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1.
Microbiol Res ; 165(6): 516-22, 2010 Aug 20.
Article in English | MEDLINE | ID: mdl-19879117

ABSTRACT

Polar and non-polar secondary metabolites as well as phenolic compounds of Aspergillus parasiticus grown on hazelnut were analyzed by high-resolution high performance liquid chromatography-mass spectroscopy and fourier transform infrared spectroscopy. Several novel and beneficial compounds such as dibutyl phthalate, pyrogallol, fumagillol, italicic acid and sorbicillin were identified from A. parasiticus for the first time. Some of these compounds have the potential to be used in pharmaceutical industry.


Subject(s)
Aflatoxins/analysis , Aflatoxins/metabolism , Aspergillus/chemistry , Corylus/microbiology , Aspergillus/metabolism , Chromatography, High Pressure Liquid , Mass Spectrometry , Spectroscopy, Fourier Transform Infrared
2.
Food Microbiol ; 26(1): 8-15, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19028298

ABSTRACT

Escherichia coli has been identified as the causative agent in numerous foodborne illness outbreaks associated with the consumption of fresh apple cider. Apple cider has a pH which is normally below 4.0 and would not be considered a medium capable of supporting the growth of foodborne pathogens. The association of unpasteurized apple cider with foodborne illness due to E. coli O157:H7 has however, led to increased interest in potential alternative methods to produce pathogen free cider. Apple cider was prepared from eight different apple cultivars, inoculated with approximately 10(6)-10(7) CFU of three strains of E. coli O157:H7 per ml (933, ATCC 43889, and ATCC 43895) and tested to determine the effectiveness of sulfur dioxide (SO(2)) and dimethyl dicarbonate (DMDC). Bacterial populations for treated and untreated samples were then enumerated by using non-selective media. Eight different ciders were treated with DMDC (125 and 250 ppm) and SO(2) (25, 50, 75, 100 ppm). Greater than a 5-log reduction was achieved at room temperature with 250 ppm of DMDC and 50 ppm of SO(2) after the incubation time of 6h and 24h, respectively. Addition of DMDC and/or SO(2) may offer an inexpensive alternative to thermal pasteurization for the production of safe apple cider for small apple cider producers.


Subject(s)
Beverages/microbiology , Deoxycytidine/analogs & derivatives , Escherichia coli O157/drug effects , Food Preservation/methods , Food Preservatives/pharmacology , Malus/microbiology , Sulfur Dioxide/pharmacology , Colony Count, Microbial , Consumer Product Safety , Deoxycytidine/pharmacology , Dose-Response Relationship, Drug , Escherichia coli O157/growth & development , Food Handling/methods , Food Microbiology , Humans , Hydrogen-Ion Concentration , Temperature , Time Factors
3.
J Food Sci ; 73(6): E243-9, 2008 Aug.
Article in English | MEDLINE | ID: mdl-19241544

ABSTRACT

The dielectric properties must be defined to design efficient radio frequency (RF) and microwave (MW) processes by the food manufacturers. The objective of this study was to understand how frequency, temperature, and muscle fiber orientation influence the dielectric properties. The eye of round (Semitendinosus) muscle was selected because it contains large, relatively uniform muscle cells with similar muscle fiber orientation and relatively uniform chemical composition throughout the tissue. Dielectric properties were measured using an open-ended coaxial probe technique at 27, 915, and 1800 MHz and temperatures between -5 and 130 degrees C. Power penetration depth was calculated. Since many commercially prepared, thermally processed, ready-to-eat entrees are made with frozen meat, dielectric property measurements were started from -5 degrees C. The dielectric constant and dielectric loss factors were often higher for muscle with the muscle fiber measured in a parallel orientation to the probe compared to samples of the same treatment (for example, fresh or frozen) in a perpendicular tissue orientation at the same frequency and temperature. Dielectric constant and loss values for frozen beef tended to be higher than fresh beef at the same temperature and frequency. Tissue orientation appeared to have a greater effect on dielectric loss values at lower frequencies. Penetration depth tended to be greater when the direction of propagation was perpendicular to the muscle fiber.


