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1.
Chemistry ; 29(43): e202300811, 2023 Aug 01.
Article in English | MEDLINE | ID: mdl-37195577

ABSTRACT

The performance of six newly synthesized benzo[h]quinoline-derived acetonitrilo pentamethylcyclopentadienyl iridium(III) tetrakis(3,5-bis-trifluoromethylphenyl)borate salts bearing different substituents -X (-OMe, -H, -Cl, -Br, -NO2 and -(NO2 )2 ) on the heterochelating ligand were evaluated in the dehydro-O-silylation of benzyl alcohol and the monohydrosilylation of 4-methoxybenzonitrile by Et3 SiH, two reactions involving the electrophilic activation of the Si-H bond. The benchmark shows a direct dependence of the catalytic efficiency with the electronic effect of -X, which is confirmed by theoretical assessment of the intrinsic silylicities Π of hydridoiridium(III)-silylium adducts and by the theoretical evaluation of the propensity of hydridospecies to transfer the hydrido ligand to the activated substrate. The revisited analysis of the Ir-Si-H interactions shows that the most cohesive bond in hydridoiridium(III)-silylium adducts is the Ir-H one, while the Ir-Si is a weak donor-acceptor dative bond. The Si…H interaction in all the cases is noncovalent in nature and dominated by electrostatics confirming the heterolytic cleavage of the hydrosilane's Si-H bond in this key catalytically relevant species.

2.
Nat Commun ; 13(1): 1496, 2022 03 21.
Article in English | MEDLINE | ID: mdl-35314701

ABSTRACT

The presence of phosphate from different origins (inorganic, bioorganic) is found more and more in calcium carbonate-based biominerals. Phosphate is often described as being responsible for the stabilization of the transient amorphous calcium carbonate phase. In order to specify the composition of the mineral phase deposited at the onset of carbonated shell formation, the present study investigates, down to the nanoscale, the growing shell from the European abalone Haliotis tuberculata, using a combination of solid state nuclear magnetic resonance, scanning transmission electron microscope and spatially-resolved electron energy loss spectroscopy techniques. We show the co-occurrence of inorganic phosphate with calcium and carbonate throughout the early stages of abalone shell formation. One possible hypothesis is that this first-formed mixed mineral phase represents the vestige of a shared ancestral mineral precursor that appeared early during Evolution. In addition, our findings strengthen the idea that the final crystalline phase (calcium carbonate or phosphate) depends strongly on the nature of the mineral-associated proteins in vivo.


Subject(s)
Calcium Carbonate , Gastropoda , Animals , Calcium Carbonate/chemistry , Calcium Phosphates/chemistry , Carbonates , Gastropoda/genetics , Minerals/chemistry , Phosphates
3.
Chem Commun (Camb) ; 55(79): 11960-11963, 2019 Oct 01.
Article in English | MEDLINE | ID: mdl-31531448

ABSTRACT

Polydopamine-coated polyurethane open cell foams are used as structured supports for molecular catalysts through the covalent anchoring of alkoxysilyl arms by the catechol groups of the mussel-inspired layer. This strong bonding prevents their leaching. No alteration of the mechanical properties of the flexible support is observed after repeated uses of the catalytic materials.

