent from phyla such as arthropods and platyhelminths. Analyses of LBP/BPI transcripts from selected mollusk species showed recent parallel duplications in some species, including B. glabrata. In this snail species, LBP/BPI members vary in their expression tissue localization as well as their change in expression levels after immune challenges (Gram-negative bacterium; Gram-positive bacterium or yeast). These results, together with the predicted protein features provide evidences of functional specialization of LBP/BPI family members in molluscs.


Subject(s)
Acute-Phase Proteins/metabolism , Antimicrobial Cationic Peptides/metabolism , Bacterial Infections/immunology , Blood Proteins/metabolism , Carrier Proteins/metabolism , Membrane Glycoproteins/metabolism , Mycoses/immunology , Snails/immunology , Acute-Phase Proteins/genetics , Animals , Antimicrobial Cationic Peptides/genetics , Biological Evolution , Blood Proteins/genetics , Carrier Proteins/genetics , Conserved Sequence , Gene Duplication , Immunity , Invertebrates , Membrane Glycoproteins/genetics , Organ Specificity , Species Specificity , Transcriptome
11.
Curr Biol ; 25(14): 1898-903, 2015 Jul 20.
Article in English | MEDLINE | ID: mdl-26119751

ABSTRACT

Aphids attack virtually all plant species and cause serious crop damages in agriculture. Despite their dramatic impact on food production, little is known about the molecular processes that allow aphids to exploit their host plants. To date, few aphid salivary proteins have been identified that are essential for aphid feeding, and their nature and function remain largely unknown. Here, we show that a macrophage migration inhibitory factor (MIF) is secreted in aphid saliva. In vertebrates, MIFs are important pro-inflammatory cytokines regulating immune responses. MIF proteins are also secreted by parasites of vertebrates, including nematodes, ticks, and protozoa, and participate in the modulation of host immune responses. The finding that a plant parasite secretes a MIF protein prompted us to question the role of the cytokine in the plant-aphid interaction. We show here that expression of MIF genes is crucial for aphid survival, fecundity, and feeding on a host plant. The ectopic expression of aphid MIFs in leaf tissues inhibits major plant immune responses, such as the expression of defense-related genes, callose deposition, and hypersensitive cell death. Functional complementation analyses in vivo allowed demonstrating that MIF1 is the member of the MIF protein family that allows aphids to exploit their host plants. To our knowledge, this is the first report of a cytokine that is secreted by a parasite to modulate plant immune responses. Our findings suggest a so-far unsuspected conservation of infection strategies among parasites of animal and plant species.


Subject(s)
Aphids/genetics , Herbivory , Insect Proteins/genetics , Macrophage Migration-Inhibitory Factors/genetics , Plant Immunity , Vicia faba/immunology , Amino Acid Sequence , Animals , Aphids/metabolism , Gene Expression Regulation , Insect Proteins/chemistry , Insect Proteins/metabolism , Macrophage Migration-Inhibitory Factors/chemistry , Macrophage Migration-Inhibitory Factors/metabolism , Molecular Sequence Data , Plant Leaves , Saliva/chemistry , Sequence Alignment
12.
PLoS Pathog ; 9(12): e1003792, 2013.
Article in English | MEDLINE | ID: mdl-24367257

ABSTRACT

Vertebrate females transfer antibodies via the placenta, colostrum and milk or via the egg yolk to protect their immunologically immature offspring against pathogens. This evolutionarily important transfer of immunity is poorly documented in invertebrates and basic questions remain regarding the nature and extent of parental protection of offspring. In this study, we show that a lipopolysaccharide binding protein/bactericidal permeability increasing protein family member from the invertebrate Biomphalaria glabrata (BgLBP/BPI1) is massively loaded into the eggs of this freshwater snail. Native and recombinant proteins displayed conserved LPS-binding, antibacterial and membrane permeabilizing activities. A broad screening of various pathogens revealed a previously unknown biocidal activity of the protein against pathogenic water molds (oomycetes), which is conserved in human BPI. RNAi-dependent silencing of LBP/BPI in the parent snails resulted in a significant reduction of reproductive success and extensive death of eggs through oomycete infections. This work provides the first functional evidence that a LBP/BPI is involved in the parental immune protection of invertebrate offspring and reveals a novel and conserved biocidal activity for LBP/BPI family members.


