Low microbial diversity, yeast prevalence, and nematode-trapping fungal presence in fungal colonization and leaf microbiome of Serjania erecta.

Medicinal plant microbiomes undergo selection due to secondary metabolite presence. Resident endophytic/epiphytic microorganisms directly influence plant's bioactive compound synthesis. Hypothesizing low microbial diversity in Serjania erecta leaves, we assessed leaf colonization by epiphytic and endophytic fungi. Given its traditional medicinal importance, we estimated diversity in the endophytic fungal microbiome. Analyses included scanning electron microscopy (SEM), isolation of cultivable species, and metagenomics. Epiphytic fungi interacted with S. erecta leaf tissues, horizontally transmitted via stomata/trichome bases, expressing traits for nematode trapping. Cultivable endophytic fungi, known for phytopathogenic habits, didn't induce dysbiosis symptoms. This study confirms low leaf microbiome diversity in S. erecta, with a tendency towards more fungal species, likely due to antibacterial secondary metabolite selection. The classification of Halicephalobus sp. sequence corroborated the presence of nematode eggs on the epidermal surface of S. erecta by SEM. In addition, we confirmed the presence of methanogenic archaea and a considerable number of methanotrophs of the genus Methylobacterium. The metagenomic study of endophytic fungi highlighted plant growth-promoting yeasts, mainly Malassezia, Leucosporidium, Meyerozyma, and Hannaella. Studying endophytic fungi and S. erecta microbiomes can elucidate their impact on beneficial bioactive compound production, on the other hand, it is possible that the bioactive compounds produced by this plant can recruit specific microorganisms, impacting the biological system.

Endophytic Fungi Inoculation Reduces Ramulosis Severity in Gossypium hirsutum Plants.

Biotic stress in cotton plants caused by the phytopathogenic fungus Colletotrichum gossypii var. cephalosporioides triggers symptoms of ramulosis, a disease characterized by necrotic spots on young leaves, followed by death of the affected branch's apical meristem, plant growth paralysis, and stimulation of lateral bud production. Severe cases of ramulosis can cause up to 85% yield losses in cotton plantations. Currently, this disease is controlled exclusively by using fungicides. However, few studies have focused on biological alternatives for mitigating the effects of contamination by C. gossypii var. cephalosporioides on cotton plants. Thus, the hypothesis raised is that endophytic fungi isolated from an Arecaceae species (Butia purpurascens), endemic to the Cerrado biome, have the potential to reduce physiological damage caused by ramulosis, decreasing its severity in these plants. This hypothesis was tested using plants grown from seeds contaminated with the pathogen and inoculated with strains of Gibberella moniliformis (BP10EF), Hamigera insecticola (BP33EF), Codinaeopsis sp. (BP328EF), G. moniliformis (BP335EF), and Aspergillus sp. (BP340EF). C. gossypii var. cephalosporioides is a leaf pathogen; thus, the evaluations were focused on leaf parameters: gas exchange, chlorophyll a fluorescence, and oxidative metabolism. The hypothesis that inoculation with endophytic strains can mitigate physiological and photochemical damage caused by ramulosis in cotton was confirmed, as the fungi improved plant growth and stomatal index and density, increased net photosynthetic rate (A) and carboxylation efficiency (A/Ci), and decreased photochemical stress (ABS/RC and DI0/RC) and oxidative stress by reducing enzyme activity (CAT, SOD, and APX) and the synthesis of malondialdehyde (MDA). Control plants developed leaves with a low adaxial stomatal index and density to reduce colonization of leaf tissues by C. gossypii var. cephalosporioides due to the absence of fungal antagonism. The Codinaeopsis sp. strain BP328EF can efficiently inhibit C. gossypii var. cephalosporioides in vitro (81.11% relative inhibition), improve gas exchange parameters, reduce photochemical stress of chlorophyll-a, and decrease lipid peroxidation in attacked leaves. Thus, BP328EF should be further evaluated for its potential effect as a biological alternative for enhancing the resistance of G. hirsutum plants and minimizing yield losses caused by C. gossypii var. cephalosporioides.