4.
Solid State Nucl Magn Reson ; 102: 2-11, 2019 10.
Article in English | MEDLINE | ID: mdl-31216494

ABSTRACT

Biological mineralized tissues are hybrid materials with complex hierarchical architecture composed of biominerals often embedded in an organic matrix. The atomic-scale comprehension of surfaces and organo-mineral interfaces of these biominerals is of paramount importance to understand the ultrastructure, the formation mechanisms as well as the biological functions of the related biomineralized tissue. In this communication we demonstrate the capability of DNP SENS to reveal the fine atomic structure of biominerals, and more specifically their surfaces and interfaces. For this purpose, we studied two key examples belonging to the most significant biominerals family in nature: apatite in bone and aragonite in nacreous shell. As a result, we demonstrate that DNP SENS is a powerful approach for the study of intact biomineralized tissues. Signal enhancement factors are found to be up to 40 and 100, for the organic and the inorganic fractions, respectively, as soon as impregnation time with the radical solution is long enough (between 12 and 24 h) to allow an efficient radical penetration into the calcified tissues. Moreover, ions located at the biomineral surface are readily detected and identified through 31P or 13C HETCOR DNP SENS experiments. Noticeably, we show that protonated anions are preponderant at the biomineral surfaces in the form of HPO42- for bone apatite and HCO32- for nacreous aragonite. Finally, we demonstrate that organo-mineral interactions can be probed at the atomic level with high sensitivity. In particular, reliable 13C-{31P} REDOR experiments are achieved in a few hours, leading to the determination of distances, molar proportion and binding mode of citrate bonded to bone mineral in native compact bone. According to our results, only 80% of the total amount of citrate in bone is directly interacting with bone apatite through two out of three carboxylic groups.


Subject(s)
Magnetic Resonance Spectroscopy , Minerals/chemistry , Animals , Apatites/chemistry , Apatites/metabolism , Cortical Bone/chemistry , Cortical Bone/metabolism , Minerals/metabolism , Sheep , Surface Properties
5.
Biophys J ; 113(6): 1290-1300, 2017 Sep 19.
Article in English | MEDLINE | ID: mdl-28734478

ABSTRACT

The histidine-rich designer peptide LAH4-L1 exhibits antimicrobial and potent cell-penetrating activities for a wide variety of cargo including nucleic acids, polypeptides, adeno-associated viruses, and nanodots. The non-covalent complexes formed between the peptide and cargo enter the cell via an endosomal pathway where the pH changes from neutral to acidic. Here, we investigated the membrane interactions of the peptide with phospholipid bilayers and its membrane topology using static solid-state NMR spectroscopy. Oriented 15N solid-state NMR indicates that in membranes composed of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-L-serine (POPS) 3:1 mol/mole and at neutral pH, the peptide adopts transmembrane topologies. Furthermore, 31P and 2H solid-state NMR spectra show that liquid crystalline 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) and POPC/POPS 3:1 liposomes retain a bilayer macroscopic phase even at the highest peptide concentrations investigated, with an oblate orientational distribution of the phospholipids at a peptide/lipid ratio of 1:5. At pH 5, as it occurs in the endosome, the alignment of LAH4-L1 at a peptide/lipid ratio of 1:25 is predominantly parallel to POPC/POPS 3:1 bilayers (prolate deformation) when at the same time it induces a considerable decrease of the deuterium order parameter of POPC/2H31-POPS 3:1. In addition, when studied in mechanically supported lipid membranes, a pronounced disordering of the phospholipid alignment is observed. In the presence of even higher peptide concentrations, lipid spectra are observed that suggest the formation of magnetically oriented or isotropic bicelles. This membrane-disruptive effect is enhanced for gel phase DMPC membranes. By protonation of the four histidines in acidic environments, the overall charge and hydrophobic moment of LAH4-L1 considerably change, and much of the peptide is released from the cargo. Thus, the amphipathic peptide sequences become available to disrupt the endosomal membrane and to assure highly efficient release from this organelle.


Subject(s)
Antimicrobial Cationic Peptides/chemistry , Cell-Penetrating Peptides/chemistry , Hydrogen-Ion Concentration , Lipid Bilayers/chemistry , Dimyristoylphosphatidylcholine/chemistry , Nuclear Magnetic Resonance, Biomolecular , Phosphatidylcholines/chemistry , Phosphatidylserines/chemistry
6.
J Colloid Interface Sci ; 469: 184-190, 2016 May 01.
Article in English | MEDLINE | ID: mdl-26890383

