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1.
Sci Adv ; 8(51): eabq2202, 2022 12 21.
Article in English | MEDLINE | ID: mdl-36542701

ABSTRACT

The consequences of crowding on the dynamic conformational ensembles of intrinsically disordered proteins (IDPs) remain unresolved because of their ultrafast motion. Here, we report crowder-induced interactions and conformational dynamics of a prototypical multistimuli-responsive IDP, Rec1-resilin. The effects of a range of crowders of varying sizes, forms, topologies, and concentrations were examined using spectroscopic, spectrofluorimetric, and contrast-matching small- and ultrasmall-angle neutron scattering investigation. To achieve sufficient neutron contrast against the crowders, deuterium-labeled Rec1-resilin was biosynthesized successfully. Moreover, the ab initio "shape reconstruction" approach was used to obtain three-dimensional models of the conformational assemblies. The IDP revealed crowder-specific systematic extension and compaction with the level of macromolecular crowding. Last, a robust extension-contraction model has been postulated to capture the fundamental phenomena governing the observed behavior of IDPs. The study provides insights and fresh perspectives for understanding the interactions and structural dynamics of IDPs in crowded states.


Subject(s)
Intrinsically Disordered Proteins , Intrinsically Disordered Proteins/chemistry , Protein Conformation , Macromolecular Substances
2.
Antiviral Res ; 169: 104542, 2019 09.
Article in English | MEDLINE | ID: mdl-31233807

ABSTRACT

An influenza A(H1N1)pdm09 and an influenza B virus were passaged in 3-fluoro(eq)-4-guanidino difluoro sialic acid (3Feq4Gu DFSA), an inhibitor of the influenza neuraminidase (NA) to determine whether resistant variants could be selected. 3Feq4Gu DFSA is a mechanism-based inhibitor, forming a covalent link to Y406 in the NA active site. Given its similarity to the natural substrate, sialic acid, we predicted resistant variants would be difficult to select. Yields of both viruses decreased with passaging, so that after 12 passages both viruses were only growing to low titers. Drug concentrations were decreased for another three passages. There was no difference in NA sensitivity in the MUNANA fluorescence-based assay, nor in plaque assays for the passaged virus stocks. All influenza B plaques were still wild type in all assays. There were isolated small diffuse plaques in the P15 pdm09 stock, which after purification had barely detectable NA or hemagglutinin (HA) activity. These had a novel non-active site I106M substitution in the NA gene, but unexpectedly no HA changes. The I106M may impact NA function through steric effects on the movement of the 150 and 430-loops. The I106M viruses had similar replication kinetics in MDCK cells as wild type viruses, but their ability to bind to and infect CHO-K1 cells expressing high levels of cell-bound mucin was compromised. The I106M substitution was unstable, with progeny rapidly reverting to wild type by three different mechanisms. Some had reverted to I106, some had V106, both with wild type NA and HA properties. A third group retained the I106M, but had a compensating R363K substitution, which regained almost wild type NA properties. These viruses now agglutinated chicken red blood cells (CRBCs) but unlike the I/V106, they rebound after elution at 37 °C. There were no mutations in the HA, but each phenotype correlated with the NA sequence. We propose that the activity in the I106M mutant is insufficient to remove carbohydrates from the virion HA and NA, sterically limiting HA access to CRBC receptors, thus resulting in poor HA binding.


Subject(s)
Antiviral Agents/pharmacology , Influenza A Virus, H1N1 Subtype/drug effects , Influenza, Human/virology , N-Acetylneuraminic Acid/pharmacology , Neuraminidase/antagonists & inhibitors , Animals , CHO Cells , Catalytic Domain , Cell Line , Cricetulus , Dogs , Drug Resistance, Viral/genetics , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Hemagglutinins , Humans , Hymecromone/analogs & derivatives , Influenza A Virus, H1N1 Subtype/genetics , Inhibitory Concentration 50 , Madin Darby Canine Kidney Cells , Mucins , Mutation , Neuraminidase/genetics , Ovum , Phenotype , Viral Proteins/genetics , Virus Replication/drug effects
3.
Antiviral Res ; 153: 95-100, 2018 05.
Article in English | MEDLINE | ID: mdl-29574145

