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1.
bioRxiv ; 2023 Sep 10.
Article in English | MEDLINE | ID: mdl-38328063

ABSTRACT

Neurons project long axons that contact other distant neurons. Projections can be mapped by hijacking endogenous membrane trafficking machinery by introducing tracers. To witness functional connections in living animals, we developed a tracer detectible by magnetic resonance imaging (MRI), Mn(II). Mn(II) relies on kinesin-1 and amyloid-precursor protein to travel out axons. Within 24h, projection fields of cortical neurons can be mapped brain-wide with this technology. MnCl2 was stereotactically injected either into anterior cingulate area (ACA) or into infralimbic/prelimbic (IL/PL) of medial forebrain (n=10-12). Projections were imaged, first by manganese-enhanced MRI (MEMRI) live, and then after fixation by microscopy. MR images were collected at 100µm isotropic resolution (~5 neurons) in 3D at four time points: before and at successive time points after injections. Images were preprocessed by masking non-brain tissue, followed by intensity scaling and spatial alignment. Actual injection locations, measured from post-injection MR images, were found to be 0.06, 0.49 and 0.84mm apart between cohorts, in R-L, A-P, and D-V directions respectively. Mn(II) enhancements arrived in hindbrains by 24h in both cohorts, while co-injected rhodamine dextran was not detectible beyond immediate subcortical projections. Data-driven unbiased voxel-wise statistical maps after ACA injections revealed significant progression of Mn(II) distally into deeper brain regions: globus pallidus, dorsal striatum, amygdala, hypothalamus, substantia nigra, dorsal raphe and locus coeruleus. Accumulation was quantified as a fraction of total volume of each segment containing significantly enhanced voxels (fractional accumulation volumes), and results visualized in column graphs. Unpaired t-tests between groups of brain-wide voxel-wise intensity profiling by either region of interest (ROI) measurements or statistical parametric mapping highlighted distinct differences in distal accumulation between injection sites, with ACA projecting to periaqueductal gray and IL/PL to basolateral amygdala (p<0.001 FDR). Mn(II) distal accumulations differed dramatically between injection groups in subdomains of the hypothalamus, with ACA targeting dorsal medial, periventricular region and mammillary body nuclei, while IL/PL went to anterior hypothalamic areas and lateral hypothalamic nuclei. Given that these hypothalamic subsegments communicate activity in the central nervous system to the body, these observations describing distinct forebrain projection fields will undoubtedly lead to newer insights in mind-body relationships.

2.
Article in English | MEDLINE | ID: mdl-26640822

ABSTRACT

Recent reports from the Center for Disease Control and Kaiser Permanente demonstrate that early life adverse experience leads to morbidity and mortality in adulthood. To date there are no objective tests that help care-givers or local child protective services make informed decisions for children with a history of abuse, neglect or trauma. This is the first report from a new group of trans-disciplinary investigators describing a new approach to identify the biological impact of childhood maltreatment using clinical pathology testing. Such new quantitative measurements will be useful to identify children at risk for poor mental and physical health outcomes and to follow response to interventions.

4.
Biol Bull ; 210(3): 334, 2006 Jun.
Article in English | MEDLINE | ID: mdl-27690541
6.
Curr Protoc Mol Biol ; Chapter 14: Unit 14.15, 2003 Aug.
Article in English | MEDLINE | ID: mdl-18265322

ABSTRACT

Quantitative image analysis turns microscopic data that might otherwise be merely descriptive into reliable mechanistic information. This unit provides an overview of the types of analysis that have been useful in the past, as well as descriptions of emerging applications. In addition, two protocols are included for importing data and for the first steps of data manipulation in the more common analytical applications of the freeware, NIH Image and ImageJ, as well as commercially available imaging software, Adobe Photoshop.