Assessment of the Entomopathogenic Potential of Fungal and Bacterial Isolates from Fall Armyworm Cadavers Against Spodoptera frugiperda Caterpillars and the Adult Boll Weevil, Anthonomus grandis.

Increased attention is being focused on the biological control of agricultural pests using microorganisms, owing to their potential as a viable substitute for chemical control methods. Insect cadavers constitute a potential source of entomopathogenic microorganisms. We tested whether bacteria and fungi isolated from Spodoptera frugiperda (JE Smith) cadavers could affect its survival, development, egg-laying pattern, and hatchability, as well as induce mortality in Anthonomus grandis Boheman adults. We isolated the bacteria Enterobacter hormaechei and Serratia marcescens and the fungi Scopulariopsis sp. and Aspergillus nomiae from fall armyworm cadavers and the pest insects were subjected to an artificial diet enriched with bacteria cells or fungal spores to be tested, in the case of S. frugiperda, and only fungal spores in the case of A. grandis. Enterobacter hormaechei and A. nomiae were pathogenic to S. frugiperda, affecting the survival of adults and pupae. The fungus Scopulariopsis sp. does not affect the survival of S. frugiperda caterpillars and pupae; however, due to late action, moths and eggs may be affected. Aspergillus nomiae also increased mortality of A. grandis adults, as well as the development of S. frugiperda in the early stages of exposure to the diet, as indicated by the vertical spore transfer to offspring and low hatchability. Enterobacter hormaechei and A. nomiae are potential biocontrol agents for these pests, and warrant further investigation from a toxicological point of view and subsequently in field tests involving formulations that could improve agricultural sustainability practices.

Light means power: harnessing light spectrum and UV-B to enhance photosynthesis and rutin levels in microtomato plants.

Urban vertical agriculture with lighting system can be an alternative green infrastructure to increase local food production irrespective of environmental and soil conditions. In this system, light quality control can improve the plant physiological performance, well as induce metabolic pathways that contribute to producing phenolic compounds important to human health. Therefore, this study aimed to evaluate the influence of RBW (red, blue and white) and monochromatic (red and blue; R and B, respectively) light associated or not with UV-B on photosynthetic performance and phenolic compound production in microtomato fruits cultivated via vertical agriculture. The experimental design adopted was completely randomized, with six replicates illuminated with 300 µmol·m-2·s-1 light intensities (RBW, RBW + UV, B, B + UV, R, and R + UV), 12 h photoperiod, and 3.7 W·m-2 UV-B irradiation for 1 h daily for the physiological evaluations. Twenty-six days after the installation, gas exchange, chlorophyll a fluorescence and nocturnal breathing were evaluated. Fruits in different ripening stages (green, orange, and red) were collected from microtomato plants grown under with different light qualities, to evaluate the physiological performance. The identification and quantification of the phenolic compound rutin was also performed to investigate their metabolic response. This study identified that plants grown under B + UV had high photosynthetic rates (A=11.57 µmol·m-2·s-1) and the fruits at all maturation stages from plants grown under B and B + UV had high rutin content. Meanwhile, the activation of suppressive mechanisms was necessary in plants grown under R because of the high nocturnal respiration and unregulated quantum yield of the non-photochemical dissipation of the photosystem II. These results highlight the importance of selecting light wavelength for vegetable cultivation to produce fruits with a high content of specialized metabolites that influence color, flavor, and health promotion, which is of special interest to farmers using sustainable cropping systems.

Microbial Inoculation Improves Growth, Nutritional and Physiological Aspects of Glycine max (L.) Merr.