ABSTRACT

"Polydopamine" (PDA) is the oxidation product of dopamine and can be obtained as thin films covering the surface of all kinds of known materials and simultaneously as insoluble and useless precipitates from dopamine solutions in the presence of appropriate oxidants. The valorization of such precipitates to obtain stable suspensions of functional nanomaterials is highly desirable owing to the chemical and optical properties of PDA. We show that a vast repertoire of polyelectrolytes polycations as well as polyanions, allow to control the size of PDA particles in the 10-100 nm size range. Simultaneously to the production of smaller nanoparticles, a progressive inhibition of PDA deposition on the surface of quartz plates (as well as on the surface of the reaction vessel) is found as the concentration of the polyelectrolytes is increased in the dopamine solution. The mechanism of size control-inhibition of film deposition is investigated in the particular case of poly(allylamine) but remains not understood in the case of polyanions.

7.
Amino Acids ; 48(1): 307-18, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26347373

ABSTRACT

Recently, a designed class of efficient analgesic drugs derived from an endogenous neuropeptide, kyotorphin (KTP, Tyr-Arg) combining C-terminal amidation (KTP-NH2) and N-terminal conjugation to ibuprofen (Ib), IbKTP-NH2, was developed. The Ib moiety is an enhancer of KTP-NH2 analgesic action. In the present study, we have tested the hypothesis that KTP-NH2 is an enhancer of the Ib anti-inflammatory action. Moreover, the impact of the IbKTP-NH2 conjugation on microcirculation was also evaluated by a unified approach based on intravital microscopy in the murine cremasteric muscle. Our data show that KTP-NH2 and conjugates do not cause damage on microcirculatory environment and efficiently decrease the number of leukocyte rolling induced by lipopolysaccharide (LPS). Isothermal titration calorimetry showed that the drugs bind to LPS directly thus contributing to LPS aggregation and subsequent elimination. In a parallel study, molecular dynamics simulations and NMR data showed that the IbKTP-NH2 tandem adopts a preferential "stretched" conformation in lipid bilayers and micelles, with the simulations indicating that the Ib moiety is anchored in the hydrophobic core, which explains the improved partition of IbKTP-NH2 to membranes and the permeability of lipid bilayers to this conjugate relative to KTP-NH2. The ability to bind glycolipids concomitant to the anchoring in the lipid membranes through the Ib residue explains the analgesic potency of IbKTP-NH2 given the enriched glycocalyx of the blood-brain barrier cells. Accumulation of IbKTP-NH2 in the membrane favors both direct permeation and local interaction with putative receptors as the location of the KTP-NH2 residue of IbKTP-NH2 and free KTP-NH2 in lipid membranes is the same.


Subject(s)
Analgesics/chemistry , Anti-Inflammatory Agents/chemistry , Endorphins/metabolism , Lipid Bilayers/metabolism , Analgesics/metabolism , Animals , Anti-Inflammatory Agents/metabolism , Endorphins/chemistry , Female , Lipid Bilayers/chemistry , Lipopolysaccharides/chemistry , Lipopolysaccharides/metabolism , Male , Mice , Molecular Dynamics Simulation , Molecular Structure
8.
Biophys J ; 107(4): 901-11, 2014 Aug 19.
Article in English | MEDLINE | ID: mdl-25140425

ABSTRACT

Phylloseptin-1, -2, and -3 are three members of the family of linear cationic antimicrobial peptides found in tree frogs. The highly homologous peptides encompass 19 amino acids, and only differ in the amino acid composition and charge at the six most carboxy-terminal residues. Here, we investigated how such subtle changes are reflected in their membrane interactions and how these can be correlated to their biological activities. To this end, the three peptides were labeled with stable isotopes, reconstituted into oriented phospholipid bilayers, and their detailed topology determined by a combined approach using (2)H and (15)N solid-state NMR spectroscopy. Although phylloseptin-2 and -3 adopt perfect in-plane alignments, the tilt angle of phylloseptin-1 deviates by 8° probably to assure a more water exposed localization of the lysine-17 side chain. Furthermore, different azimuthal angles are observed, positioning the amphipathic helices of all three peptides with the charged residues well exposed to the water phase. Interestingly, our studies also reveal that two orientation-dependent (2)H quadrupolar splittings from methyl-deuterated alanines and one (15)N amide chemical shift are sufficient to unambiguously determine the topology of phylloseptin-1, where quadrupolar splittings close to the maximum impose the most stringent angular restraints. As a result of these studies, a strategy is proposed where the topology of a peptide structure can be determined accurately from the labeling with (15)N and (2)H isotopes of only a few amino acid residues.