ABSTRACT

We have tested the in vitro susceptibility to the neuraminidase (NA) inhibitors of 96 highly pathogenic clade 2.1 A(H5N1) viruses from Indonesia, isolated between 2008 and 2011. HPAI virus samples obtained through the Influenza Virus Monitoring (IVM) surveillance program in Indonesia were tested for susceptibility to oseltamivir and zanamivir. The NAs of four viruses were identified as extreme outliers to oseltamivir, based on statistical analysis by box plots, with IC50 values ranging from 46 to 62 nM. The NAs of two of these viruses from Sumatra and Aceh, had an N294S substitution, while one virus from Sulawesi had an S246N NA substitution. The NAs of all four viruses showed a specific loss of slow binding to oseltamivir in an IC50 kinetics assay. As observed in our previous surveillance, there was only a minimal effect on the sensitivity to zanamivir or peramivir for these mutants or any of the other isolates tested. The continued circulation of subtype H5N1 viruses in avian species poses an on-going zoonotic threat. The fact that we continue to identify avian isolates with naturally occurring mutations conferring reduced oseltamivir susceptibility remains a concern, given oseltamivir will be a key antiviral in the event of a new pandemic emerging.


Subject(s)
Antiviral Agents/pharmacology , Drug Resistance, Viral , Influenza A Virus, H5N1 Subtype/drug effects , Influenza in Birds/virology , Mutation, Missense , Neuraminidase/genetics , Oseltamivir/pharmacology , Viral Proteins/genetics , Animals , Chickens , Genotype , Indonesia , Influenza A Virus, H5N1 Subtype/genetics , Influenza A Virus, H5N1 Subtype/isolation & purification , Inhibitory Concentration 50 , Microbial Sensitivity Tests
4.
J Med Chem ; 61(5): 1921-1933, 2018 03 08.
Article in English | MEDLINE | ID: mdl-29397718

ABSTRACT

Competitive inhibitors of the influenza neuraminidase (NA) were discovered almost 20 years ago, with zanamivir and oseltamivir licensed globally. These compounds are based on a transition state analogue of the sialic acid substrate. We recently showed that 5- N-(acetylamino)-2,3,5-trideoxy-2,3-difluoro-d-erythro-ß-l-manno-2-nonulopyranosonic acid (DFSA) and its derivatives are also potent inhibitors of the influenza NA. They are mechanism based inhibitors, forming a covalent bond between the C2 of the sugar ring and Y406 in the NA active site, thus inactivating the enzyme. We have now synthesized a series of deoxygenated DFSA derivatives in order to understand the contribution of each hydroxyl in DFSA to binding and inhibition of the influenza NA. We have investigated their relative efficacy in enzyme assays in vitro, in cell culture, and by X-ray crystallography. We found loss of the 8- and 9-OH had the biggest impact on the affinity of binding and antiviral potency.


Subject(s)
Antiviral Agents/chemistry , Influenza, Human/drug therapy , Neuraminidase/chemistry , Antiviral Agents/pharmacology , Crystallography, X-Ray , Enzyme Inhibitors , Humans , Influenza, Human/prevention & control , Structure-Activity Relationship
6.
J Clin Microbiol ; 54(11): 2763-2766, 2016 11.
Article in English | MEDLINE | ID: mdl-27582513

ABSTRACT

We compared two rapid, point-of care nucleic acid amplification tests for detection of influenza A and B viruses (Alere i [Alere] and cobas Liat [Roche Diagnostics]) with the influenza A and B virus test components of the FilmArray respiratory panel (BioFire Diagnostics) using 129 respiratory specimens collected in universal viral transport medium (80 influenza A virus and 16 influenza B virus positive) from both adult and pediatric patients. The sensitivities of the Alere test were 71.3% for influenza A virus and 93.3% for influenza B virus, with specificities of 100% for both viruses. The sensitivities and specificities of the Liat test were 100% for both influenza A and B viruses. The poor sensitivity of the Alere test for detection of influenza A virus was likely due to a study set that included many low-positive samples that were below its limit of detection.


Subject(s)
Influenza A virus/isolation & purification , Influenza B virus/isolation & purification , Influenza, Human/diagnosis , Molecular Diagnostic Techniques/methods , Point-of-Care Systems , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Female , Humans , Infant , Infant, Newborn , Male , Middle Aged , Sensitivity and Specificity , Time Factors , Young Adult
7.
J Vet Emerg Crit Care (San Antonio) ; 26(6): 775-781, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27541206

