Food securers or invasive aliens? Trends and consequences of non-native livestock introgression in developing countries.

Importation of livestock genetic resources from industrialized countries for introgression of specific traits and other forms of crossbreeding is often indicative of a shift in production systems toward greater intensification and specialization. In developing countries, imported genetic resources are regarded as both a solution to improve the performance of local livestock and as one of the main threats to local populations. Using international databases, censuses and technical reports, we investigate ongoing trends and consequences of these two phenomena in 40 countries from Africa, Asia and Latin America. In these countries, the share of locally adapted breeds within species has decreased by an average of 0.76% per year over the last 20 years. The corresponding increase has been distributed between pure exotic breeds and crossbred animals, with differences across regions. In several countries, increased utilization of exotic cattle breeds and crossbreeding has been accompanied by a trend in increased milk yield per cow. The shift from local genetic resources to crossbred and exotic animals must be considered in the context of challenges such as food security, erosion of agrobiodiversity, interactions with other agricultural production, reduction of poverty and provision of ecosystem services, as well as resilience to and mitigation of climate change.

A mid-term analysis of progress toward international biodiversity targets.

In 2010, the international community, under the auspices of the Convention on Biological Diversity, agreed on 20 biodiversity-related "Aichi Targets" to be achieved within a decade. We provide a comprehensive mid-term assessment of progress toward these global targets using 55 indicator data sets. We projected indicator trends to 2020 using an adaptive statistical framework that incorporated the specific properties of individual time series. On current trajectories, results suggest that despite accelerating policy and management responses to the biodiversity crisis, the impacts of these efforts are unlikely to be reflected in improved trends in the state of biodiversity by 2020. We highlight areas of societal endeavor requiring additional efforts to achieve the Aichi Targets, and provide a baseline against which to assess future progress.

Genetic diversity, population structure and subdivision of local Balkan pig breeds in Austria, Croatia, Serbia and Bosnia-Herzegovina and its practical value in conservation programs.

BACKGROUND: At present the Croatian Turopolje pig population comprises about 157 breeding animals. In Austria, 324 Turopolje pigs originating from six Croatian founder animals are registered. Multiple bottlenecks have occurred in this population, one major one rather recently and several more older and moderate ones. In addition, it has been subdivided into three subpopulations, one in Austria and two in Croatia, with restricted gene flow. These specificities explain the delicate situation of this endangered Croatian lard-type pig breed. METHODS: In order to identify candidate breeding animals or gene pools for future conservation breeding programs, we studied the genetic diversity and population structure of this breed using microsatellite data from 197 individuals belonging to five different breeds. RESULTS: The genetic diversity of the Turopolje pig is dramatically low with observed heterozygosities values ranging from 0.38 to 0.57. Split into three populations since 1994, two genetic clusters could be identified: one highly conserved Croatian gene pool in Turopoljski Lug and the"Posavina" gene pool mainly present in the Austrian population. The second Croatian subpopulation in Lonjsko Polje in the Posavina region shows a constant gene flow from the Turopoljski Lug animals. CONCLUSIONS: One practical conclusion is that it is necessary to develop a "Posavina" boar line to preserve the "Posavina" gene pool and constitute a corresponding population in Croatia. Animals of the highly inbred herd in Turopoljski Lug should not be crossed with animals of other populations since they represent a specific phenotype-genotype combination. However to increase the genetic diversity of this herd, a program to optimize its sex ratio should be carried out, as was done in the Austrian population where the level of heterozygosity has remained moderate despite its heavy bottleneck in 1994.

Italian ryegrass silage in winter feeding of organic dairy cows: forage intake, milk yield and composition.

BACKGROUND: Organic milk production aims at efficient use of home-grown feeds, especially forages, to minimise the quantity of purchased feeds. In conventional agriculture, Italian ryegrass (Lolium multiflorum Lam.) is known for its high energy content and palatability, and the aim of the present study was to examine its suitability as feed for organic dairy cows. Therefore a feeding trial was conducted comparing a diet including 50% (of silage dry matter (DM)) of Italian ryegrass silage with a control diet based on grass/clover silage (a mixture of the second cut from permanent grassland and the second cut from a perennial clovergrass ley) alone. RESULTS: Inclusion of Italian ryegrass silage in the diet increased forage intake significantly (14.5 vs 13.4 kg DM in the control group) and concentrate intake did not differ, but milk yield was slightly lower (20.3 vs 21.0 kg) owing to the low energy and protein concentration of Italian ryegrass silage. CONCLUSION: Italian ryegrass was indeed found to be highly palatable, confirming in principle its suitability as feed for organic dairy cows. However, higher energy and protein concentrations in this forage would be necessary to translate the high intakes of Italian ryegrass silage into improved milk production as well.

