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1.
J Proteomics ; 134: 193-202, 2016 Feb 16.
Article in English | MEDLINE | ID: mdl-26778141

ABSTRACT

Posttranslational modifications and proteolytic processing regulate almost all physiological processes. Dysregulation can potentially result in pathologic protein species causing diseases. Thus, tissue species proteomes of diseased individuals provide diagnostic information. Since the composition of tissue proteomes can rapidly change during tissue homogenization by the action of enzymes released from their compartments, disease specific protein species patterns can vanish. Recently, we described a novel, ultrafast and soft method for cold vaporization of tissue via desorption by impulsive vibrational excitation (DIVE) using a picosecond-infrared-laser (PIRL). Given that DIVE extraction may provide improved access to the original composition of protein species in tissues, we compared the proteome composition of tissue protein homogenates after DIVE homogenization with conventional homogenizations. A higher number of intact protein species was observed in DIVE homogenates. Due to the ultrafast transfer of proteins from tissues via gas phase into frozen condensates of the aerosols, intact protein species were exposed to a lesser extent to enzymatic degradation reactions compared with conventional protein extraction. In addition, total yield of the number of proteins is higher in DIVE homogenates, because they are very homogenous and contain almost no insoluble particles, allowing direct analysis with subsequent analytical methods without the necessity of centrifugation. BIOLOGICAL SIGNIFICANCE: Enzymatic protein modifications during tissue homogenization are responsible for changes of the in-vivo protein species composition. Cold vaporization of tissues by PIRL-DIVE is comparable with taking a snapshot at the time of the laser irradiation of the dynamic changes that occur continuously under in-vivo conditions. At that time point all biomolecules are transferred into an aerosol, which is immediately frozen.


Subject(s)
Infrared Rays , Lasers , Palatine Tonsil/chemistry , Pancreas/chemistry , Proteomics , Specimen Handling , Animals , Humans , Mice , Proteomics/instrumentation , Proteomics/methods , Rats, Wistar , Specimen Handling/instrumentation , Specimen Handling/methods
2.
Br J Cancer ; 112(9): 1519-26, 2015 Apr 28.
Article in English | MEDLINE | ID: mdl-25880010

ABSTRACT

BACKGROUND: Identification of promising biomarkers that predict the prognosis of patients with breast cancer is needed. In this study, we hypothesised that the expression of the epithelial-mesenchymal transition-related biomarker plastin3 (PLS3) in peripheral blood could be a prognostic factor in breast cancer. METHODS: We examined PLS3 expression in breast cancer cell lines with epithelial and mesenchymal traits and in circulating tumour cells (CTCs) obtained from the peripheral blood of breast cancer patients. We investigated PLS3 expression in the peripheral blood of 594 patients with breast cancer to evaluate the clinical significance of PLS3 expression. RESULTS: Robust PLS3 expression was observed in different breast cancer cell lines (Hs578t, MCF-7, MDA-MB-468, and MDA-MB-231) as well as in a bone marrow derived cancer cell line (BC-M1). In both the training (n=298) and validation (n=296) sets, PLS3 expression was observed in CTCs of patients with breast cancer. PLS3-positive patients showed significantly poorer overall and disease-free survival than PLS3-negative patients (P=0.0001 and 0.003, respectively). Subset analysis revealed that this prognostic biomarker was relevant in patients with stage I-III cancer, particularly in patients with luminal-type and triple-negative-type tumours. CONCLUSIONS: These data demonstrated that PLS3 was expressed in CTCs undergoing the epithelial-mesenchymal transition in patients with breast cancer. Furthermore, PLS3 may be an excellent biomarker for identifying groups at risk of recurrence or with a poor prognosis.


Subject(s)
Biomarkers, Tumor/blood , Breast Neoplasms/pathology , Epithelial-Mesenchymal Transition , Membrane Glycoproteins/blood , Microfilament Proteins/blood , Neoplasm Recurrence, Local/pathology , Neoplastic Cells, Circulating/metabolism , Blotting, Western , Breast Neoplasms/blood , Breast Neoplasms/genetics , Breast Neoplasms/mortality , Case-Control Studies , Female , Follow-Up Studies , Humans , Lymphatic Metastasis , Membrane Glycoproteins/biosynthesis , Microfilament Proteins/biosynthesis , Middle Aged , Neoplasm Grading , Neoplasm Invasiveness , Neoplasm Recurrence, Local/blood , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/mortality , Neoplasm Staging , Neoplastic Cells, Circulating/pathology , Prognosis , RNA, Messenger/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Survival Rate
3.
Biosens Bioelectron ; 24(9): 2947-9, 2009 May 15.
Article in English | MEDLINE | ID: mdl-19327977

ABSTRACT

A new type of nanobiodetector based on a limited number of polyaniline nanofibrils has been designed and tested against bacteria Klebsiella pneumoniae, Pseudomonas aeruginosa, Escherichia coli and Enterococcus faecalis. The cells attaching conducting nanofibrils modify locally the electrical conductivity making the polymer nanowires electrically inhomogeneous. The "defects" accumulate in nanofibrils changing suddenly their electrical conductivity above a threshold density (the percolation limit), enabling an easy flow of the charge carriers. The results are unique: the device works like an "ON-OFF" switch with nearly linear response above a threshold number of cells in the suspension examined, which is of an order of 10(5) to 10(6) CFU per 1 ml. Such a behaviour is important for bio-alarm systems, environmental monitoring and medical applications.