Subject(s)
Antimicrobial Cationic Peptides/chemistry , Lipid Bilayers/chemistry , Magnetic Resonance Spectroscopy/methods , Computer Simulation , Deuterium/chemistry , Models, Chemical , Nitrogen Radioisotopes/chemistry , Phospholipids/chemistry
9.
J Colloid Interface Sci ; 431: 176-9, 2014 Oct 01.
Article in English | MEDLINE | ID: mdl-24997433

ABSTRACT

Anionic and cationic surfactants such as sodium dodecylsulfate (SDS) and hexadecyltrimethylammonium bromide (HTAB) are able to control the size of "polydopamine" particles produced from dopamine solutions and to simultaneously strongly inhibit the deposition of "polydopamine" on surfaces. Indeed, dynamic light scattering experiments allowed to show that the hydrodynamic radius of polydopamine progressively decreases from about 1 µm to a few nanometer upon an increase in the SDS and CTAB concentration. At the highest surfactant concentration used (50 mM) the size of the aggregates is only slightly larger than the size of the surfactant micelles. On the other hand, the non-ionic Triton X-100 surfactant has no significant influence on both phenomena. It is suggested that the observed effect originates from the anionic and cationic surfactants acting as a template in which the growth of "polydopamine" is confined.


Subject(s)
Detergents/chemistry , Dopamine/chemistry , Melanins/chemistry , Membranes, Artificial , Micelles , Cetrimonium , Cetrimonium Compounds/chemistry , Octoxynol/chemistry , Sodium Dodecyl Sulfate/chemistry
10.
Solid State Nucl Magn Reson ; 61-62: 15-8, 2014.
Article in English | MEDLINE | ID: mdl-24746715

ABSTRACT

Solid-state NMR spectroscopy has much advanced during the last decade and provides a multitude of data that can be used for high-resolution structure determination of biomolecules, polymers, inorganic compounds or macromolecules. In some cases the chemical shift referencing has become a limiting factor to the precision of the structure calculations and we have therefore evaluated a number of methods used in proton-decoupled (15)N solid-state NMR spectroscopy. For (13)C solid-state NMR spectroscopy adamantane is generally accepted as an external standard, but to calibrate the (15)N chemical shift scale several standards are in use. As a consequence the published chemical shift values exhibit considerable differences (up to 22 ppm). In this paper we report the (15)N chemical shift of several commonly used references compounds in order to allow for comparison and recalibration of published data and future work. We show that (15)NH4Cl in its powdered form (at 39.3 ppm with respect to liquid NH3) is a suitable external reference as it produces narrow lines when compared to other reference compounds and at the same time allows for the set-up of cross-polarization NMR experiments. The compound is suitable to calibrate magic angle spinning and static NMR experiments. Finally the temperature variation of (15)NH4Cl chemical shift is reported.