Subject(s)
Image Processing, Computer-Assisted/methods , Microscopy/methods , Software , Microcomputers , Microscopy, Confocal/methods , Microscopy, Electron/methods , Microscopy, Video/methods
7.
Curr Drug Targets Infect Disord ; 2(3): 247-64, 2002 Sep.
Article in English | MEDLINE | ID: mdl-12462128

ABSTRACT

Recent advances in microbiology implicate the cytoskeleton in the life cycle of some pathogens, such as intracellular bacteria, Rickettsia and viruses. The cellular cytoskeleton provides the basis for intracellular movements such as those that transport the pathogen to and from the cell surface to the nuclear region, or those that produce cortical protrusions that project the pathogen outwards from the cell surface towards an adjacent cell. Transport in both directions within the neuron is required for pathogens such as the herpesviruses to travel to and from the nucleus and perinuclear region where replication takes place. This trafficking is likely to depend on cellular motors moving on a combination of microtubule and actin filament tracks. Recently, Bearer et al. reconstituted retrograde transport of herpes simplex virus (HSV) in the giant axon of the squid. These studies identified the tegument proteins as the viral proteins most likely to recruit retrograde motors for the transport of HSV to the neuronal nucleus. Similar microtubule-based intracellular movements are part of the biological behavior of vaccinia, a poxvirus, and of adenovirus. Pathogen-induced surface projections and motility within the cortical cytoplasm also play a role in the life cycle of intracellular pathogens. Such motility is driven by pathogen-mediated actin polymerization. Virulence depends on this actin-based motility, since virulence is reduced in Listeria ActA mutants that lack the ability to recruit Arp2/3 and polymerize actin and in vaccinia virus mutants that cannot stimulate actin polymerization. Inhibition of intracellular movements provides a potential strategy to limit pathogenicity. The host cell motors and tracks, as well as the pathogen factors that interact with them, are potential targets for novel antimicrobial therapy.


Subject(s)
Cytoskeleton/physiology , Listeria/physiology , Simplexvirus/physiology , Actins/physiology , Adenoviridae/physiology , Animals , Anti-Bacterial Agents , Anti-Infective Agents/pharmacology , Biological Transport/drug effects , Biological Transport/physiology , Humans , Microtubules/physiology , Polymers/metabolism , Vaccinia virus/physiology , Viral Proteins/physiology , Virus Assembly
8.
Int Rev Cytol ; 217: 137-82, 2002.
Article in English | MEDLINE | ID: mdl-12019562

ABSTRACT

The human blood platelet circulates in the blood as a non-adherent disk. Upon receiving signals of blood vessel damage, the platelet reorganizes its actin cytoskeleton which transforms it into a spiky dynamic adherent glue. This transformation involves a temporal sequence of four morphologically distinct steps which is reproducible in vitro. The actin dynamics underlying these shape changes depend on a large number of actin-binding proteins. Maintenance of the discoid shape requires actin-binding proteins that inhibit these reorganizations, whereas transformation involves other proteins, some to disassemble old filaments and others to polymerize new ones. F-Actin-affinity chromatography identified a large set of actin-binding proteins including VASP, Arp2 and 2E4/kaptin. Recent discoveries show that VASP inhibits filament disassembly and Arp2/3 is required to polymerize new filaments. Morphological analysis of the distribution of these actin-binding proteins in spread platelets together with biochemical measurements of their interactions with actin lead to a model of interactions with actin that mediate shape change.


Subject(s)
Actins/metabolism , Blood Platelets/physiology , Actins/physiology , Animals , Blood Platelets/cytology , Blood Platelets/metabolism , Calcium/metabolism , Cytoplasm/metabolism , Humans , Platelet Activation , Time Factors
9.
Laryngoscope ; 111(7): 1285-9, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11568556

ABSTRACT

HYPOTHESIS: Increased cell motility is a hallmark of cancer cells. Proteins involved in cell motility may be used as molecular markers to characterize the malignant potential of tumors. METHODS: Molecular biology and immunohistochemistry techniques were used to investigate the expression of a selected panel of motility-related proteins (Rho A, Rac 2, Cdc42, PI3K, 2E4, and Arp2) in normal, premalignant, and squamous cell cancer cell lines of human head and neck origin. To assess the clinical potential of these proteins as molecular markers for cancer, immunohistochemistry was performed on paraffin-fixed head and neck cancer specimens (n = 15). RESULTS: All six motility-associated proteins were overexpressed in the premalignant and squamous cell cancer cell lines relative to normal keratinocytes. Immunohistochemistry with Rho A and Rac 2 showed increased staining in areas of cancer but not in normal tissue. CONCLUSION: Proteins involved in cell motility can be used as markers for head and neck squamous cell carcinoma. The head and neck cell lines used in this study may be used as a model to further investigate cell motility. Molecular markers of motility could have a significant impact on the diagnosis and staging of cancers originating from differentiated non-motile cells.