Subject(s)
Electric Impedance , Food Handling/methods , Food Irradiation , Meat/standards , Muscle Fibers, Skeletal/chemistry , Muscle Fibers, Skeletal/radiation effects , Animals , Cattle , Electric Conductivity , Food Preservation/methods , Meat/radiation effects , Meat Products/radiation effects , Meat Products/standards , Microwaves , Radio Waves , Temperature , Time Factors
4.
J Appl Microbiol ; 90(2): 248-55, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11168728

ABSTRACT

AIMS: The main goal of this study was to characterize the xylanase (xynA) gene from Pichia stipitis NRRL Y-11543. METHODS AND RESULTS: The xylanase gene was cloned into pUC19 in Escherichia coli DH5alphaF' and selected by growth on RBB-xylan. All functional clones contained a recombinant plasmid with an insert of 2.4 kbp, as determined by restriction mapping. The nucleotide sequence of the P. stipitis xylanase gene consisted of 1146 bp and encoded a protein of 381 amino acids with a molecular weight of 43 649 Da. The sequence contained a putative 20-amino acid N-terminal signal sequence and four N-linked glycosylation sites. The Km values for non-glycosylated and glycosylated xylanases were 1.4 mg ml-1 and 4.2 mg ml-1, respectively, and Vmax values were 0.8 and 0.082 micromol min-1 mg-1 protein, respectively. CONCLUSION: Xylanase, a rarely found enzyme in yeast species, has been characterized in detail. SIGNIFICANCE AND IMPACT OF THE STUDY: The results of this study can be used to develop better xylanase-utilizing yeast strains.


Subject(s)
Escherichia coli/enzymology , Pichia/genetics , Xylosidases/genetics , Xylosidases/metabolism , Amino Acid Sequence , Blotting, Western , Cloning, Molecular , Electrophoresis, Polyacrylamide Gel , Escherichia coli/genetics , Molecular Sequence Data , Pichia/enzymology , Sequence Alignment , Sequence Analysis, DNA , Xylan Endo-1,3-beta-Xylosidase , Xylosidases/isolation & purification
5.
Curr Microbiol ; 42(1): 45-8, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11116396

ABSTRACT

Twenty-five strains of Lactococcus lactis subspecies lactis and subspecies cremoris obtained from dairy industry and environmental collections were examined by 16S RNA automated ribotyping profiles and site-specific PCR (S-PCR). By automated ribotyping, the majority of strains were classified in accordance with phenotypic characterization, with the exception of one lactis (220) and two cremoris (BO32 and 140) strains. A complete differentiation of subspecies lactis and cremoris in agreement with conventional phenotypic methods was achieved by S-PCR with a set of site-specific primer pairs (PR1, RM4, and F3) designed particularly from a deletion region found in subspecies cremoris, but not in lactis. Therefore, S-PCR with primers (PR1, RM4, and F3) is a rapid and very sensitive method for the distinction of lactis and cremoris subspecies in dairy production.


Subject(s)
Lactococcus lactis/classification , Lactococcus lactis/genetics , Polymerase Chain Reaction/methods , Ribotyping/methods , DNA Fingerprinting/methods , Phenotype , Phylogeny , RNA, Ribosomal, 16S/genetics
6.
Phytopathology ; 91(10): 966-72, 2001 Oct.
Article in English | MEDLINE | ID: mdl-18944123