Considering a scenario where there is a low availability and increasing costs of fertilizers in the global agricultural market, as well as a finitude of important natural resources, such as phosphorus (P), this study tested the effect of the inoculation of rhizospheric or endophytic microorganisms isolated from Hymenaea courbaril and Butia purpurascens on the growth promotion of Glycine max (L.) Merr. The tests were conducted in a controlled greenhouse system, and the effects of biofertilization were evaluated using the following parameters: dry biomass, nutritional content, and photochemical and photosynthetic performance of plants. Seed biopriming was performed with four bacterial and four fungal isolates, and the results were compared to those of seeds treated with the commercial product Biomaphos®. Overall, microbial inoculation had a positive effect on biomass accumulation in G. max, especially in strains PA12 (Paenibacillus alvei), SC5 (Bacillus cereus), and SC15 (Penicillium sheari). The non-inoculated control plants accumulated less nutrients, both in the whole plant and aerial part, and had reduced chlorophyll index and low photosynthetic rate (A) and photochemical efficiency. Strains PA12 (P. alvei), SC5 (B. cereus), and 328EF (Codinaeopsis sp.) stood out in the optimization of nutrient concentration, transpiration rate, and stomatal conductance. Plants inoculated with the bacterial strains PA12 (P. alvei) and SC5 (B. cereus) and with the fungal strains 328EF (Codinaeopsis sp.) and SC15 (P. sheari) showed the closest pattern to that observed in plants treated with Biomaphos®, with the same trend of direction of the means associated with chlorophyll index, (A), dry mass, and concentration of important nutrients such as N, P, and Mg. We recommend the use of these isolates in field tests to validate these strains for the production of biological inoculants as part of the portfolio of bioinputs available for G. max.

Effect of Rhizobacteria Inoculation via Soil and Seeds on Glycine max L. Plants Grown on Soils with Different Cropping History.

Field experiments testing the effect of phosphate-solubilizing rhizobacteria (PSRB) should consider the cropping history and the method used to inoculate the strains. We evaluated the hypothesis that PSRB previously isolated from soybean seedlings could be effective in promoting growth in this oilseed crop in soils with different cultivation periods. We also evaluated whether this growth promotion could be influenced by cultivation histories or the inoculation method (via seeds or soil). Thus, we conducted an experiment in five fields cultivating Glycine max during two seasons (2019/2020 and 2020/2021), to test the effectiveness of PSRB (SAF9-Brevibacillus sp., SAF11-Brevibacillus sp., and SAC36-Bacillus velezensis) compared with results observed for the inoculant BiomaPhos (mix of Bacillus subtilis and Bacillus megaterium). The present study was based on the evaluation of vegetative growth, nutritional and yield parameters, and microbial biomass carbon (MBC). PSRB were more effective than, or showed similar effectiveness to, BiomaPhos for most of the evaluated vegetative, nutritional, and yield characteristics. In the fields tested in the summer 2019/2020 crop, SAC36 and SAF9 strains stood out as growth promoters, whereas in the 2020/2021 crop, SAF11, SAC36, and BiomaPhos were notable. There did not seem to be a direct relationship between long histories of soybean cultivation as a monoculture and low yield in the field. However, yield seems to be associated with soil nutritional characters such as Ca, Mg, K, P, cation exchange capacity, and organic matter levels. PSRB inoculation positively affected nodulation (NN) and nodule dry mass (NDM) in the evaluated fields in the 2019/2020 crop, and the aerial part dry mass (APDM), NN, NDM, yield, and MBC of the evaluated fields in the 2020/2021 crop. In contrast, the inoculation method was observed to have a strong effect on APDM, NN, root dry mass, and MBC, as the plants inoculated via seed showed higher mean values than those in the plants inoculated via soil. This study demonstrated the growth-promoting potential of new phosphate-solubilizing strains, which may eventually be incorporated by the biostimulants market to freely compete with BiomaPhos.

The impact of COVID-19 on the indigenous peoples related to air and road networks and habitat loss.