Subject(s)
Biomarkers, Tumor , Carcinoma, Squamous Cell/diagnosis , Cell Movement , GTP-Binding Proteins , Head and Neck Neoplasms/diagnosis , Blotting, Western , Carcinoma, Squamous Cell/pathology , Cell Line , Female , GTP-Binding Proteins/analysis , GTP-Binding Proteins/genetics , GTP-Binding Proteins/physiology , Head and Neck Neoplasms/pathology , Humans , Immunohistochemistry , Middle Aged , Tumor Cells, Cultured , cdc42 GTP-Binding Protein/analysis , cdc42 GTP-Binding Protein/genetics , cdc42 GTP-Binding Protein/physiology
11.
Cell Motil Cytoskeleton ; 47(4): 351-64, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11093254

ABSTRACT

An initial step in platelet shape change is disassembly of actin filaments, which are then reorganized into new actin structures, including filopodia and lamellipodia. This disassembly is thought to be mediated primarily by gelsolin, an abundant actin filament-severing protein in platelets. Shape change is inhibited by VASP, another abundant actin-binding protein. Paradoxically, in vitro VASP enhances formation of actin filaments and bundles them, activities that would be expected to increase shape change, not inhibit it. We hypothesized that VASP might inhibit shape change by stabilizing filaments and preventing their disassembly by gelsolin. Such activity would explain VASP's known physiological role. Here, we test this hypothesis in vitro using either purified recombinant or endogenous platelet VASP by fluorescence microscopy and biochemical assays. VASP inhibited gelsolin's ability to disassemble actin filaments in a dose-dependent fashion. Inhibition was detectable at the low VASP:actin ratio found inside the platelet (1:40 VASP:actin). Gelsolin bound to VASP-actin filaments at least as well as to actin alone. VASP inhibited gelsolin-induced nucleation at higher concentrations (1:5 VASP:actin ratios). VASP's affinity for actin (K(d) approximately 0.07 microM) and its ability to promote polymerization (1:20 VASP actin ratio) were greater with Ca(++)-actin than with Mg(++)-actin (K(d) approximately 1 microM and 1:1 VASP), regardless of the presence of gelsolin. By immunofluorescence, VASP and gelsolin co-localized in the filopodia and lamellipodia of platelets spreading on glass, suggesting that these in vitro interactions could take place within the cell as well. We conclude that VASP stabilizes actin filaments to the severing effects of gelsolin but does not inhibit gelsolin from binding to the filaments. These results suggest a new concept for actin dynamics inside cells: that bundling proteins protect the actin superstructure from disassembly by severing, thereby preserving the integrity of the cytoskeleton.


Subject(s)
Actins/metabolism , Blood Platelets/metabolism , Cell Adhesion Molecules/physiology , Gelsolin/metabolism , Phosphoproteins/physiology , Calcium/metabolism , Cell Adhesion Molecules/metabolism , Cell Nucleus/metabolism , Cytoskeleton/metabolism , Dose-Response Relationship, Drug , Electrophoresis, Polyacrylamide Gel , Gelsolin/isolation & purification , Humans , Kinetics , Listeria/metabolism , Magnesium/metabolism , Microfilament Proteins , Microscopy, Fluorescence , Models, Biological , Peptides/metabolism , Phosphoproteins/metabolism , Pseudopodia/metabolism , Time Factors
12.
Proc Natl Acad Sci U S A ; 97(14): 8146-50, 2000 Jul 05.
Article in English | MEDLINE | ID: mdl-10884436

