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1.
Phys Rev E Stat Nonlin Soft Matter Phys ; 84(3 Pt 1): 031306, 2011 Sep.
Article in English | MEDLINE | ID: mdl-22060360

ABSTRACT

A method of modifying the roughness of soda-lime glass spheres is presented, with the purpose of tuning interparticle friction. The effect of chemical etching on the surface topography and the bulk frictional properties of grains are systematically investigated. The surface roughness of the grains is measured using white-light interferometry and characterized by the lateral and vertical roughness length scales. The underwater angle of repose is measured to characterize the bulk frictional behavior. We observe that the coefficient of friction depends on the vertical roughness length scale.

2.
Proc Natl Acad Sci U S A ; 103(24): 9118-23, 2006 Jun 13.
Article in English | MEDLINE | ID: mdl-16754868

ABSTRACT

In Arabidopsis thaliana and related plants, glucosinolates are a major component in the blend of secondary metabolites and contribute to resistance against herbivorous insects. Methylthioalkylmalate synthases (MAM) encoded at the MAM gene cluster control an early step in the biosynthesis of glucosinolates and, therefore, are central to the diversification of glucosinolate metabolism. We sequenced bacterial artificial chromosomes containing the MAM cluster from several Arabidopsis relatives, conducted enzyme assays with heterologously expressed MAM genes, and analyzed MAM nucleotide variation patterns. Our results show that gene duplication, neofunctionalization, and positive selection provide the mechanism for biochemical adaptation in plant defense. These processes occur repeatedly in the history of the MAM gene family, indicating their fundamental importance for the evolution of plant metabolic diversity both within and among species.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis , Genetic Variation , Oxo-Acid-Lyases/genetics , Selection, Genetic , Amino Acid Sequence , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/classification , Arabidopsis Proteins/metabolism , Codon , Evolution, Molecular , Glucosinolates/biosynthesis , Molecular Sequence Data , Multigene Family , Oxo-Acid-Lyases/classification , Oxo-Acid-Lyases/metabolism , Phylogeny , Sequence Alignment , Sequence Analysis, DNA
3.
Oecologia ; 146(2): 234-43, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16032437

ABSTRACT

A Sebacinales species was recovered from a clone library made from a pooled rhizosphere sample of Nicotiana attenuata plants from 14 native populations. Axenic cultures of the related species, Piriformospora indica and Sebacina vermifera, were used to examine their effects on plant performance. Inoculation of N. attenuata seeds with either fungus species stimulated seed germination and increased growth and stalk elongation. S. vermifera inoculated plants flowered earlier, produced more flowers and matured more seed capsules than did non-inoculated plants. Jasmonate treatment during rosette-stage growth, which slows growth and elicits herbivore resistance traits, erased differences in vegetative, but not reproductive performance resulting from S. vermifera inoculation. Total nitrogen and phosphorous contents did not differ between inoculated and control plants, suggesting that the performance benefits of fungal inoculation did not result from improvements in nutritional status. Since the expression of trypsin proteinase inhibitors (TPI), defensive proteins which confer resistance to attack from Manduca sexta larvae, incur significant growth and fitness costs for the plant, we examined the effect of S. vermifera inoculation on herbivore resistance and TPI activity. After 10 days of feeding on S. vermifera-inoculated plants, larval mass was 46% higher and TPI activity was 48% lower than that on non-inoculated plants. These results suggest that Sebacina spp. may interfere with defense signaling and allow plants to increase growth rates at the expense of herbivore resistance mediated by TPIs.


Subject(s)
Fungi/physiology , Manduca/physiology , Nicotiana/growth & development , Nicotiana/microbiology , Animals , DNA, Fungal/genetics , DNA, Intergenic/genetics , Fungi/classification , Fungi/genetics , Germination , Nitrogen/metabolism , Phosphorus/metabolism , Phylogeny , Plant Leaves/metabolism , Seeds/growth & development , Seeds/microbiology , Nicotiana/physiology , Trypsin Inhibitors/metabolism
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