Subject(s)
Acute-Phase Proteins/metabolism , Antimicrobial Cationic Peptides/metabolism , Biomphalaria , Blood Proteins/metabolism , Carrier Proteins/metabolism , Immunity, Maternally-Acquired , Infections/immunology , Membrane Glycoproteins/metabolism , Oomycetes , Zygote , Acute-Phase Proteins/genetics , Acute-Phase Proteins/pharmacology , Animals , Antimicrobial Cationic Peptides/genetics , Antimicrobial Cationic Peptides/pharmacology , Biomphalaria/genetics , Biomphalaria/immunology , Biomphalaria/metabolism , Biomphalaria/parasitology , Blood Proteins/genetics , Blood Proteins/pharmacology , Carrier Proteins/genetics , Carrier Proteins/pharmacology , Cell Membrane/drug effects , Cell Membrane/metabolism , Cell Membrane Permeability/drug effects , Cloning, Molecular , Escherichia coli/drug effects , Escherichia coli/growth & development , Escherichia coli/metabolism , Escherichia coli/ultrastructure , Female , Immunity, Maternally-Acquired/genetics , Infections/genetics , Infections/metabolism , Membrane Glycoproteins/genetics , Membrane Glycoproteins/pharmacology , Microbial Sensitivity Tests , Oomycetes/drug effects , Oomycetes/immunology , Oomycetes/pathogenicity , Recombinant Proteins/pharmacology , Zygote/immunology , Zygote/metabolism , Zygote/parasitology
13.
PLoS One ; 8(4): e61187, 2013.
Article in English | MEDLINE | ID: mdl-23593426

ABSTRACT

Aedes aegypti is the principal vector of Dengue viruses worldwide. We identified field collected insects with differential susceptibility to Dengue-2 virus (DENv-2) and used isofemale selection to establish susceptible and refractory strains based on midgut infection barriers. Previous experiments had identified higher expression of apoptosis-related genes in the refractory strain. To identify potential molecular mechanisms associated with DENv susceptibility, we evaluated the differential expression of Caspase-16, Aedronc, Aedredd, Inhibitor of apoptosis (AeIAP1) and one member of the RNAi pathway, Argonaute-2 in the midguts and fat body tissues of the selected strains at specific times post blood feeding or infection with DENv-2. In the refractory strain there was significantly increased expression of caspases in midgut and fatbody tissues in the presence of DENv-2, compared to exposure to blood alone, and significantly higher caspase expression in the refractory strain compared with the susceptible strain at timepoints when DENv was establishing in these tissues. We used RNAi to knockdown gene expression; knockdown of AeIAP1 was lethal to the insects. In the refractory strain, knockdown of the pro-apoptotic gene Aedronc increased the susceptibility of refractory insects to DENv-2 from 53% to 78% suggesting a contributing role of this gene in the innate immune response of the refractory strain.


Subject(s)
Aedes/genetics , Apoptosis/genetics , Dengue Virus/pathogenicity , Aedes/virology , Animals , Base Sequence , DNA Primers , Gene Knockdown Techniques , RNA Interference , Real-Time Polymerase Chain Reaction
14.
J Comp Neurol ; 520(17): 3949-61, 2012 Dec 01.
Article in English | MEDLINE | ID: mdl-22592787