ABSTRACT

Herpes simplex virus type I (HSV) typically enters peripheral nerve terminals and then travels back along the nerve to reach the neuronal cell body, where it replicates or enters latency. To monitor axoplasmic transport of HSV, we used the giant axon of the squid, Loligo pealei, a well known system for the study of axoplasmic transport. To deliver HSV into the axoplasm, viral particles stripped of their envelopes by detergent were injected into the giant axon, thereby bypassing the infective process. Labeling the viral tegument protein, VP16, with green fluorescent protein allowed viral particles moving inside the axon to be imaged by confocal microscopy. Viral particles moved 2.2 +/- 0.26 micrometer/sec in the retrograde direction, a rate comparable to that of the transport of endogenous organelles and of virus in mammalian neurons in culture. Electron microscopy confirmed that 96% of motile (stripped) viral particles had lost their envelope but retained tegument, and Western blot analysis revealed that these particles had retained protein from capsid but not envelope. We conclude that (i) HSV recruits the squid retrograde transport machinery; (ii) viral tegument and capsid but not envelope are sufficient for this recruitment; and (iii) the giant axon of the squid provides a unique system to dissect the viral components required for transport and to identify the cellular transport mechanisms they recruit.


Subject(s)
Axonal Transport , Axons/virology , Herpesvirus 1, Human/metabolism , Animals , Axons/ultrastructure , Biological Transport , Decapodiformes , Green Fluorescent Proteins , Herpes Simplex Virus Protein Vmw65 , Herpesvirus 1, Human/pathogenicity , Luminescent Proteins , Microinjections , Microscopy, Confocal , Microscopy, Video , Movement
13.
Ann Hum Genet ; 64(Pt 3): 189-96, 2000 May.
Article in English | MEDLINE | ID: mdl-11409409

ABSTRACT

Stereocilia of the inner ear play an integral role in the mechanotransduction of sound. Their structural support is derived from actin filaments and actin-binding proteins. We have identified a novel actin-binding protein, 2E4-kaptin (KPTN), which appears to be involved in this structural network. Using double label immunofluorescence, we now show that KPTN extends beyond the barbed ends of actin filaments at the tips of stereocilia, and using cloned human cDNA, we mapped KPTN to chromosome 19q13.4. A combination of FISH, radiation hybrid mapping and YAC screening localized KPTN between markers D19S412 and NIB1805, making this gene an excellent functional and positional candidate for DFNA4, a form of autosomal dominant non-syndromic hearing loss. We identified a second family with inherited deafness that also maps to the DFNA4 region. To screen KPTN for deafness-causing mutations, we first determined its genomic structure and then completed a mutational analysis by direct sequencing and SSCP in affected family members. Although no deafness-causing mutations were identified in the coding region, KPTN remains an excellent candidate gene for hearing loss; by synteny, its murine orthologue also remains a candidate gene for the Nijmegan waltzer (nv) mouse mutant, which has vestibular defects and a variable sensorineural hearing loss.


Subject(s)
Deafness/genetics , Microfilament Proteins/genetics , Adult , Animals , Chickens , Chromosome Mapping , Chromosomes, Human, Pair 19/genetics , Female , Humans , In Situ Hybridization, Fluorescence , Male , Mice , Microscopy, Fluorescence , Molecular Sequence Data , Pedigree , Polymerase Chain Reaction
14.
J Neurocytol ; 28(2): 85-98, 1999 Feb.
Article in English | MEDLINE | ID: mdl-10590510

ABSTRACT

Axoplasmic organelles move on actin as well as microtubules in vitro and axons contain a large amount of actin, but little is known about the organization and distribution of actin filaments within the axon. Here we undertake to define the relationship of the microtubule bundles typically found in axons to actin filaments by applying three microscopic techniques: laser-scanning confocal microscopy of immuno-labeled squid axoplasm; electronmicroscopy of conventionally prepared thin sections; and electronmicroscopy of touch preparations-a thin layer of axoplasm transferred to a specimen grid and negatively stained. Light microscopy shows that longitudinal actin filaments are abundant and usually coincide with longitudinal microtubule bundles. Electron microscopy shows that microfilaments are interwoven with the longitudinal bundles of microtubules. These bundles maintain their integrity when neurofilaments are extracted. Some, though not all microfilaments decorate with the S1 fragment of myosin, and some also act as nucleation sites for polymerization of exogenous actin, and hence are definitively identified as actin filaments. These actin filaments range in minimum length from 0.5 to 1.5 microm with some at least as long as 3.5 microm. We conclude that the microtubule-based tracks for fast organelle transport also include actin filaments. These actin filaments are sufficiently long and abundant to be ancillary or supportive of fast transport along microtubules within bundles, or to extend transport outside of the bundle. These actin filaments could also be essential for maintaining the structural integrity of the microtubule bundles.


