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1.
Braz J Biol ; 83: e275598, 2023.
Article in English | MEDLINE | ID: mdl-37971087

ABSTRACT

The Bacalar Lagoon (BL) in Quintana Roo, Mexico; is an area of high interest due to its tourist potential. However, the changes in landuse patterns, urbanization, extensive cattle ranching and rapidly expanding agriculture, have generated negative impacts on areas of adjacent plan communities and wildlife habitats. The objective of this study has to evaluate the level of vegetation conservation in the southern portion of the BL through the avifauna present in sites with contrasting degrees of conservation. Additionally, change "and their habitat preference(s) in the different communities" to and their habitat use preferences in the different communities. To evaluate the level of conservation of the BL, field visits and botanical collections were carried out to identify species. For the counting and identification of birds, monthly surveys were made through coastal tours along the cenote Xul-ha in 2.5 km transects. Four transects were established: two for sites characterized as semi-conserved and two with disturbed sites. A total richness of 40 taxa was observed, which corresponds to 8.1% of the Quintana Roo avifauna and 32% to wetland birds (125 species). The species accumulation curves indicated that semi-conserved and disturbed sites tend to reach asymptotes and with a coverage percentage greater than 90%. In terms of diversity and community structure, no significant differences were observed. However, the semi-conserved and disturbed sites each have 11 unique species and share 18 species. The LB has an intermediate diversity of bird species compared to studies at the Mexican level, the habitat is important for the conservation of birdlife; as it functions as a reservoir of diversity. Strategies has been suggested that promote sustainable tourism, support the restoration of natural vegetation; and facilitate the economic development of the region.


Subject(s)
Biodiversity , Conservation of Natural Resources , Animals , Cattle , Mexico , Ecosystem , Animals, Wild , Birds
2.
AJNR Am J Neuroradiol ; 43(1): 125-131, 2022 01.
Article in English | MEDLINE | ID: mdl-34764083

ABSTRACT

BACKGROUND AND PURPOSE: Gamma-aminobutyric acid and glutamate system disruptions may underlie neonatal brain injury. However, in vivo investigations are challenged by the need for special 1H-MR spectroscopy sequences for the reliable measurement of the neurotransmitters in this population. We used J-edited 1H-MR spectroscopy (Mescher-Garwood point-resolved spectroscopy) to quantify regional in vivo gamma-aminobutyric acid and glutamate concentrations during the early postnatal period in healthy neonates. MATERIALS AND METHODS: We prospectively enrolled healthy neonates and acquired Mescher-Garwood point-resolved spectroscopy spectra on a 3T MR imaging scanner from voxels located in the cerebellum, the right basal ganglia, and the right frontal lobe. CSF-corrected metabolite concentrations were compared for regional variations and cross-sectional temporal trends with advancing age. RESULTS: Fifty-eight neonates with acceptable spectra acquired at postmenstrual age of 39.1 (SD, 1.3) weeks were included for analysis. Gamma-aminobutyric acid (+ macromolecule) (2.56 [SD, 0.1]) i.u., glutamate (3.80 [SD, 0.2]), Cho, and mIns concentrations were highest in the cerebellum, whereas NAA (6.72 [SD, 0.2]), NAA/Cho, Cr/Cho, and Glx/Cho were highest in the basal ganglia. Frontal gamma-aminobutyric acid (1.63 [SD, 0.1]), Glx (4.33 [SD, 0.3]), Cr (3.64 [SD, 0.2]), and Cho concentrations were the lowest among the ROIs. Glx, NAA, and Cr demonstrated a significant adjusted increase with postmenstrual age (ß = 0.2-0.35), whereas gamma-aminobutyric acid and Cho did not. CONCLUSIONS: We report normative regional variations and temporal trends of in vivo gamma-aminobutyric acid and glutamate concentrations reflecting the functional and maturational status of 3 distinct brain regions of the neonate. These measures will serve as important normative values to allow early detection of subtle neurometabolic alterations in high-risk neonates.