ABSTRACT

Fibroblast growth factor 2 (FGF-2) is an important neurotrophic factor that promotes survival of adult mesencephalic dopaminergic (mDA) neurons and regulates their adequate development. Since mDA neurons degenerate in Parkinson's disease, a comprehensive understanding of their development and maintenance might contribute to the development of causative therapeutic approaches. The current analysis addressed the role of FGF-2 in mDA axonal outgrowth, pathway formation, and innervation of respective forebrain targets using organotypic explant cocultures of ventral midbrain (VM) and forebrain (FB). An enhanced green fluorescent protein (EGFP) transgenic mouse strain was used for the VM explants, which allowed combining and distinguishing of individual VM and FB tissue from wildtype and FGF-2-deficient embryonic day (E)14.5 embryos, respectively. These cocultures provided a suitable model to study the role of target-derived FB and intrinsic VM-derived FGF-2. In fact, we show that loss of FGF-2 in both FB and VM results in significantly increased mDA fiber outgrowth compared to wildtype cocultures, proving a regulatory role of FGF-2 during nigrostriatal wiring. Further, we found in heterogeneous cocultures deficient for FGF-2 in FB and VM, respectively, similar phenotypes with wider fiber tracts compared to wildtype cocultures and shorter fiber outgrowth distance than cocultures completely deficient for FGF-2. Additionally, the loss of target-derived FGF-2 in FB explants resulted in decreased caudorostral glial migration. Together these findings imply an intricate interplay of target-derived and VM-derived FGF signaling, which assures an adequate nigrostriatal pathway formation and target innervation.


Subject(s)
Corpus Striatum/metabolism , Fibroblast Growth Factor 2/metabolism , Neural Pathways/metabolism , Neurogenesis/physiology , Substantia Nigra/metabolism , Animals , Coculture Techniques , Immunohistochemistry , Mice , Mice, Inbred C57BL , Mice, Transgenic
15.
J Biol Chem ; 287(24): 19827-40, 2012 Jun 08.
Article in English | MEDLINE | ID: mdl-22514272

ABSTRACT

Experiments in mice deficient for Nurr1 or expressing the dominant-negative FGF receptor (FGFR) identified orphan nuclear receptor Nurr1 and FGFR1 as essential factors in development of mesencephalic dopaminergic (mDA) neurons. FGFR1 affects brain cell development by two distinct mechanisms. Activation of cell surface FGFR1 by secreted FGFs stimulates proliferation of neural progenitor cells, whereas direct integrative nuclear FGFR1 signaling (INFS) is associated with an exit from the cell cycle and neuronal differentiation. Both Nurr1 and INFS activate expression of neuronal genes, such as tyrosine hydroxylase (TH), which is the rate-limiting enzyme in dopamine synthesis. Here, we show that nuclear FGFR1 and Nurr1 are expressed in the nuclei of developing TH-positive cells in the embryonic ventral midbrain. Both nuclear receptors were effectively co-immunoprecipitated from the ventral midbrain of FGF-2-deficient embryonic mice, which previously showed an increase of mDA neurons and enhanced nuclear FGFR1 accumulation. Immunoprecipitation and co-localization experiments showed the presence of Nurr1 and FGFR1 in common nuclear protein complexes. Fluorescence recovery after photobleaching and chromatin immunoprecipitation experiments demonstrated the Nurr1-mediated shift of nuclear FGFR1-EGFP mobility toward a transcriptionally active population and that both Nurr1 and FGFR1 bind to a common region in the TH gene promoter. Furthermore, nuclear FGFR1 or its 23-kDa FGF-2 ligand (FGF-2(23)) enhances Nurr1-dependent activation of the TH gene promoter. Transcriptional cooperation of FGFR1 with Nurr1 was confirmed on isolated Nurr1-binding elements. The proposed INFS/Nurr1 nuclear partnership provides a novel mechanism for TH gene regulation in mDA neurons and a potential therapeutic target in neurodevelopmental and neurodegenerative disorders.