Subject(s)
Actin Cytoskeleton/metabolism , Actins/metabolism , Axons/metabolism , Microtubules/metabolism , Actin Cytoskeleton/ultrastructure , Animals , Axonal Transport , Axons/ultrastructure , Decapodiformes , Microscopy, Confocal , Microscopy, Electron , Microscopy, Interference , Microtubules/ultrastructure , Models, Biological , Neurofibrils/metabolism , Organelles/metabolism
16.
Eur J Cell Biol ; 78(2): 117-26, 1999 Feb.
Article in English | MEDLINE | ID: mdl-10099934

ABSTRACT

Platelet activation, crucial for hemostasis, requires actin polymerization, yet the molecular mechanisms by which localized actin polymerization is mediated are not clear. Here we report the characterization of a novel actin-binding protein, 2E4, originally isolated from human blood platelets and likely to be involved in the actin rearrangements occurring during activation. 2E4 binds to filamentous (F)-actin by F-actin affinity chromatography and is eluted from F-actin affinity columns and extracted from cells with ATP. Its presence at the leading edge of platelets spread on glass and in the lamellipodia of motile fibroblasts suggests a role in actin dynamics. Using localization to obtain clues about function, we stained the sensory epithelium of the embryonic inner ear to determine whether 2E4 is at the barbed end of actin filaments during their elongation. Indeed, 2E4 was present at the tips of the elongating stereocilium. 2E4 is novel by DNA sequence and has no identifiable structural motifs. Its unusual amino acid sequence, its ATP-sensitive actin association and its location at sites of actin polymerization in cells suggest 2E4 plays a unique role in the actin rearrangements that accompany platelet activation and stereocilia formation.


Subject(s)
Blood Platelets/metabolism , Hair Cells, Auditory/metabolism , Microfilament Proteins/metabolism , Pseudopodia/metabolism , Actins/metabolism , Adenosine Triphosphate/pharmacology , Amino Acid Sequence , Animals , Antibodies, Monoclonal , Blood Platelets/chemistry , Cells, Cultured , Chick Embryo , Chromatography, Affinity , Cloning, Molecular , Electrophoresis, Polyacrylamide Gel , Fibroblasts/metabolism , Fluorescent Antibody Technique , Humans , Intestinal Mucosa/metabolism , Mice , Microfilament Proteins/chemistry , Microfilament Proteins/genetics , Microfilament Proteins/immunology , Molecular Sequence Data
17.
Cell Biol Int ; 22(2): 161-73, 1998.
Article in English | MEDLINE | ID: mdl-9878103

ABSTRACT

The squid giant axon provides an excellent model system for the study of actin-based organelle transport likely to be mediated by myosins, but the identification of these motors has proven to be difficult. Here the authors purified and obtained primary peptide sequence of squid muscle myosin as a first step in a strategy designed to identify myosins in the squid nervous system. Limited digestion yielded fourteen peptides derived from the muscle myosin which possess high amino acid sequence identities to myosin II from scallop (60-95%) and chick pectoralis muscle (31-83%). Antibodies generated to this purified muscle myosin were used to isolate a potential myosin from squid optic lobe which yielded 11 peptide fragments. Sequences from six of these fragments identified this protein as a myosin II. The other five sequences matched myosin II (50-60%, identities), and some also matched unconventional myosins (33-50%). A single band that has a molecular weight similar to the myosin purified from optic lobe copurifies with axoplasmic organelles, and, like the optic lobe myosin, this band is also recognized by the antibodies raised against squid muscle myosin II. Hence, this strategy provides an approach to the identification of a myosin associated with motile axoplasmic organelles.


