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1.
Prikl Biokhim Mikrobiol ; 48(5): 543-9, 2012.
Article in Russian | MEDLINE | ID: mdl-23101393

ABSTRACT

Complex enzymatic preparations demonstrating activities homologous to pectinlyase A and heterologous to endo-1,4-beta-glucanase from Penicilliumverruculosum and beta-glycosidase from Aspergillusniger have been obtained on the basis of recombinant strains of the fungus Penicilliumcanescens. Two approaches were utilized: development of an enzymatic preparation on the basis of a new strain, which produced all three enzymes, and development of an enzymatic preparation via combined cultivation of three strains, each of which produced one of the enzymes.


Subject(s)
Beta vulgaris/metabolism , Cellulase/metabolism , Medical Waste Disposal/methods , Penicillium/enzymology , Polysaccharide-Lyases/metabolism , Base Sequence , Genetic Engineering , Industrial Microbiology/methods , Molecular Sequence Data , Penicillium/genetics
2.
Prikl Biokhim Mikrobiol ; 48(1): 66-73, 2012.
Article in Russian | MEDLINE | ID: mdl-22567887

ABSTRACT

An enzyme preparation has been produced on the basis of Penicillium canescens strains with the activity of cellibiohydrolase I, II; endo-1,4-beta-gluconase of Penicillium verruculosum; and beta-glucosidase of Aspergillus niger. It was shown that for the most effective hydrolysis of aspen wood pulp the optimal ratio of cellobiohydrolase and endo- 1,4-3-gluconase in enzyme preparations was 8 : 2 (by protein). It was also established that the homologous xylanase secreted by the Penicillium canescens fungus is a required component for the enzyme complex for hydrolysis of the hemicellulose matrix of aspen wood.


Subject(s)
Aspergillus niger/enzymology , Cellulose/metabolism , Fungal Proteins/metabolism , Penicillium/enzymology , Populus/chemistry , Wood/chemistry , Aspergillus niger/genetics , Cellulase/genetics , Cellulase/metabolism , Cellulose 1,4-beta-Cellobiosidase/genetics , Cellulose 1,4-beta-Cellobiosidase/metabolism , Chromatography, High Pressure Liquid , Electrophoresis, Polyacrylamide Gel , Endo-1,4-beta Xylanases/genetics , Endo-1,4-beta Xylanases/metabolism , Fungal Proteins/genetics , Hydrolysis , Kinetics , Metabolic Engineering , Penicillium/genetics , Polysaccharides/metabolism , beta-Glucosidase/genetics , beta-Glucosidase/metabolism
3.
Prikl Biokhim Mikrobiol ; 46(3): 397-400, 2010.
Article in Russian | MEDLINE | ID: mdl-20586296

ABSTRACT

Hydrolytic ability of laboratory enzyme preparations from fungus of the Penicillium genus was investigated using kraft pulp from nonbleached softwood and bleached hardwood cellulose as substrates. The enzyme preparations were shown to efficiently hydrolyze both softwood and hardwood cellulose. The yields of glucose and reducing sugars were 24-36 g/l and 27-37 g/l from 100 g/l of dry substrate in 48 h, respectively, and depended on the number of substrate grinding cycles.


Subject(s)
Cellulase/chemistry , Cellulose/chemistry , Conservation of Natural Resources , Paper , Penicillium/enzymology , Hydrolysis
4.
Biochemistry (Mosc) ; 74(8): 882-7, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19817688

