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1.
J Virol Methods ; 137(1): 88-94, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16837068

ABSTRACT

A microsphere immunoassay (MIA) was developed for the detection of serum antibodies to avian influenza virus. A recombinant influenza A nucleoprotein expressed in baculovirus was conjugated to microspheres and incubated with antibodies. High median fluorescent intensities (MFIs) were obtained with a monoclonal antibody and positive chicken sera. Chickens were inoculated with 10 strains of avian influenza virus representing different subtypes, including high and low pathogenic H5 and H7 subtypes. Three hundred and fifty-four samples from experimentally infected chickens and controls were tested with a competitive ELISA (cELISA) and the MIA. MFIs were converted to positive/negative (PN) ratios. The results of both tests, as percentage inhibition and PN ratio, showed a high correlation (R2 = 0.77). From the comparison data, a ratio of > or =4.5 was selected as the cut-off value for positivity in the MIA. Using this cut-off value, the sensitivity and specificity of the MIA relative to the cELISA when all discordant experimental samples were retested was 99.3 and 93.1%, respectively. The relative specificity increased to 94.7% when additional negative sera (n = 68) were tested. The MIA may be useful for surveillance testing and as a screening test for flocks infected with low pathogenic avian influenza virus and could be expanded for simultaneous detection of antibodies against other avian infectious disease agents.


Subject(s)
Antibodies, Viral/blood , Immunoassay/methods , Influenza A virus/immunology , Influenza in Birds/immunology , Animals , Biotin , Chickens , Enzyme-Linked Immunosorbent Assay , Fluorescence , Microspheres , Nucleocapsid Proteins , Nucleoproteins/chemistry , Nucleoproteins/genetics , Nucleoproteins/immunology , RNA-Binding Proteins/chemistry , RNA-Binding Proteins/genetics , RNA-Binding Proteins/immunology , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Sensitivity and Specificity , Statistics as Topic , Streptavidin , Viral Core Proteins/chemistry , Viral Core Proteins/genetics , Viral Core Proteins/immunology
2.
J Virol Methods ; 136(1-2): 17-23, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16690139

ABSTRACT

An oligonucleotide suspension microarray (Luminex microsphere system) was developed for detection and differentiation of animal pestiviruses: classical swine fever virus (CSFV), bovine viral diarrhea virus types 1 and 2 (BVDV1 and BVDV2), and border disease virus (BDV). Species-specific and pestivirus-common oligonucleotide probes were designed to the 5' UTR region and conjugated to individual color-coded Luminex carboxy beads (probe beads). Target pestivirus sequences were amplified by asymmetric PCR using a biotinylated reverse primer and a forward and reverse primer ratio of 1:5. The biotinylated products were hybridized to eight probe beads in a multiplex assay and analyzed using streptavidin conjugated to a fluorescent reporter molecule. The assay was able to detect and differentiate all 40 strains of CSFV, BVDV1, BVDV2 and BDV tested. The analytical sensitivity was determined to be 0.2-10 TCID50/ml. The major advantages of the DNA-microsphere suspension microarray, as a low density array, are its ease of handling and ability to simultaneously detect and type multiple infectious agents.


Subject(s)
Oligonucleotide Array Sequence Analysis/methods , Pestivirus/classification , Pestivirus/genetics , 5' Untranslated Regions/genetics , Biotin , Fluorescence , Genotype , Microspheres , Polymerase Chain Reaction/methods , RNA, Viral/genetics , Sensitivity and Specificity , Staining and Labeling , Streptavidin
3.
Vet J ; 172(3): 473-81, 2006 Nov.
Article in English | MEDLINE | ID: mdl-16139533

ABSTRACT

Foot-and-mouth disease virus (FMDV) is the most economically important veterinary pathogen because of its highly infectious nature and the devastating effects the virus has on the livestock industry. Rapid diagnostic methods are needed for detection and typing of FMDV serotypes and differentiation from other viruses causing vesicular diseases. We developed a microarray-based test that uses a FMD DNA chip containing 155 oligonucleotide probes, 35-45 base pair (bp) long, virus-common and serotype-specific, designed from the VP3-VP1-2A region of the genome. A set of two forward primers and one reverse primer were also designed to allow amplification of approximately 1100 bp of target sequences from this region. The amplified target was labelled with Alexa-Fluor 546 dye and applied to the FMD DNA chip. A total of 23 different FMDV strains representing all seven serotypes were detected and typed by the FMD DNA chip. Microarray technology offers a unique capability to identify multiple pathogens in a single chip.


Subject(s)
Foot-and-Mouth Disease Virus/classification , Foot-and-Mouth Disease/virology , Animals , Cell Line , Cells, Cultured , Foot-and-Mouth Disease/diagnosis , Foot-and-Mouth Disease Virus/genetics , Foot-and-Mouth Disease Virus/isolation & purification , Oligonucleotide Array Sequence Analysis/methods , Oligonucleotide Array Sequence Analysis/veterinary , RNA, Viral/chemistry , RNA, Viral/genetics , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Sheep
4.
Virus Res ; 114(1-2): 140-8, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16061301

ABSTRACT

Elk herpesvirus (ElkHV) from North American elk (wapiti, Cervus elaphus nelsoni) is a recently identified alphaherpesvirus related to bovine herpesvirus-1 (BHV-1). In this study, we determined its relationship with European cervid herpesviruses: cervid herpesvirus-1 (CerHV-1) from red deer and rangiferine herpesvirus (RanHV) from reindeer. For phylogenetic analysis, genes for the gC and gD proteins of these viruses were sequenced. These genes demonstrated an extremely high GC content (76-79%). Genetically, ElkHV was found to be closely related to CerHV-1 and both viruses are more closely related to BHV-1 than to RanHV. Antigenically, the same relationships were found. ElkHV shares common neutralizing epitopes with both CerHV-1 and RanHV. A total of 10 epitopes were defined on the gB, gC and gD proteins of these viruses, including a shared neutralizing epitope on gD. The results indicate that ElkHV and CerHV-1 have diverged from a common ancestor virus. Cervid herpesviruses may be useful in determination of evolutionary rates of change for alphaherpesvirus genes.


Subject(s)
Antigens, Viral/analysis , Deer/virology , Herpesviridae Infections/veterinary , Phylogeny , Reindeer/virology , Varicellovirus/genetics , Varicellovirus/immunology , Amino Acid Sequence , Animals , Herpesviridae Infections/virology , Molecular Sequence Data , Sequence Analysis, DNA , Varicellovirus/classification , Viral Envelope Proteins/chemistry , Viral Envelope Proteins/genetics
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