Subject(s)
Nuclear Magnetic Resonance, Biomolecular/methods , Chemical Phenomena , Nitrogen Isotopes
11.
Dalton Trans ; 43(9): 3722-9, 2014 Mar 07.
Article in English | MEDLINE | ID: mdl-24434813

ABSTRACT

The one-step synthesis of a mesoporous silica of SBA type, functionalized with a 1-(2,6-diisopropylphenyl)-3-propyl-imidazolium (iPr2Ar-NHC-propyl) cation located in the pore channels, is described. This material was obtained by the direct hydrolysis and co-condensation of tetraethylorthosilicate (TEOS) and 1-(2,6-diisopropylphenyl)-3-[3-(triethoxysilyl)propyl]-imidazolium iodide in the presence of Pluronic P123 as a non-ionic structure-directing agent and aqueous HCl (37%) as an acid catalyst. Small-angle X-ray diffraction measurements, scanning and transmission electron microscopies, as well as dinitrogen sorption analyses revealed that the synthesized material is highly mesoporous with a 2D hexagonal arrangement of the porous network. (13)C and (29)Si CP-MAS NMR spectroscopy confirmed that the material contains intact iPr2Ar-NHC-propyl cations, which are covalently anchored via silicon atoms fused into the silica matrix. Moreover, comparison of the latter data with those of an analogous post-synthetic grafted SBA-NHC material allowed us to establish that, as expected, (i) it is most probably more homogeneous and (ii) it shows a more robust anchoring of the organic units. Finally, elemental mapping by energy dispersive X-ray spectroscopy in the scanning electron microscope demonstrated a very homogeneous distribution of the imidazolium units within the one-pot material, moreover with a high content. This study thus demonstrates that a relatively bulky and hydrophilic imidazolium unit can be directly co-condensed with TEOS in the presence of a structure-directing agent to provide in a single step a highly ordered and homogeneous mesoporous hybrid SBA-NHC material, possessing a significant number of cationic NHC sites.

12.
Biochim Biophys Acta ; 1818(5): 1165-72, 2012 May.
Article in English | MEDLINE | ID: mdl-22252270

ABSTRACT

SP-B(CTERM) is a cationic amphipathic helical peptide and functional fragment composed of residues 63 to 78 of surfactant protein B (SP-B). Static oriented and magic angle spinning solid state NMR, along with molecular dynamics simulation was used to investigate its structure, orientation, and depth in lipid bilayers of several compositions, namely POPC, DPPC, DPPC/POPC/POPG, and bovine lung surfactant extract (BLES). In all lipid environments the peptide was oriented parallel to the membrane surface. While maintaining this approximately planar orientation, SP-B(CTERM) exhibited a flexible topology controlled by subtle variations in lipid composition. SP-B(CTERM)-induced lipid realignment and/or conformational changes at the level of the head group were observed using (31)P solid-state NMR spectroscopy. Measurements of the depth of SP-B(CTERM) indicated the peptide center positions ~8Å more deeply than the phosphate headgroups, a topology that may allow the peptide to promote functional lipid structures without causing micellization upon compression.


Subject(s)
Lipid Bilayers/chemistry , Lung/chemistry , Pulmonary Surfactant-Associated Protein B/chemistry , Animals , Cattle , Lipid Bilayers/metabolism , Lung/metabolism , Nuclear Magnetic Resonance, Biomolecular , Protein Structure, Secondary , Pulmonary Surfactant-Associated Protein B/metabolism , Structure-Activity Relationship
13.
Mater Sci Eng C Mater Biol Appl ; 32(7): 2103-2108, 2012 Oct 01.
Article in English | MEDLINE | ID: mdl-34062702

ABSTRACT

Among various atmospheric pressure plasma deposition techniques, the so-called "Atmospheric Pressure Plasma Dielectric Barrier Discharges" (APDBD) has recently received a lot of attention due to the easy ignition of a stable discharge and its scalability. In the present work we aim at designing plasma polymer based films for biomedical applications, in which the drug to be released will be directly incorporated in the film during its deposition. Plasma polymer films made of methacrylic acid (MAA) and of ethylene glycol dimethacrylate (EGDMA) were prepared, allowing to obtain smart coatings able to release the molecule of interest, acetaminophen. A combination of different analytic tools shows that the functional groups of the film are well preserved with respect to the monomer structure and that the drug initially put in the gas phase is embedded in the plasma film with its structure being preserved. The physical and chemical characteristics of the elaborated film allowed for the progressive release of acetaminophen by simply dipping the film into a deionized water solution. However only 8% of the acetaminophen present in the monomer mixture could be released slowly in the presence of water. The significance of this result will be discussed.