ABSTRACT

The gene encoding the xlnR xylanolytic activator of the heterologous fungus Aspergillus niger was incorporated into the Penicillium canescens genome. Integration of the xlnR gene resulted in the increase in a number of activities, i.e. endoxylanase, beta-xylosidase, alpha-L-arabinofuranosidase, alpha-galactosidase, and feruloyl esterase, compared to the host P. canescens PCA 10 strain, while beta-galactosidase, beta-glucosidase, endoglucanase, and CMCase activities remained constant. Two different expression constructs were developed. The first consisted of the nucleotide sequence containing the mature P. canescens phytase gene under control of the axhA promoter region gene encoding A. niger (1,4)-beta-D-arabinoxylan-arabinofuranohydrolase. The second construct combined the P. canescens phytase gene and the bgaS promoter region encoding homologous beta-galactosidase. Both expression cassettes were transformed into P. canescens host strain containing xlnR. Phytase synthesis was observed only for strains with the bgaS promoter on arabinose-containing culture media. In conclusion, the bgaS and axhA promoters were regulated by different inducers and activators in the P. canescens strain containing a structural tandem of the axhA promoter and the gene of the xlnR xylanolytic activator.


Subject(s)
Fungal Proteins/metabolism , Gene Expression Regulation, Fungal , Genes, Regulator , Penicillium/genetics , Trans-Activators/metabolism , Cellulase/genetics , Cellulase/metabolism , Fungal Proteins/genetics , Gene Expression Regulation, Enzymologic , Genetic Engineering , Glycoside Hydrolases/genetics , Glycoside Hydrolases/metabolism , Penicillium/enzymology , Penicillium/metabolism , Promoter Regions, Genetic , Trans-Activators/genetics , alpha-Galactosidase/genetics , alpha-Galactosidase/metabolism , beta-Galactosidase/genetics , beta-Galactosidase/metabolism , beta-Glucosidase/genetics , beta-Glucosidase/metabolism
5.
Prikl Biokhim Mikrobiol ; 42(6): 654-64, 2006.
Article in Russian | MEDLINE | ID: mdl-17168294

ABSTRACT

Six xylan-hydrolyzing enzymes have been isolated from the preparations Celloviridin G20x and Xybeten-Xyl, obtained previously based on the strain Trichoderma longibrachiatum (Trichoderma reesei) TW-1. The enzymes isolated were represented by three xylanases (XYLs), XYL I (20 kDa, pi 5.5), XYL II (21 kDa, pI 9.5), XYL III (30 kDa, pI 9.1); endoglucanase I (EG I), an enzyme exhibiting xylanase activity (57 kDa, pI 4.6); and two exodepolymerases, beta-xylosidase (beta-XYL; 80 kDa, pI 4.5) and alpha-L-arabinofuranosidase I (alpha-L-AF I; 55 kDa, pI 7.4). The substrate specificity of the enzymes isolated was determined. XYL II exhibited maximum specific xylanase activity (190 U/mg). The content of the enzymes in the preparation was assessed. Maximum contributions to the total xylanase activities of the preparations Celloviridin G20x and Xy-beten-Xyl were made by EG I and XYL II, respectively. Effects of temperature and pH on the enzyme activities, their stabilities under various conditions, and the kinetics of exhaustive hydrolysis of glucuronoxylan and arabinoxylan were studied. Combinations of endodepolymerases (XYL I, XYL II, XYL III, or EG I) and exodepolymerases (alpha-L-AF I or beta-XYL) produced synergistic effects on arabinoxylan cleavage. The reverse was the case when endodepolymerases, such as XYL I or EG I, were combined with alpha-L-AF I.


Subject(s)
Fungal Proteins/chemistry , Glycoside Hydrolases/chemistry , Trichoderma/enzymology , Xylans/chemistry , Enzyme Stability , Fungal Proteins/isolation & purification , Glycoside Hydrolases/isolation & purification , Hydrogen-Ion Concentration , Hydrolysis , Multienzyme Complexes/chemistry , Substrate Specificity , Temperature
6.
Prikl Biokhim Mikrobiol ; 42(6): 665-73, 2006.
Article in Russian | MEDLINE | ID: mdl-17168295

ABSTRACT

A fragment of Penicillium canescens genomic DNA carrying the xlnR gene coding for a translational activator of xylanolytic genes was isolated. It was demonstrated that a loss of this function in genetically modified transformants resulted in a drastic decrease in the production of P. canescens major xylanases and had a negative effect on the syntheses of several other extracellular xylanases. An increase in the dose of the xlnR gene elevated the xylanolytic activity as well as the activities of a number of other auxiliary enzymes involved in xylan degradation. The activities of two P. canescens major secreted enzymes--beta-galactosidase and alpha-L-arabinofuranosidase-appeared weakly dependent on the translational activator xlnR.