ABSTRACT

OBJECTIVE: To describe the use of glucagon infusion for adjunctive treatment of hypoglycemia in dogs. DESIGN: Multicenter retrospective case series. SETTING: One university and 1 private veterinary referral hospital. ANIMALS: Dogs were included if they were hospitalized and received glucagon therapy for hypoglycemia, defined as blood glucose concentration (BG) <60 mg/dL. A total of 9 dogs were included from September 2005 to May 2014. INTERVENTIONS: None. MEASUREMENTS AND MAIN RESULTS: The medical record for each eligible case was reviewed. Data recorded included signalment, presenting complaint, underlying disease process, presenting BG, BG after dextrose supplementation, BG before glucagon administration, maximum BG while receiving glucagon, and BG after discontinuation of glucagon, if available. Adverse reactions to glucagon and outcome of case were recorded if available. The most common causative disease was insulinoma (n = 7). Median serum glucose concentration on presentation was 30 mg/dL (20-41 mg/dL). The median bolus of glucagon was 50 ng/kg followed by a median maximum dose of a glucagon CRI of 15 ng/kg/min. The mean time period on glucagon CRI until normoglycemia (defined as BG > 60 mg/dL) was 7 hours. All hypoglycemic patients had improvement of BGs when glucagon was added. Statistically significant differences (P < 0.05) were found between BG measurements on glucagon CRI compared to BG at presentation, BG after dextrose, and BG prior to glucagon with a Friedman statistic of 17.3. A CRI was found to effectively increase the BG without recurrence of hypoglycemia after weaning. The majority of patients (5/9) survived to discharge. CONCLUSION: Glucagon CRI was accompanied by an increase in BG in hypoglycemic dogs. Glucagon CRI appears to be a safe method and can be readily utilized in most practice settings.


Subject(s)
Dog Diseases/drug therapy , Glucagon/therapeutic use , Hypoglycemia/veterinary , Hypoglycemic Agents/therapeutic use , Animals , Blood Glucose , Dog Diseases/blood , Dogs , Female , Glucagon/administration & dosage , Hypoglycemia/blood , Hypoglycemic Agents/administration & dosage , Male , Retrospective Studies
8.
Antiviral Res ; 123: 216-23, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26364554

ABSTRACT

The human parainfluenza virus type 3 (hPIV3) hemagglutinin-neuraminidase (HN) has opposing functions of binding sialic acid receptors and cleaving them, facilitating virus release. The crystal structure of hPIV3 HN complexed with the substrate analogue difluorosialic acid (DFSA) revealed that catalysis by HN involves the formation of a covalently linked sialosyl-enzyme intermediate which was trapped along with a transition-state analogue resembling an oxocarbenium ion. This mechanism of enzyme catalysis was also confirmed in the crystal structure of the influenza N9 neuraminidase complexed with DFSA. Additionally, novel secondary receptor binding sites were identified in the hPIV3 HN-DFSA complex including one near the catalytic cavity which upon binding DFSA imposes subtle changes and may help the HN balance the opposing functions. Multiple receptor binding sites may increase avidity to facilitate cell binding and fusion promotion. The secondary receptor binding sites in the paramyxoviruses are so far unique to each virus type.


Subject(s)
HN Protein/chemistry , HN Protein/metabolism , Parainfluenza Virus 3, Human/enzymology , Sialic Acids/chemistry , Sialic Acids/metabolism , Binding Sites , Biotransformation , Crystallography, X-Ray , Humans , Parainfluenza Virus 3, Human/chemistry , Protein Binding , Protein Conformation
9.
Antiviral Res ; 114: 62-6, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25499124

ABSTRACT

The neuraminidase (NA) inhibitors oseltamivir and zanamivir are administered twice daily for 5days for treatment of influenza. Laninamivir is a 7-methoxy derivative of zanamivir, but a single dose is effective when taken as the laninamivir octanoate prodrug. We show here in IC50 kinetics assays and a solid phase reactivation assay that compared to zanamivir laninamivir also demonstrates slow binding to but slower dissociation from multiple wild type NAs. A D197E mutation in an influenza B and an E119G in an N9 neuraminidase which confer 15- and 150-fold resistance to laninamivir result in faster binding and dissociation. Despite similar IC50s our assays demonstrate more rapid dissociation of laninamivir from clade 1 compared to 2 H5N1 NAs.