Subject(s)
Cell Nucleus/metabolism , Dopaminergic Neurons/metabolism , Mesencephalon/metabolism , Nerve Tissue Proteins/metabolism , Nuclear Receptor Subfamily 4, Group A, Member 2/metabolism , Receptor, Fibroblast Growth Factor, Type 1/metabolism , Signal Transduction/physiology , Animals , Cell Line , Cell Nucleus/genetics , Dopaminergic Neurons/cytology , Mesencephalon/cytology , Mice , Mice, Knockout , Nerve Tissue Proteins/genetics , Nuclear Receptor Subfamily 4, Group A, Member 2/genetics , Receptor, Fibroblast Growth Factor, Type 1/genetics , Response Elements/physiology , Transcription, Genetic/physiology , Tyrosine 3-Monooxygenase/biosynthesis
16.
J Neurochem ; 122(1): 94-105, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22537018

ABSTRACT

Fibroblast growth factor 2 (FGF-2) is a neurotrophic factor participating in regulation of proliferation, differentiation, apoptosis and neuroprotection in the central nervous system. With regard to dopaminergic (DA) neurons of substantia nigra pars compacta (SNpc), which degenerate in Parkinson's disease, FGF-2 improves survival of mature DA neurons in vivo and regulates expansion of DA progenitors in vitro. To address the physiological role of FGF-2 in SNpc development, embryonic (E14.5), newborn (P0) and juvenile (P28) FGF-2-deficient mice were investigated. Stereological quantification of DA neurons identified normal numbers in the ventral tegmental area, whereas the SNpc of FGF-2-deficient mice displayed a 35% increase of DA neurons at P0 and P28, but not at earlier stage E14.5. Examination of DA marker gene expression by quantitative RT-PCR and in situ hybridization revealed a normal patterning of embryonic ventral mesencephalon. However, an increase of proliferating Lmx1a DA progenitors in the subventricular zone of the ventral mesencephalon of FGF-2-deficient embryos indicated altered cell cycle progression of neuronal progenitors. Increased levels of nuclear FgfR1 in E14.5 FGF-2-deficient mice suggest alterations of integrative nuclear FgfR1 signaling (INFS). In summary, FGF-2 restricts SNpc DA neurogenesis in vivo during late stages of embryonic development.


Subject(s)
Dopaminergic Neurons/physiology , Fibroblast Growth Factor 2/metabolism , Gene Expression Regulation, Developmental/genetics , Substantia Nigra/cytology , Ventral Tegmental Area/cytology , Age Factors , Animals , Animals, Newborn , Body Patterning/genetics , Bromodeoxyuridine , Cell Count , Cell Death/genetics , Embryo, Mammalian , Fibroblast Growth Factor 2/deficiency , LIM-Homeodomain Proteins/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Neurogenesis/genetics , Receptor, Fibroblast Growth Factor, Type 1/metabolism , Signal Transduction/genetics , Substantia Nigra/embryology , Substantia Nigra/growth & development , Transcription Factors/metabolism , Tyrosine 3-Monooxygenase/metabolism , Ventral Tegmental Area/embryology , Ventral Tegmental Area/growth & development
17.
PLoS One ; 7(3): e32512, 2012.
Article in English | MEDLINE | ID: mdl-22427848