Genetic and morphological characterisation of the Ankole Longhorn cattle in the African Great Lakes region.

The study investigated the population structure, diversity and differentiation of almost all of the ecotypes representing the African Ankole Longhorn cattle breed on the basis of morphometric (shape and size), genotypic and spatial distance data. Twentyone morphometric measurements were used to describe the morphology of 439 individuals from 11 sub-populations located in five countries around the Great Lakes region of central and eastern Africa. Additionally, 472 individuals were genotyped using 15 DNA microsatellites. Femoral length, horn length, horn circumference, rump height, body length and fore-limb circumference showed the largest differences between regions. An overall FST index indicated that 2.7% of the total genetic variation was present among sub-populations. The least differentiation was observed between the two sub-populations of Mbarara south and Luwero in Uganda, while the highest level of differentiation was observed between the Mugamba in Burundi and Malagarasi in Tanzania. An estimated membership of four for the inferred clusters from a model-based Bayesian approach was obtained. Both analyses on distance-based and model-based methods consistently isolated the Mugamba sub-population in Burundi from the others.

A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse.

In horses, graying with age is an autosomal dominant trait associated with a high incidence of melanoma and vitiligo-like depigmentation. Here we show that the Gray phenotype is caused by a 4.6-kb duplication in intron 6 of STX17 (syntaxin-17) that constitutes a cis-acting regulatory mutation. Both STX17 and the neighboring NR4A3 gene are overexpressed in melanomas from Gray horses. Gray horses carrying a loss-of-function mutation in ASIP (agouti signaling protein) had a higher incidence of melanoma, implying that increased melanocortin-1 receptor signaling promotes melanoma development in Gray horses. The Gray horse provides a notable example of how humans have cherry-picked mutations with favorable phenotypic effects in domestic animals.

Effects of partial substitution of concentrates with maize silage in organic dairy cow rations on performance and feed efficiency.

BACKGROUND: The general goal of organic dairy farming is to minimize purchased concentrate use and focus on milk production from forages. The aim of the present paper is to examine the influence of a partial substitution of purchased concentrates with home-grown maize silage on feed intake, milk production and feed efficiency in rations for organic dairy cows. In the experimental treatment group (E), two-thirds of average herd concentrate intake was replaced with 2.7 kg maize silage on a dry matter (DM) basis. RESULTS: In treatment E, total DM, energy and protein intake were significantly reduced compared to the control treatment group (C). Daily milk yield decreased in E by 11% and milk urea content was significantly lower. Calculated milk production from forage was significantly higher (91 versus 71%) in treatment E. Efficiency of dietary nitrogen (N) utilization (calculated as milk N as a percentage of N intake) was slightly improved in E and protein and energy balance (calculated as intake as a percentage of requirements) were closer to zero than in C. CONCLUSION: The present study indicates a potential to reduce levels of concentrates and substitute them with maize silage in organic dairy cow rations at least in the second half of lactation. Copyright © 2007 Society of Chemical Industry.

Pedigree and marker information requirements to monitor genetic variability.

There are several measures available to describe the genetic variability of populations. The average inbreeding coefficient of a population based on pedigree information is a frequently chosen option. Due to the developments in molecular genetics it is also possible to calculate inbreeding coefficients based on genetic marker information. A simulation study was carried out involving ten sires and 50 dams. The animals were mated over a period of 20 discrete generations. The population size was kept constant. Different situations with regard to the level of polymorphism and initial allele frequencies and mating scheme (random mating, avoidance of full sib mating, avoidance of full sib and half sib mating) were considered. Pedigree inbreeding coefficients of the last generation using full pedigree or 10, 5 and 2 generations of the pedigree were calculated. Marker inbreeding coefficients based on different sets of microsatellite loci were also investigated. Under random mating, pedigree-inbreeding coefficients are clearly more closely related to true autozygosity (i.e., the actual proportion of loci with alleles identical by descent) than marker-inbreeding coefficients. If mating is not random, the demands on the quality and quantity of pedigree records increase. Greater attention must be paid to the correct parentage of the animals.