Subject(s)
Antiviral Agents/metabolism , Influenza A Virus, H5N1 Subtype/genetics , Influenza A virus/genetics , Influenza B virus/genetics , Neuraminidase/genetics , Neuraminidase/metabolism , Zanamivir/analogs & derivatives , Animals , Antiviral Agents/pharmacology , Dogs , Drug Resistance, Viral/genetics , Guanidines , Influenza A Virus, H5N1 Subtype/drug effects , Influenza A Virus, H5N1 Subtype/enzymology , Influenza A virus/drug effects , Influenza A virus/enzymology , Influenza B virus/drug effects , Influenza B virus/enzymology , Inhibitory Concentration 50 , Madin Darby Canine Kidney Cells , Mutation , Oseltamivir/metabolism , Oseltamivir/pharmacology , Pyrans , Sialic Acids , Viral Proteins/genetics , Viral Proteins/metabolism , Zanamivir/metabolism , Zanamivir/pharmacology
10.
Antiviral Res ; 108: 30-5, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24854981

ABSTRACT

The influenza virus neuraminidase inhibitors are normally slow binding inhibitors, but many mutations leading to resistance, also result in the loss of the slow binding phenotype. Mutations can also affect the rate of dissociation of the inhibitors from the neuraminidase, but the assays to measure this require large amounts of virus and are time consuming. To more fully understand the impacts of mutations on the binding and dissociation of the neuraminidase inhibitors we have developed a solid phase reactivation assay, which can use small amounts of crude virus sample bound to an ELISA plate. Multiple viruses can be assayed simultaneously against multiple inhibitors. Using this assay we have demonstrated differences in the relative rates of dissociation of the inhibitors and reactivation of enzyme activity among different influenza A and B viruses for zanamivir, oseltamivir and peramivir. In general oseltamivir dissociated the fastest, and dissociation of peramivir was much slower than both the other inhibitors. Viruses with H274Y, E119V and E119G mutations demonstrated faster dissociation of the inhibitor to which they were resistant. Dissociation of zanamivir and oseltamivir were faster from the D197E mutant, but not of peramivir.


Subject(s)
Enzyme Inhibitors/metabolism , Neuraminidase/antagonists & inhibitors , Neuraminidase/metabolism , Orthomyxoviridae/enzymology , Viral Proteins/antagonists & inhibitors , Viral Proteins/metabolism , Acids, Carbocyclic , Cyclopentanes/metabolism , Guanidines/metabolism , Kinetics , Mutant Proteins/antagonists & inhibitors , Mutant Proteins/metabolism , Oseltamivir/metabolism , Protein Binding , Zanamivir/metabolism
11.
Maturitas ; 77(4): 375-9, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24602554

ABSTRACT

OBJECTIVE: To identify the proportion of female carers who experience death thoughts and the factors associated with these thoughts, using data from the Australian Longitudinal Study on Women's Health (ALSWH). METHODS: A cross-sectional analysis of the fifth ALSWH survey was conducted. 10,528 middle-aged women provided data on caring and death thoughts, 3077 were carers and 2005 of those were included in the multivariate analysis. RESULTS: 7.1% of female carers had felt life was not worth living in the previous week and were classified as having experienced death thoughts, compared with 5.7% of non-carers (p=.01). Carers with death thoughts had poorer physical and mental health, higher levels of anxiety, lower levels of optimism, and reported less social support (p<.01). In a multivariate model social support, mental health, carer satisfaction, and depressive symptoms significantly predicted death thoughts. Carers with clinically significant depressive symptoms were four times more likely to experience death thoughts than those without. Carers who were satisfied with their role were 50% less likely to have experienced death thoughts than those who were dissatisfied. CONCLUSIONS: A small but significant proportion of female carers experience death thoughts and may be at risk for suicide. These findings add to the growing body of evidence on suicide-related thoughts and behaviours in carers and have implications for health professionals and service providers.


Subject(s)
Caregivers/psychology , Suicidal Ideation , Aged , Anxiety/psychology , Australia , Cross-Sectional Studies , Depression/psychology , Female , Humans , Logistic Models , Longitudinal Studies , Middle Aged , Social Support , Surveys and Questionnaires , Young Adult
12.
PLoS One ; 8(6): e66105, 2013.
Article in English | MEDLINE | ID: mdl-23776615