ABSTRACT

Our present understanding of the functioning and evolutionary history of invertebrate innate immunity derives mostly from studies on a few model species belonging to ecdysozoa. In particular, the characterization of signaling pathways dedicated to specific responses towards fungi and Gram-positive or Gram-negative bacteria in Drosophila melanogaster challenged our original view of a non-specific immunity in invertebrates. However, much remains to be elucidated from lophotrochozoan species. To investigate the global specificity of the immune response in the fresh-water snail Biomphalaria glabrata, we used massive Illumina sequencing of 5'-end cDNAs to compare expression profiles after challenge by Gram-positive or Gram-negative bacteria or after a yeast challenge. 5'-end cDNA sequencing of the libraries yielded over 12 millions high quality reads. To link these short reads to expressed genes, we prepared a reference transcriptomic database through automatic assembly and annotation of the 758,510 redundant sequences (ESTs, mRNAs) of B. glabrata available in public databases. Computational analysis of Illumina reads followed by multivariate analyses allowed identification of 1685 candidate transcripts differentially expressed after an immune challenge, with a two fold ratio between transcripts showing a challenge-specific expression versus a lower or non-specific differential expression. Differential expression has been validated using quantitative PCR for a subset of randomly selected candidates. Predicted functions of annotated candidates (approx. 700 unisequences) belonged to a large extend to similar functional categories or protein types. This work significantly expands upon previous gene discovery and expression studies on B. glabrata and suggests that responses to various pathogens may involve similar immune processes or signaling pathways but different genes belonging to multigenic families. These results raise the question of the importance of gene duplication and acquisition of paralog functional diversity in the evolution of specific invertebrate immune responses.


Subject(s)
Biomphalaria/genetics , Biomphalaria/immunology , Gene Expression Regulation/immunology , Immunity, Innate/genetics , Signal Transduction/immunology , Animals , Biomphalaria/microbiology , Calmodulin/genetics , Cluster Analysis , DNA, Complementary/genetics , Expressed Sequence Tags/metabolism , Ferritins/genetics , Gene Expression Profiling , Gene Expression Regulation/genetics , High-Throughput Nucleotide Sequencing , Phylogeny , RNA, Messenger/metabolism , Receptors, Pattern Recognition/genetics , Signal Transduction/genetics , Zinc Fingers/genetics
18.
Cell Transplant ; 21(4): 749-62, 2012.
Article in English | MEDLINE | ID: mdl-21929871

ABSTRACT

Exogenous cell replacement represents a potent treatment option for Parkinson's disease. However, the low survival rate of transplanted dopaminergic neurons (DA) calls for methodological improvements. Here we evaluated a method to combine transient genetic modification of neuronal progenitor cells with an optimized cell culture protocol prior to intrastriatal transplantation into 6-hydroxydopamine (6-OHDA) unilateral lesioned rats. Plasmid-based delivery of brain-derived neurotrophic factor (BDNF) increases the number of DA neurons, identified by tyrosine hydroxylase immunoreactivity (TH-ir), by 25% in vitro, compared to enhanced green fluorescence protein (EGFP)-transfected controls. However, the nucleofection itself, especially the cell detachment and reseeding procedure, decreases the TH-ir neuron number to 40% compared with nontransfected control cultures. To circumvent this drawback we established the colayer method, which contains a mix of nucleofected cells reseeded on top of an adherent sister culture in a ratio 1:3. In this setup TH-ir neuron number remains high and could be further increased by 25% after BDNF transfection. Comparison of both cell culture procedures (standard and colayer) after intrastriatal transplantation revealed a similar DA neuron survival as seen in vitro. Two weeks after grafting TH-ir neuron number was strongly reduced in animals receiving the standard EGFP-transfected cells (271 ± 62) compared to 1,723 ± 199 TH-ir neurons in the colayer group. In contrast to the in vitro results, no differences in the number of grafted TH-ir neurons were observed between BDNF, EGFP, and nontransfected colayer groups, neither 2 nor 13 weeks after transplantation. Likewise, amphetamine and apomorphine-induced rotational behavior improved similarly over time in all groups. Nevertheless, the colayer protocol provides an efficient way for neurotrophic factor release by transplanted progenitor cells and will help to study the effects of candidate factors on survival and integration of transplanted DA neurons.