14.
J Pept Sci ; 17(2): 88-93, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21234979

ABSTRACT

A family of His-rich peptides has been shown to complex DNA and efficiently deliver these nucleic acids into eukaryotic cells. Therefore, these nanoscale complexes have potential applications in gene therapy. Here, we review a number of spectroscopic and biophysical investigations aimed at characterizing the supramolecular interactions of the peptides with the nucleic acids and when overcoming the membrane barriers of the cell. Furthermore, solid-state NMR distance measurements for the first time reveal close interatomic distances between the amino acid side chains and the DNA phosphates within the transfection complex. A recent study indicates that the peptides are also potent transfectants of siRNAs and they could thereby be of potential interest for gene silencing therapies using these compounds. Copyright © 2010 European Peptide Society and John Wiley & Sons, Ltd.


Subject(s)
Nanostructures/chemistry , Peptide Nucleic Acids/chemistry , Transfection/methods , Calorimetry , Magnetic Resonance Spectroscopy
15.
Methods Mol Biol ; 618: 209-33, 2010.
Article in English | MEDLINE | ID: mdl-20094867

ABSTRACT

Solid-state NMR and other biophysical investigations have revealed many mechanistic details about the interactions of antimicrobial peptides with membranes. These studies have shaped our view on how these peptides cause the killing of bacteria, fungi, or tumour cells and how they permeabilize model membranes. As a result, we better understand the biological activities of these peptides and we are now able to design new and better sequences. Here we present some of the tools that have allowed these solid-state NMR investigations, including detailed protocols on how to reconstitute the peptides into oriented or non-oriented membranes as well as simple set-up procedures for (2)H as well as proton-decoupled (31)P or (15)N solid-state NMR measurements. Static and magic angle spinning experiments are described. Where adequate, the special requirements for or limitations of some of the measurements are discussed. Solid-state NMR spectra of both lipids and peptides have been recorded, and through the ensemble of measurements a detailed picture of these complex peptide-lipid supramolecular systems has finally emerged.


Subject(s)
Antimicrobial Cationic Peptides/chemistry , Lipid Bilayers/chemistry , Nuclear Magnetic Resonance, Biomolecular/methods
16.
J Biomol NMR ; 45(4): 373-87, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19823773

ABSTRACT

In protein NMR spectroscopy the chemical shift provides important information for the assignment of residues and a first structural evaluation of dihedral angles. Furthermore, angular restraints are obtained from oriented samples by solution and solid-state NMR spectroscopic approaches. Whereas the anisotropy of chemical shifts, quadrupolar couplings and dipolar interactions have been used to determine the structure, dynamics and topology of oriented membrane polypeptides using solid-state NMR spectroscopy similar concepts have been introduced to solution NMR through the measurements of residual dipolar couplings. The analysis of (15)N chemical shift spectra depends on the accuracy of the chemical shift tensors. When investigating alamethicin and other peptaibols, i.e. polypeptides rich in alpha-aminoisobutyric acid (Aib), the (15)N chemical shift tensor of this C(alpha)-tetrasubstituted amino acid exhibits pronounced differences when compared to glycine, alanine and other proteinogenic residues. Here we present an experimental investigation on the (15)N amide Aib tensor of N-acetyl-Aib-OH and for the Aib residues within peptaibols. Furthermore, a statistical analysis of the tensors published for di- (glycine) and tri-substituted residues has been performed, where for the first time the published data sets are compiled using a common reference. The size of the isotropic chemical shift and main tensor elements follows the order di- < tri- < tetra-substituted amino acids. A (15)N chemical shift-(1)H-(15)N dipolar coupling correlation NMR spectrum of alamethicin is used to evaluate the consequences of variations in the main tensor elements for the structural analysis of this membrane peptide.