ABSTRACT

We have tested the susceptibility to neuraminidase inhibitors of 155 clade 2.1 H5N1 viruses from Indonesia, isolated between 2006-2008 as well as 12 clade 1 isolates from Thailand and Cambodia from 2004-2007 using a fluorometric MUNANA-based enzyme inhibition assay. The Thailand and Cambodian clade 1 isolates tested here were all susceptible to oseltamivir and zanamivir, and sequence comparison indicated that reduced oseltamivir susceptibility we observed previously with clade 1 Cambodian isolates correlated with an S246G neuraminidase mutation. Eight Indonesian viruses (5%), all bearing I222 neuraminidase mutations, were identified as mild to extreme outliers for oseltamivir based on statistical analysis by box plots. IC50s were from 50 to 500-fold higher than the reference clade 1 virus from Viet Nam, ranging from 43-75 nM for I222T/V mutants and from 268-349 nM for I222M mutants. All eight viruses were from different geographic locales; all I222M variants were from central Sumatra. None of the H5N1 isolates tested demonstrated reduced susceptibility to zanamivir (IC50s all <5 nM). All I222 mutants showed loss of slow binding specifically for oseltamivir in an IC50 kinetics assay. We identified four other Indonesian isolates with higher IC50s which also demonstrated loss of slow binding, including one virus with an I117V mutation. There was a minimal effect on the binding of zanamivir and peramivir for all isolates tested. As H5N1 remains a potential pandemic threat, the incidence of mutations conferring reduced oseltamivir susceptibility is concerning and emphasizes the need for greater surveillance of drug susceptibility.


Subject(s)
Antiviral Agents/pharmacology , Influenza A Virus, H5N1 Subtype/drug effects , Influenza A Virus, H5N1 Subtype/genetics , Neuraminidase/genetics , Oseltamivir/pharmacology , Drug Resistance, Viral/genetics , Humans , Influenza A Virus, H5N1 Subtype/enzymology , Mutation
13.
J Antimicrob Chemother ; 68(10): 2210-21, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23759505

ABSTRACT

OBJECTIVES: We characterized human H1N1 influenza isolate A/Hokkaido/15/02, which has haemagglutinin and neuraminidase mutations that reduce drug susceptibility to oseltamivir, zanamivir and peramivir. METHODS: One wild-type and three mutant viruses were isolated by plaque purification. Viruses were tested in MUNANA-based enzyme assays, cell culture and receptor binding assays. RESULTS: Two viruses had a neuraminidase Y155H mutation that reduced susceptibility in the enzyme inhibition assay to all inhibitors by 30-fold to >100-fold. The Y155H mutation reduced plaque size and affected the stability, Km and pH activity profile of the enzyme. In contrast to previous mutants, this neuraminidase demonstrated a slower rate of inhibitor binding in the IC50 kinetics assay. One virus had both the Y155H mutation and a haemagglutinin D225G mutation that rescued the small-plaque phenotype of the Y155H virus and affected receptor binding and drug susceptibility in cell culture and binding assays. We also isolated a third mutant virus, with both neuraminidase V114I and haemagglutinin D225N mutations, which affected susceptibility in the enzyme inhibition assay and receptor binding, respectively, but to lesser extents than the Y155H and D225G mutations. CONCLUSIONS: Neither Y155 nor V114 is conserved across neuraminidase subtypes. Furthermore, Y155 is not conserved even among avian and swine N1 viruses. Structurally, both residues reside far from the neuraminidase active site. D225 forms part of the receptor binding site of the haemagglutinin. We believe this is the first demonstration of a specific haemagglutinin mutation correlating with reduced drug susceptibility in plaque assays in both Madin Darby Canine Kidney and SIAT cells.


Subject(s)
Antiviral Agents/pharmacology , Drug Resistance, Viral , Enzyme Inhibitors/pharmacology , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/enzymology , Mutation, Missense , Neuraminidase/genetics , Viral Proteins/genetics , Acids, Carbocyclic , Animals , Cell Line , Cyclopentanes/pharmacology , DNA Mutational Analysis , Guanidines/pharmacology , Humans , Influenza A Virus, H1N1 Subtype/genetics , Influenza A Virus, H1N1 Subtype/isolation & purification , Inhibitory Concentration 50 , Microbial Sensitivity Tests , Oseltamivir/pharmacology , Zanamivir/pharmacology
14.
PLoS One ; 8(3): e58491, 2013.
Article in English | MEDLINE | ID: mdl-23526987

ABSTRACT

Advances in cancer therapy have increased the rate of survival of young cancer patients; however, female lymphoma patients frequently face a temporary or permanent loss of fertility when treated with traditional cytotoxic agents. The potential loss of fertility is an important concern that can influence treatment decisions for many premenopausal cancer patients. The negative effect of chemotherapeutic agents and treatment protocols to patients' fertility-referred to as fertotoxicity-are thus an increasingly important cancer survivorship issue. We have developed a novel nanoscale formulation of arsenic trioxide, a potent drug for treatment of hematological malignancies, and demonstrate that it has significantly better activity in a murine lymphoma model than the free drug. In parallel, we have developed a novel in vitro assay of ovarian follicle function that predicts in vivo ovarian toxicity of therapeutic agents. Our results reveal that the nanotherapeutic agent is not only more active against lymphoma, but is fertoprotective, i.e., it is much less deleterious to ovarian function than the parent drug. Thus, our in vitro assay allows rapid evaluation of both established and experimental anticancer drugs on ovarian reserve and can inform the selection of efficacious and fertility-sparing treatment regimens for reproductive-age women diagnosed with cancer.


