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1.
Bioorg Khim ; 35(6): 808-15, 2009.
Article in Russian | MEDLINE | ID: mdl-20208580

ABSTRACT

The virulent P. aeruginosa bacteriophage SN belongs to the PB1-like species of the Myoviridae family. The comparatively small (66391 bp) DNA genome of this phage encodes 89 predicted open reading frames and the proteome involves more than 20 structural proteins. A 3D model of the phage capsid to approximately 18 A resolution reveals certain peculiarities of capsomer structure typical of only this bacteriophage species. In the present work recombinant structural proteins SN gp22 and gp29 were expressed and purified; and specific polyclonal antibodies were obtained. Immune-electron microscopy of purified phage SN using secondary gold-conjugated antibodies has revealed that gp29 forms a phage sheath, and gp22 decorates the capsid. Precise identification of multicopy major capsid proteins is essential for subsequent construction of gene-engineered phages bearing non-native peptides on their surfaces (phage display).


Subject(s)
Bacteriophages/chemistry , Bacteriophages/ultrastructure , Capsid Proteins/chemistry , Capsid/chemistry , Capsid/ultrastructure , Pseudomonas aeruginosa/virology , Microscopy, Immunoelectron/methods
2.
J Mol Biol ; 288(4): 595-608, 1999 May 14.
Article in English | MEDLINE | ID: mdl-10329166

ABSTRACT

An empty precursor particle called the procapsid is formed during assembly of the single-stranded DNA bacteriophage phiX174. Assembly of the phiX174 procapsid requires the presence of the two scaffolding proteins, D and B, which are structural components of the procapsid, but are not found in the mature virion. The X-ray crystallographic structure of a "closed" procapsid particle has been determined to 3.5 A resolution. This structure has an external scaffold made from 240 copies of protein D, 60 copies of the internally located B protein, and contains 60 copies of each of the viral structural proteins F and G, which comprise the shell and the 5-fold spikes, respectively. The F capsid protein has a similar conformation to that seen in the mature virion, and differs from the previously determined 25 A resolution electron microscopic reconstruction of the "open" procapsid, in which the F protein has a different conformation. The D scaffolding protein has a predominantly alpha-helical fold and displays remarkable conformational variability. We report here an improved and refined structure of the closed procapsid and describe in some detail the differences between the four independent D scaffolding proteins per icosahedral asymmetric unit, as well as their interaction with the F capsid protein. We re-analyze and correct the comparison of the closed procapsid with the previously determined cryo-electron microscopic image reconstruction of the open procapsid and discuss the major structural rearrangements that must occur during assembly. A model is proposed in which the D proteins direct the assembly process by sequential binding and conformational switching.


Subject(s)
Bacteriophage phi X 174/metabolism , Capsid/metabolism , Amino Acid Sequence , Capsid/chemistry , Crystallography, X-Ray , Microscopy, Electron , Models, Molecular , Molecular Sequence Data , Protein Conformation , Virus Assembly
3.
Biochem Biophys Res Commun ; 207(2): 740-6, 1995 Feb 15.
Article in English | MEDLINE | ID: mdl-7864867

ABSTRACT

Protein phosphorylation plays an important role in the regulation of cellular growth and proliferation and is thus thought to play a role in tumorigenesis. It has previously been reported that cells transformed by human cytomegalovirus (HCMV) contain two to four fold higher than normal levels of protein phosphorylation on serine and threonine residues, and two to six fold higher than normal levels of a casein kinase activity. We have now identified the major casein kinase activity found elevated in HCMV transformed cells as casein kinase type II; identification of this kinase was necessary in order to begin to define its role in HCMV mediated morphological transformation. Most of the differences in casein kinase II activity between normal and HCMV transformed cells were explained by differences in casein kinase II protein levels. This represents the first report concerning the elevation of casein kinase II activity in cells transformed by human cytomegalovirus.


Subject(s)
Cell Transformation, Viral , Cytomegalovirus/genetics , Protein Serine-Threonine Kinases/metabolism , Amino Acid Sequence , Casein Kinase II , Cell Line , Cytoplasm/enzymology , Humans , Immunoblotting , Molecular Sequence Data , Peptides/metabolism , Phosphoproteins/metabolism , Phosphorylation , Phosphoserine , Phosphothreonine , Protein Serine-Threonine Kinases/isolation & purification , Substrate Specificity
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