Subject(s)
Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Fungal , Penicillium/enzymology , Trans-Activators/physiology , Xylosidases/biosynthesis , Amino Acid Sequence , Base Sequence , Gene Deletion , Gene Dosage , Genes, Fungal , Genome, Fungal , Glycoside Hydrolases/biosynthesis , Glycoside Hydrolases/genetics , Molecular Sequence Data , Penicillium/genetics , Trans-Activators/genetics , Transformation, Genetic , Xylans/metabolism , Xylosidases/genetics
7.
Biochemistry (Mosc) ; 70(6): 657-63, 2005 Jun.
Article in English | MEDLINE | ID: mdl-16038608

ABSTRACT

A method for analysis of the component composition of multienzyme complexes secreted by the filamentous fungus Trichoderma reesei was developed. The method is based on chromatofocusing followed by further identification of protein fractions according to their substrate specificity and molecular characteristics of the proteins. The method allows identifying practically all known cellulases and hemicellulases of T. reesei: endoglucanase I (EG I), EG II, EG III, cellobiohydrolase I (CBH I), CBH II, xylanase I (XYL I), XYL II, beta-xylosidase, alpha-L-arabinofuranosidase, acetyl xylan esterase, mannanase, alpha-galactosidase, xyloglucanase, polygalacturonase, and exo-beta-1,3-glucosidase. The component composition of several laboratory and commercial T. reesei preparations was studied and the content of the individual enzymes in these preparations was quantified. The influence of fermentation conditions on the component composition of secreted enzyme complexes was revealed. The characteristic features of enzyme preparations obtained in "cellulase" and "xylanase" fermentation conditions are shown.


Subject(s)
Multienzyme Complexes/isolation & purification , Trichoderma/enzymology , Binding Sites , Blotting, Western , Cellulase/analysis , Electrophoresis, Polyacrylamide Gel , Fermentation/physiology , Multienzyme Complexes/chemistry , Multienzyme Complexes/metabolism , Protein Denaturation , Substrate Specificity
8.
Prikl Biokhim Mikrobiol ; 37(6): 687-93, 2001.
Article in Russian | MEDLINE | ID: mdl-11771322

ABSTRACT

Cellobiase (beta-D-glucosidase) with a molecular weight of 100 kDa and pI 5.2 was isolated from the cellulolytic system of Penicillium verruculosum. Kinetic parameters of enzymatic hydrolysis of cellobiose, gentiobiose, sophorose, and synthetic substrates, i.e. methylumbelliferyl and p-nitrophenyl sugar derivatives were determined. Glucose and D-glucose-delta-lactone competitively inhibited cellobiase (Ki = 0.19 mM and 17 microM, respectively). Glucosyl transfer reactions were studied with cellobiose as a single substrate and in the mixture of cellobiose and methylumbelliferyl cellobioside. The product composition was determined in these systems. The ratio of hydrolysis and transfer reaction rates for cellobiose conversion was calculated.


Subject(s)
Penicillium/chemistry , beta-Glucosidase/isolation & purification , Chromatography, Gel , Isoelectric Focusing , Kinetics , Substrate Specificity , beta-Glucosidase/antagonists & inhibitors , beta-Glucosidase/chemistry
9.
Genetika ; 28(10): 48-57, 1992 Oct.
Article in Russian | MEDLINE | ID: mdl-1468641

ABSTRACT

Plasmid DNA transduction with mini-D3112 delta H, deletion derivative of phage D3112, which lost the genes essential for phage growth but retained the sites required for transposition and packaging was studied. Unlike D3112, mini-D3112 delta H element can transduce plasmids and plasmid markers at frequencies of 10(-5)-10(-8) in rec+ cells of Pseudomonas aeruginosa. Plasmids R1162 and R388 of the size smaller than phage genome were transduced intact. Large plasmids, like RP4 and R151, were deleted under transduction. By this way, we isolated deletion derivatives of RP4. The smallest derivative pN2 contained a 4.5 kb fragment of RP4. Unlike the latter, pN2 plasmid had narrow host range and did not maintain in Escherichia coli cells.