Subject(s)
Antineoplastic Agents/administration & dosage , Antineoplastic Agents/adverse effects , Arsenicals/administration & dosage , Arsenicals/adverse effects , Lymphoma/drug therapy , Ovary/drug effects , Oxides/administration & dosage , Oxides/adverse effects , Animals , Arsenic Trioxide , Cell Line, Tumor , Female , Fertility/drug effects , Humans , Lymphoma/physiopathology , Mice , Nanocapsules , Ovarian Follicle/drug effects , Ovarian Follicle/physiopathology , Ovary/physiopathology , Xenograft Model Antitumor Assays
15.
Science ; 340(6128): 71-5, 2013 Apr 05.
Article in English | MEDLINE | ID: mdl-23429702

ABSTRACT

Influenza antiviral agents play important roles in modulating disease severity and in controlling pandemics while vaccines are prepared, but the development of resistance to agents like the commonly used neuraminidase inhibitor oseltamivir may limit their future utility. We report here on a new class of specific, mechanism-based anti-influenza drugs that function through the formation of a stabilized covalent intermediate in the influenza neuraminidase enzyme, and we confirm this mode of action with structural and mechanistic studies. These compounds function in cell-based assays and in animal models, with efficacies comparable to that of the neuraminidase inhibitor zanamivir and with broad-spectrum activity against drug-resistant strains in vitro. The similarity of their structure to that of the natural substrate and their mechanism-based design make these attractive antiviral candidates.


Subject(s)
Antiviral Agents/chemistry , Enzyme Inhibitors/chemistry , Neuraminidase/antagonists & inhibitors , Orthomyxoviridae/drug effects , Sialic Acids/chemistry , Animals , Antiviral Agents/pharmacology , Crystallography, X-Ray , Dogs , Enzyme Inhibitors/pharmacology , Humans , Madin Darby Canine Kidney Cells , Neuraminidase/chemistry , Orthomyxoviridae/enzymology , Oseltamivir/chemistry , Oseltamivir/pharmacology , Protein Conformation , Sialic Acids/pharmacology , Structure-Activity Relationship , Zanamivir/chemistry , Zanamivir/pharmacology
16.
J Antimicrob Chemother ; 67(8): 1874-83, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22563014

ABSTRACT

OBJECTIVES: Pandemic H1N1/09 viruses with the neuraminidase H274Y mutation have emerged in untreated patients or following oseltamivir therapy or prophylaxis. There have been no reports yet of zanamivir-resistant H1N1/09 viruses in previously healthy patients. We wanted to determine whether we could select for neuraminidase mutations conferring high-level resistance to zanamivir by in vitro passage of the virus. We also wanted to investigate if passaging in a combination of zanamivir and oseltamivir could prevent the emergence of the H274Y mutation. METHODS: An H1N1/09 virus was passaged in cell culture in increasing concentrations of either zanamivir or a combination of zanamivir and oseltamivir. RESULTS: Passage in zanamivir selected a virus with N146S neuraminidase and G158E haemagglutinin mutations. The neuraminidase mutation only reduced drug susceptibility by 2-fold in enzyme assays. The haemagglutinin mutation conferred drug dependence and drug resistance in cells to oseltamivir and zanamivir and reduced binding to red blood cells. After four passages in zanamivir and oseltamivir, virus with a D198G neuraminidase mutation was selected with around 10-fold reduced susceptibility to oseltamivir, zanamivir and peramivir in the enzyme assay. Further passaging selected a virus with both D198G and H274Y mutations that was highly resistant to oseltamivir and peramivir, but not zanamivir. All mutations affected growth in cell culture and decreased affinities of the neuraminidases for substrate. CONCLUSIONS: We did not select a virus with a neuraminidase mutation conferring high-level resistance to zanamivir. Dual exposure to zanamivir and oseltamivir was not sufficient to prevent selection of the H274Y mutation.