Subject(s)
Glutamic Acid , gamma-Aminobutyric Acid , Aspartic Acid/metabolism , Brain/diagnostic imaging , Brain/metabolism , Cross-Sectional Studies , Glutamic Acid/metabolism , Humans , Infant , Infant, Newborn , Magnetic Resonance Spectroscopy/methods , gamma-Aminobutyric Acid/metabolism
3.
Biosystems ; 206: 104450, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34098060

ABSTRACT

In this paper, we have developed a multi-scale, lattice-free, agent based model of avascular tumour growth in epithelial tissue. The model integrates different events to identify the underlying diversity within intracellular, cellular, and extracellular layer dynamics. The model considers every cell as an agent. A cellular agent may proliferate, spawns two identical daughter agents, or it may be transformed into other phenotypes during its life time depending on its internal proteins' activity as well as its external microenvironment. In this context, a simplified age-structured cell cycle model is adopted from the existing literature. The model considers that the intracellular events are regulated by p27 gene expression. In this model, p27 protein controls the overall tumour growth dynamics. Moreover, p27 is controlled by the external oxygen and nutrients that are modelled with the reaction-diffusion equations. The model also considers several biophysical forces which directly effect on the tumour growth dynamics. This modelling framework offers biologically realistic outcomes and also covers important criteria of the hallmarks of cancer which include oxygen and nutrient consumptions, micro-environmental heterogeneity, tumour cell proliferation by avoiding growth suppressor signals, replication of tumour cells at an abnormally faster rate, and resistance of apoptosis. The avascular tumour growth model is validated with immunohistochemistry and histopathology data. The outcome of the proposed model is very close to the range of the patient data, which concludes that the model is capable enough to mimic these complex biophysical phenomena.


Subject(s)
Cell Proliferation/physiology , Computer Simulation , Models, Biological , Neoplasms/pathology , Tumor Microenvironment/physiology , Humans , Neoplasms/metabolism
4.
J Biol Phys ; 46(1): 67-94, 2020 03.
Article in English | MEDLINE | ID: mdl-32185594

ABSTRACT

In this study, we model avascular tumour growth in epithelial tissue. This can help us to understand that how an avascular tumour interacts with its microenvironment and what type of physical changes can be observed within the tumour spheroid before angiogenesis. This understanding is likely to assist in the development of better diagnostics, improved therapies, and prognostics. In biological systems, most of the diffusive processes are through cellular membranes which are porous in nature. Due to its porous nature, diffusion in biological systems are heterogeneous. The fractional diffusion equation is well suited to model heterogeneous biological systems, though most of the early studies did not use this fact. They described tumour growth with simple diffusion-based model. We have developed a spherical model based on simple diffusion initially, and then the model is upgraded with fractional diffusion equations to express the anomalous nature of biological system. In this study, two types of fractional models are developed: one of fixed order and the other of variable order. The memory formalism technique is also included in these anomalous diffusion models. These three models are investigated from phenomenological point view by measuring some parameters for characterizing avascular tumour growth over time. Tumour microenvironment is very complex in nature due to several concurrent molecular mechanisms. Diffusion with memory (fixed as well as variable) formation may be an oversimplified technique, and does not reflect the detailed view of the tumour microenvironment. However, it is found that all the models offer realistic and insightful information of the tumour microenvironment at the macroscopic level, and approximate well the physical phenomena. Also, it is observed that the anomalous diffusion based models offer a closer description to clinical facts than the simple model. As the simulation parameters get modified due to different biochemical and biophysical processes, the robustness of the model is determined. It is found that the anomalous diffusion models are moderately sensitive to the parameters.