Subject(s)
Bacteriophages/genetics , Plasmids , Pseudomonas aeruginosa/genetics , Transduction, Genetic , DNA, Viral/ultrastructure , Electrophoresis, Agar Gel , Gene Deletion , Microscopy, Electron , Restriction Mapping
10.
Genetika ; 24(12): 2120-6, 1988 Dec.
Article in Russian | MEDLINE | ID: mdl-2855068

ABSTRACT

Using a large group of newly isolated deletion mutants of prophage D3112 the location of all known mutations of D3112 phage was more precisely defined. The mutations affecting establishment of lysogenic state were mapped in two regions of the genome- 0-1.3 and 29-30 kb. The replicative A gene is mapped between 1.3 and 4.9 kb, the second replicative B gene being situated on the right of the A gene, between 4.9 and 9.4 kb. The C gene which is responsible for positive regulation of phage late genes' expression is mapped within the 9-12 kb region. It is suggested that promoter of the gene C is situated within the same interval. Mutations were isolated in the Lys gene which is responsible for host cell lysis. The gene is located within the interval 14-22 kb of the physical map. The order of morphogenetic genes in the late genome region was also established.


Subject(s)
Bacteriophages/genetics , Chromosome Mapping , DNA Transposable Elements , Chromosome Deletion , Lysogeny , Mutation , Promoter Regions, Genetic , Pseudomonas aeruginosa/genetics
11.
Genetika ; 24(5): 956-9, 1988 May.
Article in Russian | MEDLINE | ID: mdl-2843423

ABSTRACT

Two derivatives of D3112 prophage with large internal deletions (mini-D3112) have been constructed. Mini-D3112 delta H is about 3.5 kb long, containing the repressor c1 gene. Mini-D3112 delta E is about 12 kb long, contains the c1 gene, several structural genes and replication gene A. These mini-D3112 are unable to replicate. However, they could replicate and maturated in the presence of the helper D3112cts. Mini-D3112 mediate translocation of the gene argH from the chromosome into the R' plasmids, the translocated fragment being sandwiched between two mini-D3112 genomes.


Subject(s)
Bacteriophages/genetics , DNA Transposable Elements , Genes, Viral , Chromosome Deletion , DNA, Viral/genetics , Genes , Plasmids , Pseudomonas aeruginosa , Suppression, Genetic , Translocation, Genetic
12.
Genetika ; 22(12): 2784-93, 1986 Dec.
Article in Russian | MEDLINE | ID: mdl-3100392

ABSTRACT

Several hybrid RP4 plasmids containing the genome of heat-inducible D3112cts15 phage integrated into 2 different sites of RP4 were selected. It was shown that the plasmids RP4::D3112cts15 mobilized the chromosome of Pseudomonas aeruginosa from many sites located in different chromosome regions. Chromosomal recombinants are, formed at frequencies of about 10(-4) per recipient cell. Analysis of coinheritance of unselected markers showed that the majority of recombinants inherited short donor chromosome fragments (about 5 min). R' plasmids can be easily selected by mating with a rec- recipient. For instance, the frequency of selection of R' plasmids containing argH+ locus was about 10(-5) per donor cell. Conjugative transfer of RP4::D3112cts15 into nonlysogenic strains PAO P. aeruginosa results in partial or complete loss of prophage from a hybrid plasmid. The RP4::D3112cts15 plasmids appear to have retained the broad host range of the original RP4 (they are maintained in P. putida and Escherichia coli).


Subject(s)
Genetic Vectors , Pseudomonas aeruginosa/genetics , R Factors , Bacteriophages/genetics , Cloning, Molecular , Escherichia coli/genetics , Genetic Markers
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