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1.
BMC Bioinformatics ; 24(1): 365, 2023 Sep 27.
Article in English | MEDLINE | ID: mdl-37759158

ABSTRACT

Echocardiographic interpretation during the prenatal or postnatal period is important for diagnosing cardiac septal abnormalities. However, manual interpretation can be time consuming and subject to human error. Automatic segmentation of echocardiogram can support cardiologists in making an initial interpretation. However, such a process does not always provide straightforward information to make a complete interpretation. The segmentation process only identifies the region of cardiac septal abnormality, whereas complete interpretation should determine based on the position of defect. In this study, we proposed a stacked residual-dense network model to segment the entire region of cardiac and classifying their defect positions to generate automatic echocardiographic interpretation. We proposed the generalization model with incorporated two modalities: prenatal and postnatal echocardiography. To further evaluate the effectiveness of our model, its performance was verified by five cardiologists. We develop a pipeline process using 1345 echocardiograms for training data and 181 echocardiograms for unseen data from prospective patients acquired during standard clinical practice at Muhammad Hoesin General Hospital in Indonesia. As a result, the proposed model produced of 58.17% intersection over union (IoU), 75.75% dice similarity coefficient (DSC), and 76.36% mean average precision (mAP) for the validation data. Using unseen data, we achieved 42.39% IoU, 55.72% DSC, and 51.04% mAP. Further, the classification of defect positions using unseen data had approximately 92.27% accuracy, 94.33% specificity, and 92.05% sensitivity. Finally, our proposed model is validated with human expert with varying Kappa value. On average, these results hold promise of increasing suitability in clinical practice as a supporting diagnostic tool for establishing the diagnosis.


Subject(s)
Echocardiography , Heart , Female , Pregnancy , Humans , Prospective Studies
2.
J Clin Med ; 11(21)2022 Oct 31.
Article in English | MEDLINE | ID: mdl-36362685

ABSTRACT

Early prenatal screening with an ultrasound (US) can significantly lower newborn mortality caused by congenital heart diseases (CHDs). However, the need for expertise in fetal cardiologists and the high volume of screening cases limit the practically achievable detection rates. Hence, automated prenatal screening to support clinicians is desirable. This paper presents and analyses potential deep learning (DL) techniques to diagnose CHDs in fetal USs. Four convolutional neural network architectures were compared to select the best classifier with satisfactory results. Hence, dense convolutional network (DenseNet) 201 architecture was selected for the classification of seven CHDs, such as ventricular septal defect, atrial septal defect, atrioventricular septal defect, Ebstein's anomaly, tetralogy of Fallot, transposition of great arteries, hypoplastic left heart syndrome, and a normal control. The sensitivity, specificity, and accuracy of the DenseNet201 model were 100%, 100%, and 100%, respectively, for the intra-patient scenario and 99%, 97%, and 98%, respectively, for the inter-patient scenario. We used the intra-patient DL prediction model to validate our proposed model against the prediction results of three expert fetal cardiologists. The proposed model produces a satisfactory result, which means that our model can support expert fetal cardiologists to interpret the decision to improve CHD diagnostics. This work represents a step toward the goal of assisting front-line sonographers with CHD diagnoses at the population level.

3.
Sensors (Basel) ; 21(23)2021 Nov 30.
Article in English | MEDLINE | ID: mdl-34884008

ABSTRACT

Accurate segmentation of fetal heart in echocardiography images is essential for detecting the structural abnormalities such as congenital heart defects (CHDs). Due to the wide variations attributed to different factors, such as maternal obesity, abdominal scars, amniotic fluid volume, and great vessel connections, this process is still a challenging problem. CHDs detection with expertise in general are substandard; the accuracy of measurements remains highly dependent on humans' training, skills, and experience. To make such a process automatic, this study proposes deep learning-based computer-aided fetal heart echocardiography examinations with an instance segmentation approach, which inherently segments the four standard heart views and detects the defect simultaneously. We conducted several experiments with 1149 fetal heart images for predicting 24 objects, including four shapes of fetal heart standard views, 17 objects of heart-chambers in each view, and three cases of congenital heart defect. The result showed that the proposed model performed satisfactory performance for standard views segmentation, with a 79.97% intersection over union and 89.70% Dice coefficient similarity. It also performed well in the CHDs detection, with mean average precision around 98.30% for intra-patient variation and 82.42% for inter-patient variation. We believe that automatic segmentation and detection techniques could make an important contribution toward improving congenital heart disease diagnosis rates.


Subject(s)
Deep Learning , Heart Defects, Congenital , Computers , Echocardiography , Female , Fetal Heart/diagnostic imaging , Heart Defects, Congenital/diagnostic imaging , Humans , Image Processing, Computer-Assisted , Pregnancy
4.
Antibiotics (Basel) ; 10(8)2021 Aug 19.
Article in English | MEDLINE | ID: mdl-34439054

ABSTRACT

Prophylactic antibiotic usage during delivery is a common practice worldwide, especially in low- to middle-income countries. Guidelines have been published to reduce antibiotic overuse; however, data describing the use of prophylactic antibiotics and clinician adherence to guidelines in low- to middle-income countries remain limited. This study aimed to describe the prevalence of prophylactic antibiotic use, factors associated with its use, and clinician adherence to guidelines. A retrospective review was conducted for all deliveries from 1 January 2016 to 31 December 2018 at a tertiary level hospital in Indonesia. The prevalence of prophylactic antibiotic use during delivery was 47.1%. Maternal education level, Ob/Gyn specialist-led delivery, a history of multiple abortions, C-section, premature membrane rupture, and antepartum hemorrhage were independently associated with prophylactic antibiotic use. Clinician adherence to the guidelines was 68.9%. Adherence to guidelines was the lowest in conditions where the patient had only one indication for prophylactic antibiotics (aOR 0.36, 95% CI 0.24-0.54). The findings showed that the prevalence of prophylactic antibiotic use during delivery was moderate to high. Adherence to local guidelines was moderate. Updating the local prescribing guidelines may improve clinician adherence.

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