Subject(s)
Models, Biological , Neoplasms/pathology , Cell Proliferation , Diffusion
5.
Blood Cancer J ; 5: e302, 2015 Apr 10.
Article in English | MEDLINE | ID: mdl-25860293

ABSTRACT

Bone marrow-derived mesenchymal stromal cells (BM-MSCs) play a fundamental role in the BM microenvironment (BME) and abnormalities of these cells may contribute to acute myeloid leukemia (AML) pathogenesis. The aim of the study was to characterize the cytokine and gene expression profile, immunophenotype and cytogenetics of BM-MSCs from AML patients compared to normal BM-MSCs from healthy donors. AML BM-MSCs showed decreased monocyte chemoattractant protein-1 levels compared to normal BM-MSCs. AML BM-MSCs expressed similar ß1 integrin, CD44, CD73, CD90 and E-cadherin compared to normal BM-MSCs. Cytogenetic analysis revealed chromosomal aberrations in AML BM-MSCs, some overlapping with and others distinct from their corresponding AML blasts. No significant difference in gene expression was detected between AML BM-MSCs compared to normal BM-MSCs; however, comparing the differences between AML and MSCs from AML patients with the differences between normal hematopoietic cells and normal MSCs by Ingenuity pathway analysis showed key distinctions of the AML setting: (1) upstream gene regulation by transforming growth factor beta 1, tumor necrosis factor, tissue transglutaminase 2, CCAAT/enhancer binding protein alpha and SWItch/Sucrose NonFermentable related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4; (2) integrin and interleukin 8 signaling as overrepresented canonical pathways; and (3) upregulation of transcription factors FBJ murine osteosarcoma viral oncogene homolog and v-myb avian myeloblastosis viral oncogene homolog. Thus, phenotypic abnormalities of AML BM-MSCs highlight a dysfunctional BME that may impact AML survival and proliferation.


Subject(s)
Bone Marrow/pathology , Chromosome Aberrations , Leukemia, Myeloid, Acute/genetics , Mesenchymal Stem Cells , Tumor Microenvironment/genetics , Adult , Aged , Animals , Cell Differentiation/genetics , Cell Proliferation/genetics , Cytogenetic Analysis , Female , Gene Expression Regulation, Leukemic , Humans , Leukemia, Myeloid, Acute/pathology , Male , Mice , Middle Aged , Neoplasm Proteins/biosynthesis , Neoplasm Proteins/genetics , Protein Glutamine gamma Glutamyltransferase 2 , Transcriptome
6.
Malays J Nutr ; 15(2): 233-41, 2009 Sep.
Article in English | MEDLINE | ID: mdl-22691821

ABSTRACT

The proximate composition and functional properties of three edible mushroom (Ganoderma spp., Omphalotus olearius (DC.) Sing. and Hebeloma mesophaeum (Pers.) Quél.) flours used in Nasarawa state, Nigaria were investigated using standard analytical techniques. The samples contained crude protein in the range of 18.5% in Omphalotus olearius to 21.5% in Ganoderma spp. Crude fat varied with values ranging from 6.9% in Ganoderma spp. to 8.7% in Omphalotus olearius. Other proximate composition values were in the following ranges: moisture content 10.0 - 11.1%, ash 7.3 - 8.3%, crude fibre 2.8 - 3.5% and carbohydrate (by difference) 50.3 - 50.9%. The range values of functional properties were: foaming capacity 101.8 - 131.5%, foaming stability 51.0 - 54.0%, water absorption capacity 260.0 - 390.0%, oil absorption capacity 450 - 480%, oil emulsion capacity 57.3 - 61.0mLg- 1, least gelation concentration 12.0 - 14.0% and bulk density 230.0 - 410.0gmL-1. The results showed that these nutrient rich mushroom flours under investigation may prove useful in the formulation of different food products where foaming, emulsification, retention of flavour and palatability as well as gel formation are required.

7.
J Indian Med Assoc ; 106(5): 307-9, 2008 May.
Article in English | MEDLINE | ID: mdl-18839637

ABSTRACT

Foreign body in ENT region is an age-old problem. Introduction of foreign body in ear, nose and throat is specially seen in children. There are many types of foreign body seen in the ear, nose and throat. They can aspirate into larynx, trachea and bronchus. How to manage the removal of foreign body in ear, nose and throat had been discussed in a nutshell. General practitioners should be skilled enough to remove foreign body with their limited resources and they should know when to send the cases to an ENT specialist or to a hospital.