Subject(s)
Decapodiformes/metabolism , Muscle Proteins/chemistry , Muscle, Skeletal/metabolism , Myosins/chemistry , Nerve Tissue Proteins/chemistry , Optic Lobe, Nonmammalian/metabolism , Organelles/chemistry , Protein Isoforms/chemistry , Amino Acid Sequence , Animals , Axons/chemistry , Chickens/metabolism , Microscopy, Electron , Molecular Sequence Data , Mollusca/metabolism , Muscle Proteins/isolation & purification , Muscle Proteins/ultrastructure , Myosins/isolation & purification , Myosins/ultrastructure , Nerve Tissue Proteins/isolation & purification , Nerve Tissue Proteins/ultrastructure , Protein Isoforms/isolation & purification , Protein Isoforms/ultrastructure , Sequence Alignment , Sequence Homology, Amino Acid , Species Specificity
18.
Proc Natl Acad Sci U S A ; 93(12): 6064-8, 1996 Jun 11.
Article in English | MEDLINE | ID: mdl-8650220

ABSTRACT

Organelles in the axoplasm from the squid giant axon move along exogenous actin filaments toward their barbed ends. An approximately 235-kDa protein, the only band recognized by a pan-myosin antibody in Western blots of isolated axoplasmic organelles, has been previously proposed to be a motor for these movements. Here, we purify this approximately 235-kDa protein (p235) from axoplasm and demonstrate that it is a myosin, because it is recognized by a pan-myosin antibody and has an actin-activated Mg-ATPase activity per mg of protein 40-fold higher than that of axoplasm. By low-angle rotary shadowing, p235 differs from myosin II and it does not form bipolar filaments in low salt. The amino acid sequence of a 17-kDa protein that copurifies with p235 shows that it is a squid optic lobe calcium-binding protein, which is more similar by amino acid sequence to calmodulin (69% identity) than to the light chains of myosin II (33% identity). A polyclonal antibody to this light chain was raised by using a synthetic peptide representing the calcium binding domain least similar to calmodulin. We then cloned this light chain by reverse transcriptase-PCR and showed that this antibody recognizes the bacterially expressed protein but not brain calmodulin. In Western blots of sucrose gradient fractions, the 17-kDa protein is found in the organelle fraction, suggesting that it is a light chain of the p235 myosin that is also associated with organelles.


Subject(s)
Axons/metabolism , Calmodulin/metabolism , Myosins/metabolism , Amino Acid Sequence , Animals , Base Sequence , Blotting, Western , Ca(2+) Mg(2+)-ATPase/metabolism , Calmodulin/chemistry , Calmodulin/genetics , Cloning, Molecular , Decapodiformes , Horseshoe Crabs , Molecular Sequence Data , Organelles/metabolism , Sequence Homology, Amino Acid
19.
Cell Motil Cytoskeleton ; 33(2): 106-14, 1996.
Article in English | MEDLINE | ID: mdl-8635200

ABSTRACT

We previously showed that axoplasmic organelles from the squid giant axon move toward the barbed ends of actin filaments and that KI-washed organelles separated from soluble proteins by sucrose density fractionation retain a 235-kDa putative myosin. Here, we examine the myosin-like activities of KI-washed organelles after sucrose density fractionation to address the question whether the myosin on these organelles is functional. By electron microscopy KI-washed organelles bound to actin filaments in the absence of ATP but not in its presence. Analysis of organelle-dependent ATPase activity over time and with varying amounts of organelles revealed a basal activity of 350 (range: 315-384) nmoles Pi/mg/min and an actin-activated activity of 774 (range: 560-988) nmoles/mg/min, a higher specific activity than for the other fractions. By video microscopy washed organelles moved in only one direction on actin filaments with a net velocity of 1.11 +/- .03 microns/s and an instantaneous velocity of 1.63 +/- 0.29 microns/s. By immunogold electronmicroscopy, 7% of KI-washed organelles were decorated with an anti-myosin antibody as compared to 0.5% with non-immune serum. Thus, some axoplasmic organelles have a tightly associated myosin-like activity.


Subject(s)
Actins/physiology , Axonal Transport/drug effects , Organelles/physiology , Adenosine Triphosphate/metabolism , Animals , Antibody Specificity , Axonal Transport/physiology , Ca(2+) Mg(2+)-ATPase/metabolism , Decapodiformes , Enzyme Activation/drug effects , Horseshoe Crabs , Immunohistochemistry , Myosins/analysis , Myosins/immunology , Organelles/enzymology , Potassium Iodide
20.
Biol Bull ; 191(2): 272-273, 1996 Oct.
Article in English | MEDLINE | ID: mdl-29220227
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