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Mol Mar Biol Biotechnol ; 6(1): 33-9, 1997 Mar.
Article in English | MEDLINE | ID: mdl-9116868

ABSTRACT

Sequences of the internal transcribed spacer (ITS-1) ribosomal DNA region were compared among 88 soft-shell clams (Mya arenaria) from 12 sites (within three general areas) along the New England coast to determine whether populations were genetically heterogeneous. Two sequence variants were observed, with type 1 having a 3-nucleotide insertion and one point mutation relative to type 2. Allele-specific polymerase chain reaction (PCR); using primers specific to each sequence type, was performed to determine the distribution of individuals who had both allelic forms. DNA from soft-shell clams collected from three areas (Cobscook Bay, Maine; Gulf of Maine; and southern New England) were compared chi 2 analyses of allele-specific PCR results revealed no significant heterogeneity among the three population distributions.


Subject(s)
Bivalvia/genetics , DNA, Mitochondrial/genetics , DNA, Ribosomal/chemistry , Alleles , Animals , Base Sequence , Bivalvia/classification , DNA Primers , DNA, Mitochondrial/chemistry , DNA, Ribosomal/genetics , Genetic Variation , Molecular Sequence Data , New England , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 18S/genetics , Seawater , Sequence Homology, Nucleic Acid
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