ABSTRACT

ABSTRACT Tn5-induced mutations in Agrobacterium vitis F2/5 resulted in both altered grape necrosis and tobacco leaf panel collapse phenotypes, suggesting that the underlying mechanisms of the reactions are related. The reaction on tobacco resembles the classical hypersensitive response (HR) caused by several plant pathogenic bacteria in that it is observable within 14 h, is inhibited by treatment of plants with metabolic inhibitors, and results in the inability to recover the pathogen from the necrotic zone. Strains of A. vitis differ with regard to their efficiency of causing the reaction on tobacco. An EcoRI fragment from one mutant, M6, which is necrosis-altered and HR-minus, was cloned and sequenced. Sequence analysis revealed that the Tn5 insertion occurred in a region that shares significant homology with genes involved in long chain fatty acid production by the marine bacteria Shewanella spp. and Moritella marina. Complementation of M6 with a cosmid clone from an F2/5 DNA library restored the tobacco HR and grape necrosis phenotypes.

7.
Appl Environ Microbiol ; 66(9): 3974-80, 2000 Sep.
Article in English | MEDLINE | ID: mdl-10966417

ABSTRACT

Xylose metabolism, a variable phenotype in strains of Lactococcus lactis, was studied and evidence was obtained for the accumulation of mutations that inactivate the xyl operon. The xylose metabolism operon (xylRAB) was sequenced from three strains of lactococci. Fragments of 4.2, 4.2, and 5.4 kb that included the xyl locus were sequenced from L. lactis subsp. lactis B-4449 (formerly Lactobacillus xylosus), L. lactis subsp. lactis IO-1, and L. lactis subsp. lactis 210, respectively. The two environmental isolates, L. lactis B-4449 and L. lactis IO-1, produce active xylose isomerases and xylulokinases and can metabolize xylose. L. lactis 210, a dairy starter culture strain, has neither xylose isomerase nor xylulokinase activity and is Xyl(-). Xylose isomerase and xylulokinase activities are induced by xylose and repressed by glucose in the two Xyl(+) strains. Sequence comparisons revealed a number of point mutations in the xylA, xylB, and xylR genes in L. lactis 210, IO-1, and B-4449. None of these mutations, with the exception of a premature stop codon in xylB, are obviously lethal, since they lie outside of regions recognized as critical for activity. Nevertheless, either cumulatively or because of indirect affects on the structures of catalytic sites, these mutations render some strains of L. lactis unable to metabolize xylose.


Subject(s)
Bacterial Proteins , Lactococcus lactis/metabolism , Xylose/metabolism , Aldose-Ketose Isomerases/chemistry , Aldose-Ketose Isomerases/genetics , Aldose-Ketose Isomerases/metabolism , Amino Acid Sequence , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Lactococcus lactis/genetics , Molecular Sequence Data , Operon , Phosphotransferases (Alcohol Group Acceptor)/chemistry , Phosphotransferases (Alcohol Group Acceptor)/genetics , Phosphotransferases (Alcohol Group Acceptor)/metabolism , Sequence Analysis, DNA , Transcription Factors/chemistry , Transcription Factors/genetics , Transcription Factors/metabolism
8.
Lett Appl Microbiol ; 30(2): 167-71, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10736022

ABSTRACT

An extracellular acetyl esterase (EC 3.1.1.6) from Candida guilliermondii NRRL Y-17257 was purified to homogeneity by acetone precipitation and QAE sepharose anion-exchange chromatography. The enzyme was a monomer with an apparent molecular weight of 67 kDa and a pI of 7.6. It had maximum activity at pH 7.5 and at 50-60 degrees C. It was relatively stable over a pH range of 5.8-8.0 and exhibited thermal stability up to 60 degrees C. The Km and Vmax values on alpha-naphthylacetate were 2.63 mM and 213.3 micromol alpha- naphthol min-1 mg-1 protein, respectively.


Subject(s)
Acetylesterase/isolation & purification , Acetylesterase/metabolism , Candida/enzymology , Acetylesterase/chemistry , Candida/growth & development , Hydrogen-Ion Concentration , Isoelectric Focusing , Kinetics , Molecular Weight , Temperature , Xylans/metabolism
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