Subject(s)
Cyclopentanes/pharmacology , Drug Resistance, Viral , Guanidines/pharmacology , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/growth & development , Mutation, Missense , Neuraminidase/genetics , Oseltamivir/pharmacology , Acids, Carbocyclic , Animals , Cells, Cultured , Dogs , Humans , Influenza A Virus, H1N1 Subtype/genetics , Molecular Sequence Data , RNA, Viral/genetics , Selection, Genetic , Sequence Analysis, DNA , Serial Passage , Zanamivir/pharmacology
17.
Adm Policy Ment Health ; 39(4): 225-37, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22246614

ABSTRACT

Schools continue to be an important context for preventive interventions targeting a range of behavioral and mental health problems. Yet competing demands on teachers and shifting priorities in response to federal legislation have posed some unique challenges to prevention researchers working in school settings. This paper summarizes an approach to prevention partnerships developed over a decade and centered on the three-tiered Positive Behavioral Interventions and Supports (PBIS) model. A state-wide initiative was formed and led through a partnership between the Maryland State Department of Education, Sheppard Pratt Health System, and Johns Hopkins University, which focused on implementing evidence-based practices and conducting prevention research in Maryland public schools. Drawing on a community-based participatory research framework for developing research partnerships, we highlight the importance of forming and sustaining authentic relationships to support school-based prevention research and implementation of evidence-based programs. We also discuss how these relationships have been used to disseminate PBIS and rigorously test its effectiveness. We describe some lessons learned from the partnership and identify potential areas for future research on the prevention partnership model. We conclude with a discussion of the implications for both researchers and community partners engaged in translational research in school settings.


Subject(s)
Child Behavior Disorders/prevention & control , Community-Based Participatory Research/organization & administration , Evidence-Based Practice/organization & administration , Schools/organization & administration , Translational Research, Biomedical/organization & administration , Adolescent , Child , Child, Preschool , Cooperative Behavior , Humans , Maryland , Safety
18.
PLoS One ; 6(8): e23627, 2011.
Article in English | MEDLINE | ID: mdl-21858186

ABSTRACT

The influenza neuraminidase (NA) inhibitors zanamivir, oseltamivir and peramivir were all designed based on the knowledge that the transition state analogue of the cleaved sialic acid, 2-deoxy,2,3-dehydro N-acetyl neuraminic acid (DANA) was a weak inhibitor of NA. While DANA bound rapidly to the NA, modifications leading to the improved potency of these new inhibitors also conferred a time dependent or slow binding phenotype. Many mutations in the NA leading to decreased susceptibility result in loss of slow binding, hence this is a phenotypic marker of many but not all resistant NAs. We present here a simplified approach to determine whether an inhibitor is fast or slow binding by extending the endpoint fluorescent enzyme inhibition assay to a real time assay and monitoring the changes in IC(50)s with time. We carried out two reactions, one with a 30 min preincubation with inhibitor and the second without. The enzymatic reaction was started via addition of substrate and IC(50)s were calculated after each 10 min interval up to 60 min. Results showed that without preincubation IC(50)s for the wild type viruses started high and although they decreased continuously over the 60 min reaction time the final IC(50)s remained higher than for pre-incubated samples. These results indicate a slow equilibrium of association and dissociation and are consistent with slow binding of the inhibitors. In contrast, for viruses with decreased susceptibility, preincubation had minimal effect on the IC(50)s, consistent with fast binding. Therefore this modified assay provides additional phenotypic information about the rate of inhibitor binding in addition to the IC(50), and critically demonstrates the differential effect of incubation times on the IC(50) and K(i) values of wild type and mutant viruses for each of the inhibitors.


Subject(s)
Enzyme Assays/methods , Enzyme Inhibitors/pharmacology , Neuraminidase/antagonists & inhibitors , Orthomyxoviridae/drug effects , Viral Proteins/antagonists & inhibitors , Acids, Carbocyclic , Binding, Competitive , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Enzyme Inhibitors/metabolism , Guanidines/metabolism , Guanidines/pharmacology , Humans , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/enzymology , Influenza A Virus, H1N1 Subtype/genetics , Influenza A Virus, H3N2 Subtype/drug effects , Influenza A Virus, H3N2 Subtype/enzymology , Influenza A Virus, H3N2 Subtype/genetics , Influenza A Virus, H5N1 Subtype/drug effects , Influenza A Virus, H5N1 Subtype/enzymology , Influenza A Virus, H5N1 Subtype/genetics , Inhibitory Concentration 50 , Kinetics , Mutation , N-Acetylneuraminic Acid/analogs & derivatives , N-Acetylneuraminic Acid/metabolism , N-Acetylneuraminic Acid/pharmacology , Neuraminidase/metabolism , Orthomyxoviridae/enzymology , Orthomyxoviridae/genetics , Oseltamivir/metabolism , Oseltamivir/pharmacology , Protein Binding , Substrate Specificity , Time Factors , Viral Proteins/metabolism , Zanamivir/metabolism , Zanamivir/pharmacology
19.
PLoS One ; 6(2): e16284, 2011 Feb 07.
Article in English | MEDLINE | ID: mdl-21326879

