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1.
Rapid Commun Mass Spectrom ; 14(3): 161-7, 2000.
Article in English | MEDLINE | ID: mdl-10637422

ABSTRACT

The field of proteomics involves the combined application of advanced separation techniques, mass spectrometry, and bioinformatics tools to characterize proteins in complex biological mixtures. Here we report the identification of nine proteins from the human pituitary proteome, using the proteomics approach. The pituitary proteins were separated by two-dimensional electrophoresis, and were visualized by silver staining. The proteins of interest were subjected to in-gel digestion with trypsin, and the masses of the resulting peptides were determined by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. This tryptic mass map was used to identify the proteins through a search of a protein-sequence database. The identified proteins include important hormones, and enzymes with various catalytic activities. These proteins will be used to construct a two-dimensional reference database of the human pituitary. This database will be employed to study changes in the pituitary proteome that are associated with the formation of pituitary tumors.


Subject(s)
Mass Spectrometry , Pituitary Gland/chemistry , Proteins/analysis , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Databases, Factual , Electrophoresis, Gel, Two-Dimensional , Female , Gene Expression , Glutathione Transferase/analysis , Glutathione Transferase/isolation & purification , Glyceraldehyde-3-Phosphate Dehydrogenases/analysis , Glyceraldehyde-3-Phosphate Dehydrogenases/isolation & purification , Hemoglobins/analysis , Hemoglobins/isolation & purification , Humans , Middle Aged , Peptide Fragments/analysis , Peptide Fragments/isolation & purification , Pituitary Hormones/analysis , Pituitary Hormones/isolation & purification , Pro-Opiomelanocortin/analysis , Pro-Opiomelanocortin/isolation & purification , Proteins/isolation & purification , Silver Staining , Thiolester Hydrolases/analysis , Thiolester Hydrolases/isolation & purification , Ubiquitin Thiolesterase
2.
Neuroimmunomodulation ; 6(4): 261-83, 1999.
Article in English | MEDLINE | ID: mdl-10393513

ABSTRACT

Muramyl peptides are fragments of peptidoglycan from the cell walls of bacteria. Because of their unique chemistry, the immune system recognizes that muramyl peptides are products of bacteria, and it responds by becoming activated to resist infection. This resistance to infection is nonspecific, and extends to unrelated species of bacteria, fungi, and viruses. A key mechanism of the resistance to infection is activation of macrophages. Macrophage activation results in increased production of microbicidal oxygen radicals like superoxide and peroxide, and in increased secretion of inflammatory cytokines like interleukin-1beta and tumor necrosis factor-alpha. These cytokines, besides activating neutrophils, B lymphocytes, and T lymphocytes, act on the central nervous system to induce physiological responses like fever and sleep. These physiological responses also aid in combating infection. Muramyl peptides also activate macrophages and other cells of the immune system to kill cancer cells. Muramyl peptides and similar agents will become more important as therapeutic agents in the future, due to increasing resistance of microbes to antibiotics, and increasing numbers of patients with immunodeficiencies.


Subject(s)
Acetylmuramyl-Alanyl-Isoglutamine/analogs & derivatives , Macrophages/drug effects , Monokines/drug effects , Muramic Acids/pharmacology , Peptidoglycan/chemistry , Sleep/drug effects , Acetylmuramyl-Alanyl-Isoglutamine/pharmacology , Animals , Carbohydrate Sequence , Humans , Immune System/cytology , Immune System/drug effects , Molecular Sequence Data
3.
J Mass Spectrom ; 33(12): 1182-91, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9875522

ABSTRACT

The structures of major muramyl peptides derived from peptidoglycan of the oral pathogen Streptococcus sanguis were determined and the biological activity of the peptides was tested in vitro on human monocytes. The muramyl peptides, produced by muramidase digestion of the purified peptidoglycan, were separated by reversed-phase high-performance liquid chromatography, either in their native form or after reduction with sodium borohydride. Chemical structures of the peptides were elucidated by a combination of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, amino acid analysis, post-source decay analysis and Edman sequencing. The study revealed two distinct monomers: N-acetylglucosaminyl-N-acetylmuramyl-Ala-iGln-Lys(Ala-Ala) (1), where the Ala-Ala is connected to the epsilon-amino group of lysine, and N-acetylglucosaminyl-N-acetylmuramyl-Ala-iGln-Lys(Ala-Ala)-Ala-Ala (2), where an additional dialanyl residue is attached to the lysine alpha-carboxyl group. Two sets of higher oligomers (di-, tri- and tetramers), related structurally to monomers 1 or 2 were also detected. In these oligomers, the monomeric subunits are linked together by Ala-Ala-Ala bridges. The native muramyl peptides primed human monocytes in vitro for the increased production of the microbicidal superoxide radical.


Subject(s)
Muramic Acids/chemistry , Peptidoglycan/chemistry , Streptococcus sanguis/chemistry , Amino Acid Sequence , Biological Assay , Carbohydrate Sequence , Chromatography, High Pressure Liquid , Humans , In Vitro Techniques , Molecular Structure , Monocytes/drug effects , Monocytes/metabolism , Muramic Acids/isolation & purification , Muramic Acids/pharmacology , Peptidoglycan/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Streptococcus sanguis/pathogenicity , Superoxides/metabolism
4.
Methods Enzymol ; 289: 478-99, 1997.
Article in English | MEDLINE | ID: mdl-9353734

ABSTRACT

Fast atom bombardment mass spectrometry plays a continuing and effective role in the rapid and efficient analysis of synthetic peptides. In this article, the basic principles of FAB-MS and FAB-MS/MS are reviewed, and the limitations and pitfalls of the method are discussed. The potential of the technique is illustrated by several selected applications. The molecular weight of a synthetic peptide can be readily and accurately determined by FAB-MS. The sensitivity of the FAB-MS method also makes it extremely useful for the evaluation of the purity of a peptide. FAB-MS/MS allows the elucidation of the primary structure of the target peptide, even in a mixture, and also permits the rapid identification of synthetic side products. Hence, FAB-MS and FAB-MS/MS aid in the unequivocal characterization of synthetic peptides. Furthermore, the information that is gained from the FAB analysis can help to unravel potential problems that may be associated with the synthesis.


Subject(s)
Peptides/chemistry , Spectrometry, Mass, Fast Atom Bombardment/methods , Peptides/chemical synthesis
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