Subject(s)
Amino Acids/chemistry , Aminoisobutyric Acids/chemistry , Nuclear Magnetic Resonance, Biomolecular/methods , Peptaibols/chemistry , Membrane Proteins , Molecular Structure , Nitrogen Isotopes
17.
Proc Natl Acad Sci U S A ; 106(39): 16639-44, 2009 Sep 29.
Article in English | MEDLINE | ID: mdl-19805350

ABSTRACT

The heterodimeric antimicrobial peptide distinctin is composed of 2 linear peptide chains of 22- and 25-aa residues that are connected by a single intermolecular S-S bond. This heterodimer has been considered to be a unique example of a previously unrecorded class of bioactive peptides. Here the 2 distinctin chains were prepared by chemical peptide synthesis in quantitative amounts and labeled with (15)N, as well as (15)N and (2)H, at selected residues, respectively, and the heterodimer was formed by oxidation. CD spectroscopy indicates a high content of helical secondary structures when associated with POPC/POPG 3:1 vesicles or in membrane-mimetic environments. The propensity for helix formation follows the order heterodimer >chain 2 >chain 1, suggesting that peptide-peptide and peptide-lipid interactions both help in stabilizing this secondary structure. In a subsequent step the peptides were reconstituted into oriented phospholipid bilayers and investigated by (2)H and proton-decoupled (15)N solid-state NMR spectroscopy. Whereas chain 2 stably inserts into the membrane at orientations close to perfectly parallel to the membrane surface in the presence or absence of chain 1, the latter adopts a more tilted alignment, which further increases in the heterodimer. The data suggest that membrane interactions result in considerable conformational rearrangements of the heterodimer. Therefore, chain 2 stably anchors the heterodimer in the membrane, whereas chain 1 interacts more loosely with the bilayer. These structural observations are consistent with the antimicrobial activities when the individual chains are compared to the dimer.


Subject(s)
Amphibian Proteins/chemistry , Anti-Infective Agents/chemistry , Antimicrobial Cationic Peptides/chemistry , Membrane Proteins/chemistry , Circular Dichroism , Models, Biological , Nuclear Magnetic Resonance, Biomolecular , Oxidation-Reduction , Protein Conformation
18.
Biophys J ; 96(1): 86-100, 2009 Jan.
Article in English | MEDLINE | ID: mdl-18835909

ABSTRACT

Ampullosporin A and alamethicin are two members of the peptaibol family of antimicrobial peptides. These compounds are produced by fungi and are characterized by a high content of hydrophobic amino acids, and in particular the alpha-tetrasubstituted amino acid residue ?-aminoisobutyric acid. Here ampullosporin A and alamethicin were uniformly labeled with (15)N, purified and reconstituted into oriented phophatidylcholine lipid bilayers and investigated by proton-decoupled (15)N and (31)P solid-state NMR spectroscopy. Whereas alamethicin (20 amino acid residues) adopts transmembrane alignments in 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) or 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) membranes the much shorter ampullosporin A (15 residues) exhibits comparable configurations only in thin membranes. In contrast the latter compound is oriented parallel to the membrane surface in 1,2-dimyristoleoyl-sn-glycero-3-phosphocholine and POPC bilayers indicating that hydrophobic mismatch has a decisive effect on the membrane topology of these peptides. Two-dimensional (15)N chemical shift -(1)H-(15)N dipolar coupling solid-state NMR correlation spectroscopy suggests that in their transmembrane configuration both peptides adopt mixed alpha-/3(10)-helical structures which can be explained by the restraints imposed by the membranes and the bulky alpha-aminoisobutyric acid residues. The (15)N solid-state NMR spectra also provide detailed information on the helical tilt angles. The results are discussed with regard to the antimicrobial activities of the peptides.