ABSTRACT

The influenza surface glycoprotein neuraminidase (NA) is essential for the efficient spread of the virus. Antiviral drugs such as Tamiflu (oseltamivir) and Relenza (zanamivir) that inhibit NA enzyme activity have been shown to be effective in the treatment of influenza infections. The recent 'swine flu' pandemic and world-wide emergence of Tamiflu-resistant seasonal human influenza A(H1N1) H(274)Y have highlighted the need for the ongoing development of new anti-virals, efficient production of vaccine proteins and novel diagnostic tools. Each of these goals could benefit from the production of large quantities of highly pure and stable NA. This publication describes a generic expression system for NAs in a baculovirus Expression Vector System (BEVS) that is capable of expressing milligram amounts of recombinant NA. To construct NAs with increased stability, the natural influenza NA stalk was replaced by two different artificial tetramerization domains that drive the formation of catalytically active NA homotetramers: GCN4-pLI from yeast or the Tetrabrachion tetramerization domain from Staphylothermus marinus. Both recombinant NAs are secreted as FLAG-tagged proteins to allow for rapid and simple purification. The Tetrabrachion-based NA showed good solubility, increased stability and biochemical properties closer to the original viral NA than the GCN4-pLI based construct. The expressed quantities and high quality of the purified recombinant NA suggest that this expression system is capable of producing recombinant NA for a broad range of applications including high-throughput drug screening, protein crystallisation, or vaccine development.


Subject(s)
Cloning, Molecular/methods , Influenza A Virus, H1N1 Subtype/enzymology , Influenza A Virus, H1N1 Subtype/genetics , Neuraminidase/genetics , Neuraminidase/isolation & purification , Drug Resistance, Viral/genetics , Gene Expression , Genes, Reporter/genetics , Genes, Reporter/physiology , Genetic Vectors/analysis , Genetic Vectors/genetics , Genetic Vectors/metabolism , Humans , Neuraminidase/metabolism , Phylogeny , Protein Stability , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Solubility
20.
Biol Reprod ; 84(4): 689-97, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21123815

ABSTRACT

Female cancer patients who seek fertility preservation but cannot undergo ovarian stimulation and embryo preservation may consider 1) retrieval of immature oocytes followed by in vitro maturation (IVM) or 2) ovarian tissue cryopreservation followed by transplantation or in vitro follicle culture. Conventional IVM is carried out during the follicular phase of menstrual cycle. There is limited evidence demonstrating that immature oocyte retrieved during the luteal phase can mature in vitro and be fertilized to produce viable embryos. While in vitro follicle culture is successful in rodents, its application in nonhuman primates has made limited progress. The objective of this study was to investigate the competence of immature luteal-phase oocytes from baboon and to determine the effect of follicle-stimulating hormone (FSH) on baboon preantral follicle culture and oocyte maturation in vitro. Oocytes from small antral follicle cumulus-oocyte complexes (COCs) with multiple cumulus layers (42%) were more likely to resume meiosis and progress to metaphase II (MII) than oocytes with a single layer of cumulus cells or less (23% vs. 3%, respectively). Twenty-four percent of mature oocytes were successfully fertilized by intracytoplasmic sperm injection, and 25% of these developed to morula-stage embryos. Preantral follicles were encapsulated in fibrin-alginate-matrigel matrices and cultured to small antral stage in an FSH-independent manner. FSH negatively impacted follicle health by disrupting the integrity of oocyte and cumulus cells contact. Follicles grown in the absence of FSH produced MII oocytes with normal spindle structure. In conclusion, baboon luteal-phase COCs and oocytes from cultured preantral follicles can be matured in vitro. Oocyte meiotic competence correlated positively with the number of cumulus cell layers. This study clarifies the parameters of the follicle culture system in nonhuman primates and provides foundational data for future clinical development as a fertility preservation option for women with cancer.


Subject(s)
Oocytes/cytology , Oocytes/growth & development , Animals , Cryopreservation , Embryo Culture Techniques , Female , Follicle Stimulating Hormone/pharmacology , Humans , Luteal Phase , Meiosis , Models, Animal , Oocytes/drug effects , Ovarian Follicle/cytology , Papio , Sperm Injections, Intracytoplasmic , Tissue Culture Techniques
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