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1.
Mol Cell Biol ; 35(19): 3339-53, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26217012

ABSTRACT

Loss of the RNA-binding protein Bicaudal-C (Bicc1) provokes renal and pancreatic cysts as well as ectopic Wnt/ß-catenin signaling during visceral left-right patterning. Renal cysts are linked to defective silencing of Bicc1 target mRNAs, including adenylate cyclase 6 (AC6). RNA binding of Bicc1 is mediated by N-terminal KH domains, whereas a C-terminal sterile alpha motif (SAM) self-polymerizes in vitro and localizes Bicc1 in cytoplasmic foci in vivo. To assess a role for multimerization in silencing, we conducted structure modeling and then mutated the SAM domain residues which in this model were predicted to polymerize Bicc1 in a left-handed helix. We show that a SAM-SAM interface concentrates Bicc1 in cytoplasmic clusters to specifically localize and silence bound mRNA. In addition, defective polymerization decreases Bicc1 stability and thus indirectly attenuates inhibition of Dishevelled 2 in the Wnt/ß-catenin pathway. Importantly, aberrant C-terminal extension of the SAM domain in bpk mutant Bicc1 phenocopied these defects. We conclude that polymerization is a novel disease-relevant mechanism both to stabilize Bicc1 and to present associated mRNAs in specific silencing platforms.


Subject(s)
RNA, Messenger/metabolism , RNA-Binding Proteins/metabolism , Amino Acid Sequence , Animals , COS Cells , Chlorocebus aethiops , HEK293 Cells , Humans , Kidney/metabolism , Liver/metabolism , Mice, Inbred C57BL , Mice, Knockout , Molecular Docking Simulation , Molecular Sequence Data , Protein Multimerization , Protein Transport , RNA Interference , RNA Transport , RNA, Messenger/genetics , Wnt Signaling Pathway
2.
J Transl Med ; 13: 103, 2015 Mar 30.
Article in English | MEDLINE | ID: mdl-25888842

ABSTRACT

BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is a genetic disorder characterized by numerous fluid-filled cysts that frequently result in end-stage renal disease. While promising treatment options are in advanced clinical development, early diagnosis and follow-up remain a major challenge. We therefore evaluated the diagnostic value of Fetuin-A as a new biomarker of ADPKD in human urine. RESULTS: We found that renal Fetuin-A levels are upregulated in both Pkd1 and Bicc1 mouse models of ADPKD. Measurement by ELISA revealed that urinary Fetuin-A levels were significantly higher in 66 ADPKD patients (17.5 ± 12.5 µg/mmol creatinine) compared to 17 healthy volunteers (8.5 ± 3.8 µg/mmol creatinine) or 50 control patients with renal diseases of other causes (6.2 ± 2.9 µg/mmol creatinine). Receiver operating characteristics (ROC) analysis of urinary Fetuin-A levels for ADPKD rendered an optimum cut-off value of 12.2 µg/mmol creatinine, corresponding to 94% of sensitivity and 60% of specificity (area under the curve 0.74 ; p = 0.0019). Furthermore, urinary Fetuin-A levels in ADPKD patients correlated with the degree of renal insufficiency and showed a significant increase in patients with preserved renal function followed for two years. CONCLUSIONS: Our findings establish urinary Fetuin-A as a sensitive biomarker of the progression of ADPKD. Further studies are required to examine the pathogenic mechanisms of elevated renal and urinary Fetuin-A in ADPKD.


Subject(s)
Disease Progression , Polycystic Kidney, Autosomal Dominant/pathology , Polycystic Kidney, Autosomal Dominant/urine , alpha-2-HS-Glycoprotein/urine , Adult , Aged , Animals , Biomarkers/urine , Disease Models, Animal , Enzyme-Linked Immunosorbent Assay , Female , Humans , Kidney Failure, Chronic/urine , Male , Mice, Knockout , Middle Aged , RNA-Binding Proteins/metabolism , ROC Curve , Up-Regulation
3.
Proc Natl Acad Sci U S A ; 109(4): 1269-74, 2012 Jan 24.
Article in English | MEDLINE | ID: mdl-22232693

ABSTRACT

The mammalian gut harbors a dense microbial community interacting in multiple ways, including horizontal gene transfer (HGT). Pangenome analyses established particularly high levels of genetic flux between Gram-negative Enterobacteriaceae. However, the mechanisms fostering intraenterobacterial HGT are incompletely understood. Using a mouse colitis model, we found that Salmonella-inflicted enteropathy elicits parallel blooms of the pathogen and of resident commensal Escherichia coli. These blooms boosted conjugative HGT of the colicin-plasmid p2 from Salmonella enterica serovar Typhimurium to E. coli. Transconjugation efficiencies of ~100% in vivo were attributable to high intrinsic p2-transfer rates. Plasmid-encoded fitness benefits contributed little. Under normal conditions, HGT was blocked by the commensal microbiota inhibiting contact-dependent conjugation between Enterobacteriaceae. Our data show that pathogen-driven inflammatory responses in the gut can generate transient enterobacterial blooms in which conjugative transfer occurs at unprecedented rates. These blooms may favor reassortment of plasmid-encoded genes between pathogens and commensals fostering the spread of fitness-, virulence-, and antibiotic-resistance determinants.


Subject(s)
Biological Evolution , Colitis/microbiology , Enterobacteriaceae/genetics , Gene Transfer, Horizontal/genetics , Animals , Bacteriocin Plasmids/genetics , Base Sequence , Computational Biology , DNA Primers/genetics , Enterobacteriaceae/growth & development , Escherichia coli/genetics , Mice , Molecular Sequence Data , Oligonucleotide Array Sequence Analysis , Phylogeny , RNA, Ribosomal, 16S/genetics , Salmonella typhimurium/genetics , Sequence Alignment , Sequence Analysis, DNA
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