Subject(s)
Aniline Compounds/chemistry , Bacterial Adhesion , Biosensing Techniques/methods , Nanostructures/chemistry , Biosensing Techniques/instrumentation , Electric Conductivity , Electrodes , Enterococcus faecalis/physiology , Equipment Design , Escherichia coli/physiology , Klebsiella pneumoniae/physiology , Pseudomonas aeruginosa/physiology , Sensitivity and Specificity
4.
Endocr Relat Cancer ; 12(4): 823-37, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16322324

ABSTRACT

Early placenta insulin-like growth factor (EPIL) is expressed by a subpopulation of the Her2-positive SKBR3 breast cancer cell line displaying high motility and transendothelial invasiveness in vitro, as recently shown by our group. As a consequence of this, we established cellular models by generating an EPIL-overexpressing SKBR3 cell line, knocked down EPIL by adding specific small interfering RNA (siRNA) to those cells and produced EPIL-enriched and depleted serum-free culture media. EPIL-expressing cells as well as EPIL-induced SKBR3 cells acquired a high capacity for transendothelial invasiveness. We observed a thin and outspread morphology caused by enhanced formation of lamellipodia, i.e. protrusions in the initial phase of motility. In parallel, Her2-positive MDAHer2 breast cancer cells also showed increased invasiveness when induced by EPIL-conditioned medium. A downstream signaling impact of EPIL could be observed in the form of reduced phosphorylation of Her2, erk1/2 and akt, while phospholipase Cgamma1 phophorylation remained unaffected. As an in vivo model for highly motile tumor cells, Paget's disease of the nipple showed simultaneous EPIL and Her2 expression upon immunohistochemical examination using specific antibodies. Such experimental data have been translated to a clinical setting by using a prognostic tissue microarray established from 603 breast cancer cases. Survival data analysis found a significant association between expression levels of EPIL and 5-year overall survival that was dose dependent: EPIL (negative) 84%, EPIL (moderately positive) 77%, EPIL (strongly positive) 48% (P < 0.005). One particular subgroup (7.6% of the cases with full clinical records) that comprised tumors simultaneously expressing EPIL and Her2 represented patients with the poorest 5-year overall survival. The results suggested that EPIL might be a cancer cell-produced growth factor that influences lateral Her2 signaling. Moreover, EPIL may be induced by factors apart from Her2 and may independently provide signaling for cancer invasion and motility.


Subject(s)
Autocrine Communication , Breast Neoplasms/diagnosis , Cell Movement , Intercellular Signaling Peptides and Proteins/metabolism , Receptor, ErbB-2/metabolism , Autocrine Communication/genetics , Breast Neoplasms/mortality , Breast Neoplasms/pathology , Cell Line, Tumor , Cell Movement/genetics , Culture Media, Conditioned/pharmacology , Endothelial Cells/drug effects , Endothelial Cells/pathology , Female , Humans , Immunohistochemistry , Intercellular Signaling Peptides and Proteins/analysis , Intercellular Signaling Peptides and Proteins/genetics , Neoplasm Invasiveness , Paget's Disease, Mammary/metabolism , Paget's Disease, Mammary/pathology , Prognosis , Protein Array Analysis , RNA, Small Interfering/genetics , Receptor, ErbB-2/analysis
5.
Appl Microbiol Biotechnol ; 64(2): 250-4, 2004 Apr.
Article in English | MEDLINE | ID: mdl-14586581

ABSTRACT

Phages infecting the industrially important Actinoplanes strain SN223 were isolated from soil samples collected at the shores of inland waters in Germany. The genome sizes range from 53 kb to 58 kb. Preliminary analyses revealed G+C contents comparable with the G/C bias of the host. Electron microscopy of three selected viruses displayed no obvious morphological differences, the phage heads being icosahedral and their tails non-contractible. Two of the phages (phiAsp2, phiAsp3.1) characterized in more detail are capable of provoking putative pseudolysogenic growth of the host bacterium. The carrier state for phiAsp2, in which cells are tightly packed with viruses, was demonstrated by electron microscopy. The latter phage is apparently widely distributed, as it was isolated from regions which are distantly located, i.e. more than 600 km apart from each other.


Subject(s)
Bacteriophages/isolation & purification , Bacteriophages/ultrastructure , Micromonosporaceae/virology , Soil Microbiology , Bacteriolysis , Bacteriophages/genetics , Bacteriophages/physiology , Base Composition , DNA, Viral/analysis , DNA, Viral/chemistry , Electrophoresis, Agar Gel , Genome, Viral , Germany , Lysogeny , Microscopy, Electron , Nucleocapsid/ultrastructure
6.
Monatsschr Kinderheilkd (1902) ; 128(2): 84-8, 1980 Feb.
Article in German | MEDLINE | ID: mdl-7189012

ABSTRACT

Investigations were carried out on boys aged between 8 and 20 years by positive chromatin test. Klinefelter's syndrome was confirmed by karyotype determination in 13 cases. In comparison with the average Polish population the patients' parents were older. The patients were usually the last children to be born in their families. Typical hypogonadism, cryptorchism, especially unilateral, and delay in the development of secondary sex characteristics were observed. Besides typical eunuchoid habitus, endomorphic type of body build, tendency towards obesity or sometimes even delay in growth and a deficiency in body weight were noticed. True gynaecomastia was only present in 1/4 of these patients. Very frequent features of Klinefelter's syndrome are--in the authors' opinion--mental subnormality, inadequate social adaptation and neurotic symptoms. Before adolescence the characteristic phenotype of Klinefelter's syndrome is absent. These results indicate that sex chromatin examination is a general screening test to determine Klinefelter's syndrome in boys.


Subject(s)
Klinefelter Syndrome/psychology , Adaptation, Psychological , Adolescent , Adult , Child , Female , Humans , Intellectual Disability/diagnosis , Intelligence , Karyotyping , Klinefelter Syndrome/diagnosis , Klinefelter Syndrome/epidemiology , Male , Maternal Age , Paternal Age , Phenotype , Poland , Sex Chromatin/analysis
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