Subject(s)
Alamethicin/chemistry , Lipid Bilayers/chemistry , Peptides/chemistry , Computer Simulation , Hypocreales , Models, Chemical , Nitrogen Isotopes , Nuclear Magnetic Resonance, Biomolecular , Peptaibols/chemistry , Phosphorus Isotopes , Phosphorylcholine/chemistry , Protein Structure, Secondary , Protons , Tandem Mass Spectrometry , X-Ray Diffraction
19.
J Biol Chem ; 284(1): 119-133, 2009 Jan 02.
Article in English | MEDLINE | ID: mdl-18984589

ABSTRACT

Designed histidine-rich amphipathic cationic peptides, such as LAH4, have enhanced membrane disruption and antibiotic properties when the peptide adopts an alignment parallel to the membrane surface. Although this was previously achieved by lowering the pH, here we have designed a new generation of histidine-rich peptides that adopt a surface alignment at neutral pH. In vitro, this new generation of peptides are powerful antibiotics in terms of the concentrations required for antibiotic activity; the spectrum of target bacteria, fungi, and parasites; and the speed with which they kill. Further modifications to the peptides, including the addition of more hydrophobic residues at the N terminus, the inclusion of a helix-breaking proline residue or using D-amino acids as building blocks, modulated the biophysical properties of the peptides and led to substantial changes in toxicity to human and parasite cells but had only a minimal effect on the antibacterial and antifungal activity. Using a range of biophysical methods, in particular solid-state NMR, we show that the peptides are highly efficient at disrupting the anionic lipid component of model membranes. However, we also show that effective pore formation in such model membranes may be related to, but is not essential for, high antimicrobial activity by cationic amphipathic helical peptides. The information in this study comprises a new layer of detail in the understanding of the action of cationic helical antimicrobial peptides and shows that rational design is capable of producing potentially therapeutic membrane active peptides with properties tailored to their function.


Subject(s)
Anti-Infective Agents/chemistry , Antimalarials/chemistry , Antimicrobial Cationic Peptides/chemistry , Peptides/chemistry , Cell Membrane/chemistry , Histidine/chemistry , Hydrogen-Ion Concentration , Hydrophobic and Hydrophilic Interactions , Protein Structure, Secondary , Structure-Activity Relationship
20.
Biochemistry ; 46(51): 15175-87, 2007 Dec 25.
Article in English | MEDLINE | ID: mdl-18052076

ABSTRACT

Chrysophsin-1 is an amphipathic alpha-helical antimicrobial peptide produced in the gill cells of red sea bream. The peptide has broad range activity against both Gram-positive and Gram-negative bacteria but is more hemolytic than other antimicrobial peptides such as magainin. Here we explore the membrane interaction of chrysophsin-1 and determine its toxicity, in vitro, for human lung fibroblasts to obtain a mechanism for its antimicrobial activity and to understand the role of the unusual C-terminal RRRH sequence. At intermediate peptide concentrations, solid-state NMR methods reveal that chrysophsin-1 is aligned parallel to the membrane surface and the lipid acyl chains in mixed model membranes are destabilized, thereby being in agreement with models where permeabilization is an effect of transient membrane disruption. The C-terminal RRRH sequence was shown to have a large effect on the insertion of the peptide into membranes with differing lipid compositions and was found to be crucial for pore formation and toxicity of the peptide to fibroblasts. The combination of biophysical data and cell-based assays suggests likely mechanisms involved in both the antibiotic and toxic activity of chrysophsins.


Subject(s)
Antimicrobial Cationic Peptides/chemistry , Antimicrobial Cationic Peptides/metabolism , Cell Membrane/metabolism , Histidine/metabolism , Sea Bream , Amino Acid Sequence , Animals , Cell Line , Circular Dichroism , Color , Fibroblasts , Humans , Magnetic Resonance Spectroscopy , Molecular Sequence Data , Protein Structure, Secondary , Spectrometry, Fluorescence , Tryptophan/chemistry
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