Subject(s)
Mesencephalon/cytology , Oxidopamine/adverse effects , Parkinson Disease/therapy , Stem Cell Transplantation/methods , Stem Cells/cytology , Animals , Blotting, Western , Brain-Derived Neurotrophic Factor/genetics , Brain-Derived Neurotrophic Factor/metabolism , Cells, Cultured , Dopaminergic Neurons/cytology , Dopaminergic Neurons/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Rats , Rats, Sprague-Dawley , Stem Cells/metabolism
19.
PLoS One ; 6(8): e23564, 2011.
Article in English | MEDLINE | ID: mdl-21876757

ABSTRACT

Secreted proteins of the fibroblast growth factor (FGF) family play important roles during development of various organ systems. A detailed knowledge of their temporal and spatial expression profiles, especially of closely related FGF family members, are essential to further identification of specific functions in distinct tissues. In the central nervous system dopaminergic neurons of the substantia nigra and their axonal projections into the striatum progressively degenerate in Parkinson's disease. In contrast, FGF-2 deficient mice display increased numbers of dopaminergic neurons. In this study, we determined the expression profiles of all 22 FGF-ligands and 10 FGF-receptor isoforms, in order to clarify, if FGF-2 deficiency leads to compensatory up-regulation of other FGFs in the nigrostriatal system. Three tissues, ventral mesencephalon (VM), striatum (STR) and as reference tissue spinal cord (SC) of wild-type and FGF-2 deficient mice at four developmental stages E14.5, P0, P28, and adult were comparatively analyzed by quantitative RT-PCR. As no differences between the genotypes were observed, a compensatory up-regulation can be excluded. Moreover, this analysis revealed that the majority of FGF-ligands (18/22) and FGF-receptors (9/10) are expressed during normal development of the nigrostriatal system and identified dynamic changes for some family members. By comparing relative expression level changes to SC reference tissue, general alterations in all 3 tissues, such as increased expression of FGF-1, -2, -22, FgfR-2c, -3c and decreased expression of FGF-13 during postnatal development were identified. Further, specific changes affecting only one tissue, such as increased FGF-16 (STR) or decreased FGF-17 (VM) expression, or two tissues, such as decreased expression of FGF-8 (VM, STR) and FGF-15 (SC, VM) were found. Moreover, 3 developmentally down-regulated FGFs (FGF-8b, FGF-15, FGF-17a) were functionally characterized by plasmid-based over-expression in dissociated E11.5 VM cell cultures, however, such a continuous exposure had no influence on the yield of dopaminergic neurons in vitro.


Subject(s)
Fibroblast Growth Factor 2/deficiency , Gene Expression Regulation, Developmental , Receptors, Fibroblast Growth Factor/metabolism , Substantia Nigra/growth & development , Substantia Nigra/metabolism , Animals , Databases, Genetic , Dopaminergic Neurons/cytology , Dopaminergic Neurons/metabolism , Fibroblast Growth Factor 2/metabolism , In Situ Hybridization , Ligands , Mice , Mice, Inbred C57BL , Receptors, Fibroblast Growth Factor/genetics
20.
J Insect Sci ; 10: 41, 2010.
Article in English | MEDLINE | ID: mdl-20572793

ABSTRACT

Suppressive subtractive hybridization was used to evaluate the differential expression of midgut genes of feral populations of Aedes aegypti (Diptera: Culicidae) from Colombia that are naturally refractory or susceptible to Dengue-2 virus infection. A total of 165 differentially expressed sequence tags (ESTs) were identified in the subtracted libraries. The analysis showed a higher number of differentially expressed genes in the susceptible Ae. aegypti individuals than the refractory mosquitoes. The functional annotation of ESTs revealed a broad response in the susceptible library that included immune molecules, metabolic molecules and transcription factors. In the refractory strain, there was the presence of a trypsin inhibitor gene, which could play a role in the infection. These results serve as a template for more detailed studies aiming to characterize the genetic components of refractoriness, which in turn can be used to devise new approaches to combat transmission of dengue fever.


Subject(s)
Aedes/metabolism , Aedes/virology , Dengue Virus/physiology , Digestive System/metabolism , Gene Expression Regulation/physiology , Animals , Expressed Sequence Tags , Gene Expression Profiling , Gene Library
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