Subject(s)
Ear Diseases/diagnosis , Foreign Bodies/therapy , Nose Diseases/diagnosis , Pharynx/injuries , Physicians, Family , Ear Diseases/etiology , Ear Diseases/pathology , Foreign Bodies/surgery , Humans , Nose Diseases/etiology , Nose Diseases/pathology
8.
PDA J Pharm Sci Technol ; 62(2): 125-54, 2008.
Article in English | MEDLINE | ID: mdl-18540538

ABSTRACT

In the last couple of decades, use of biodegradable polymer-based microspheres has been recognized as an interesting and promising approach for parenteral controlled delivery of therapeutic peptide/protein, including antigens. The main objectives of this review are (i) to update the current state of art of manufacturing of peptide/protein-loaded microspheres through both conventional and newer microencapsulation techniques, and (ii) to bring into focus the various possible instability problems, and the investigated mechanistic ways to obviate the instability problems of peptide/protein drug during microspheres preparation as well as its release from the microspheres. The solubilization, stabilization, and preservation enhancing excipients that are used in peptide/protein-loaded microspheres are briefly overviewed.


Subject(s)
Microspheres , Peptides/administration & dosage , Proteins/administration & dosage , Chemistry, Pharmaceutical , Delayed-Action Preparations , Drug Stability , Excipients/chemistry , Injections , Peptides/chemistry , Polymers/chemistry , Proteins/chemistry , Technology, Pharmaceutical/methods
9.
Med J Armed Forces India ; 64(1): 81, 2008 Jan.
Article in English | MEDLINE | ID: mdl-27408091
10.
Indian J Pathol Microbiol ; 50(2): 325-6, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17883058

ABSTRACT

Merkel cell carcinoma is an uncommon, highly malignant, primary cutaneous neuroendocrine tumour mostly occurring as a solitary nodule on the head or on the extremities. It has high recurrence rate. We hereby report a case of Merkel cell carcinoma in a young woman.


Subject(s)
Carcinoma, Merkel Cell/pathology , Skin Neoplasms/pathology , Adult , Carcinoma, Merkel Cell/diagnosis , Carcinoma, Merkel Cell/metabolism , Diagnosis, Differential , Female , Humans , Immunohistochemistry , Scalp , Skin Neoplasms/diagnosis , Skin Neoplasms/metabolism
11.
Indian J Pathol Microbiol ; 49(3): 433-5, 2006 Jul.
Article in English | MEDLINE | ID: mdl-17001913

ABSTRACT

Five cases of tumoral calcinosis were studied during the period of January-february 1999 in MIMER medical college, Talegaon, a rural place 35kms. from Pune. All the Five patients were females residing in nonendemic area for Dracunculosis. They were from 5th-6th decade. They were otherwise healthy and had normal serum calcium and phosphorus levels and no eosinophilia. All had large, hard subcutaneous lump around hip joint. The skin overlying the swelling was normal. Histologically all cases showed similar morphology, the lesions were composed of large and small deposits of calcium. The foreign-body giant cell reaction was seen in two cases. There were no eosinophils and lymphocytes. On multiple sectioning none of the cases revealed any evidence of dead or living parasite. Old and recent necrosis was absent. These cases are presented since the condition is comparatively rare and it appeared in crops in our Institute.


Subject(s)
Calcinosis/pathology , Hip Joint , Soft Tissue Neoplasms/pathology , Subcutaneous Tissue/pathology , Female , Giant Cells/pathology , Humans , India , Middle Aged , Rural Population
12.
Indian J Exp Biol ; 44(2): 123-7, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16480178

ABSTRACT

The study was designed to examine the binding of diclofenac sodium with bovine serum albumin (BSA) at different temperatures (20 degrees, 30 degrees and 40 degrees C), pH (6.4, 7.4 and 8.4) and ionic strengths (micro = 0.1, 0.2 and 0.3) by means of equilibrium dialysis method. The concentration of diclofenac sodium was maintained at wider range from 15 to 900 micromole/l and BSA concentration was maintained at 61.5 micromole/l. The data obtained were interpreted by nonlinear regression method using Graphpad prism software. The analysis showed that the interaction between diclofenac sodium with BSA results in two-site saturable binding. A decrease in association constant was observed with increasing temperature. The average standard free energy change (deltaGdegrees) value was -7.07 (site I) and -4.2 (site II) Kcal/mol. The standard enthalpy change (deltaHdegrees) and the standard entropy change (deltaSdegrees) were -7.8 Kcal/mole, -2.35 cal/mole (site I) and -7.4 Kcal/mole, -10.5 cal/mole (site II), respectively. The negative enthalpy change suggested the binding between diclofenac sodium and the binding sites of BSA were spontaneous and exothermic. The negative value of deltaHdegrees and deltaSdegrees indicated hydrogen bonding and van der Waal's force was the major mechanism for diclofenac sodium and BSA interaction. Increase in pH and ionic strength also caused decrease in association constant of diclofenac sodium and BSA binding.


Subject(s)
Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Diclofenac/pharmacology , Serum Albumin, Bovine/metabolism , Animals , Cattle , Dialysis/methods , Hydrogen-Ion Concentration , Osmolar Concentration , Protein Binding/drug effects , Thermodynamics
14.
Indian J Otolaryngol Head Neck Surg ; 58(3): 271-3, 2006 Jul.
Article in English | MEDLINE | ID: mdl-23120310

ABSTRACT

Otitis media with effusion is one of the commonest otological problems in paediatric age group. The condition occurs in childhood as overt or covert hearing loss presenting as an educational or behavioural problem. As there is widespread controversy regarding its precise aetiology, natural history and pathogenesis a treatment dilemma still persists. The main goal of this study is to compare the efficacy of different modalities of medical and surgical treatment designed for this condition and analysis of the results statistical.

15.
Environ Technol ; 26(12): 1383-91, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16372573

ABSTRACT

The potential for reductive dehalogenation of 2-CP in anaerobic batch cultures of fresh-water digested sludge under sulfidogenic and methanogenic conditions was investigated in the presence or absence of respective inhibitors: molybdate and BESA at various concentrations (0 to 10 mM). Triplicate cultures (50% vol/vol) were set-up under an atmosphere of 20% CO2 and 80% N2 in 160 ml serum bottles using anaerobic digester sludge and a mineral medium containing 0.1% yeast extract. The dehalogenation of 2-CP, as well as methanogenesis, occurred at the same rate in the presence or absence of sulphate. Sulphate reduction did not inhibit 2-CP degrading populations. The presence of BESA--a known inhibitor of methane producers partially inhibited methanogenesis and slowed 2-CP dehalogenation at even 1 mM concentration with phenol and acetate accumulation in the cultures. The accumulation was proportional to the increase in concentration of BESA in the system. Molybdate on the other hand completely inhibited both sulphate reduction and 2-CP dehalogenation at a concentration of 10 mM. The dehalogenation of 2-CP continued in the presence of 1 mM molybdate even after the cessation of sulphate reduction indicating that sulphate-reducing bacteria were not directly involved in the dehalogenation of 2-CP in this study. Inhibition of 2-CP dehalogenation and sulphate reduction along with accumulation of propionate at 10 mM molybdate in the cultures strongly suggests that the dehalogenation of 2-CP was more directly linked to syntrophic activity of the mixed culture compared to sulphate reduction.


Subject(s)
Bacteria/metabolism , Chlorophenols/metabolism , Halogens/metabolism , Methane/metabolism , Sulfates/metabolism , Anaerobiosis , Biodegradation, Environmental , Culture Media , Molybdenum/pharmacology , Propionates/metabolism , Sewage/chemistry , Sewage/microbiology , Time Factors , Water Microbiology
16.
J Indian Med Assoc ; 103(10): 530-2, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16498755

ABSTRACT

The power of a child's speaking language never develops if he is deaf. Deafness persists if it is not detected early. Childhood deafness is either congenital or acquired. At birth, doctors or attendants can detect deafness by arousing the baby with sudden loud noise. At 4 months onwards mothers and doctors can detect deafness. The baby at this age can turn its head or eyes towards the source of the sound. By 12 months to 2 years of age it is very difficult to detect deafness. By the age of 3 years children again become co-operative and it becomes easier to detect deafness. Children should always be screened for deafness while being admitted to nursery classes. In school going age ie, 5 years onwards loss of tests can be employed to detect deafness. If a child is suspected be deaf, a general practitioner's responsibility is to refer him to an ENT specialist earlier. Any child whose mother believes her child is deaf should be given due attention. Otitis media with effusion, enlarged adenoid, chronic suppurative otitis media, recurrent otitis media are some diseases to be carefully looked into by the general practitioners. Now-a-days cochlear implantation surgery is gaining popularity to give hearing to deaf child. Moreover regular screening for deafness should be included school heath programme.


Subject(s)
Cochlear Implantation , Deafness/diagnosis , Family Practice , Hearing Tests , Child, Preschool , Deafness/physiopathology , Deafness/surgery , Disabled Children , Early Diagnosis , Humans , Infant , Mass Screening
17.
J Indian Med Assoc ; 101(5): 324-5, 2003 May.
Article in English | MEDLINE | ID: mdl-14575226

ABSTRACT

A 48-year-old Hindu housewife was presented with increased appetite, thirst, frequency of micturition, weakness, cramps in the legs, tingling in the fingers, decline in bladder-bowel control and dimness of vision. She was a patient of diabetes. On investigations and history, she was diagnosed as a case of type 2 diabetes transmitted in three generations as an autosomal dominant trait.


Subject(s)
Diabetes Mellitus, Type 2/genetics , Genes, Dominant/genetics , Diabetes Mellitus, Type 2/complications , Family , Female , Humans , Middle Aged , Pedigree
18.
Med J Armed Forces India ; 59(1): 75-6, 2003 Jan.
Article in English | MEDLINE | ID: mdl-27407467
20.
Microbiology (Reading) ; 147(Pt 9): 2479-2491, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11535788

ABSTRACT

Twenty-three propane- and butane-utilizing bacteria were isolated from soil samples collected from oilfields. Three of them have been identified as Rhodococcus sp. IMT35, Pseudomonas sp. IMT37 and Pseudomonas sp. MT40. SDS-PAGE analysis of the membrane of Rhodococcus sp. IMT35 revealed the presence of at least four polypeptides induced by propane. Polyclonal antibody raised against a 58 kDa polypeptide from Rhodococcus sp. IMT35 specifically detected bacteria which were actively utilizing propane or butane. Immunoscreening of a genomic library in lambdagt11 with this antibody resulted in isolation of a clone containing a 4.9 kb EcoRI genomic DNA fragment. This 4.9 kb DNA fragment was found to hybridize specifically with organisms which could grow on propane or butane. This fragment could therefore be used as a probe for detection of such bacteria. A 2.3 kb fragment having an ORF encoding a polypeptide of 54 kDa was identified by screening a genomic library of Pseudomonas sp. IMT37 with this 4.9 kb EcoRI fragment. The sequence of the ORF (designated orf54) was found to be novel. Primer extension and S1 nuclease mapping showed that transcription of the ORF starts at base 283 and it had sequences upstream similar to that of a Pseudomonas promoter (-12, -24 type). Disruption of the ORF by a kanamycin ('kan') cassette prevented the organism from growing on any alkane but did not affect its ability to utilize the respective alkanols and acids, indicating that alcohol dehydrogenase and subsequent steps in the pathway remained unaltered. The mutants had no detectable level of butane monooxygenase activity. Therefore, the product of this gene plays a crucial role in the first step of the pathway and is an essential component of monooxygenase. The findings imply that this bacterium either employs a common genetic and metabolic route or at least shares the product of this gene for utilization of many alkanes.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Butanes/metabolism , Genes, Bacterial , Pseudomonas/genetics , Pseudomonas/metabolism , Bacterial Proteins/chemistry , Base Sequence , Chromosome Mapping , Cloning, Molecular , DNA, Bacterial/genetics , Genomic Library , Molecular Sequence Data , Molecular Weight , Mutagenesis, Insertional , Open Reading Frames , Plasmids/genetics , Propane/metabolism , Pseudomonas/isolation & purification , Sequence Homology, Nucleic Acid , Soil Microbiology
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