The vegetation loss in the Brazil's Legal Amazon (BLA) in 2020 corresponds to the highest loss observed in a decade, caused by the intensification of fires, mineral extraction activities, and other pressures. The possibility of earning from illegal activities such as deforestation and mining attracts the population to indigenous territories, while fires aggravate respiratory problems and enhance the current COVID-19 crisis. Furthermore, the BLA's road network is usually related to increased deforestation and fires in its areas of influence, and airports are known to contribute to spreading COVID-19 infections worldwide. Therefore, we decided to evaluate the effect of characteristics of Special Indigenous Health Districts (DSEIs) (including population, number of airports, and extent of the road network) and vegetation loss rates (deforestation, and area of vegetation lost by fires and mining) on the number of COVID-19 cases and deaths among the indigenous population in DSEIs in the BLA. We observed a positive correlation between the number of cases and deaths and the number of Indigenous Primary Healthcare Units, suggesting that many of these units did not increase appropriate activities for prevention and protection from COVID-19 in the DSEIs. The DSEIs with larger air transport and road networks were more affected by COVID-19. These networks constituted critical mechanisms for facilitating the spread of SARS-CoV-2 in the BLA. Additionally, we noted that changes that impact the landscape of DSEIs, such as fires and mining, also impact legal indigenous areas (IAs). Thus, IAs are not spared from exploratory processes in the district's landscape. Models that associate the air transport and road networks with the transformation of the landscape in IAs from burning or mining can explain the number of indigenous people who died due to COVID-19. These results are particularly important given the current disruptive scenario imposed by the Brazilian government on critical institutions that detect and fight fires in indigenous lands and the policies enacted to combat COVID-19 in Brazil, which are based on denying isolation measures and delaying vaccinations.

Efficiency of the Hydroponic System as an Approach to Confirm the Solubilization of CaHPO4 by Microbial Strains Using Glycine max as a Model.

The sustainable development of agriculture can be stimulated by the great market availability of bio-inputs, including phosphate-solubilizing microbial strains. However, these strains are currently selected using imprecise and questionable solubilization methodologies in solid or liquid media. We hypothesized that the hydroponic system could be a more efficient methodology for selecting phosphate-solubilizing strains as plant growth promoters. This methodology was tested using the plant Glycine max as a model. The growth-promoting potential of the strains was compared with that of the Biomaphos® commercial microbial mixture. The obtained calcium phosphate (CaHPO4) solubilization results using the hydroponic system were inconsistent with those observed in solid and liquid media. However, the tests in liquid medium demonstrated poor performances of Codinaeopsis sp. (328EF) and Hamigera insecticola (33EF) in reducing pH and solubilizing CaHPO4, which corroborates with the effects of biotic stress observed in G. max plants inoculated with these strains. Nevertheless, the hydroponic system allowed the characterization of Paenibacillus alvei (PA12), which is also efficient in solubilization in a liquid medium. The bacterium Lysinibacillus fusiformis (PA26) was the most effective in CaHPO4 solubilization owing to the higher phosphorus (P) absorption, growth promotion, and physiological performance observed in plants inoculated with this bacterium. The hydroponic method proved to be superior in selecting solubilizing strains, allowing the assessment of multiple patterns, such as nutritional level, growth, photosynthetic performance, and anatomical variation in plants, and even the detection of biotic stress responses to inoculation, obtaining strains with higher growth promotion potential than Biomaphos®. This study proposed a new approach to confirm the solubilizing activity of microorganisms previously selected in vitro and potentially intended for the bio-input market that are useful in P availability for important crops, such as soybeans.

Parmotrema tinctorum as an indicator of edge effect and air quality in forested areas bordered by intensive agriculture.

Pollutants inhibit thallus growth and development or alter the metabolism and associated anatomical and morphophysiological characteristics of lichens. Since agricultural matrices can act as sources of pollution by dispersing agrochemicals to vegetation fragments, this study tested the hypothesis that Parmotrema tinctorum can serve as the indicator of edge effect in such fragments. In other words, we assumed the impact of pollutant accumulation to be greater at the vegetation edges and explored the utility of this lichen as a bioindicator of pollutants dispersed from agricultural matrices. Differences in the anatomical layers of P. tinctorum thalli sampled from the edge and center of four vegetation fragments (CER, SSF, SSC, and ENP) were evaluated, and the effects of agricultural matrices on macro- and micronutrient levels, heavy metal levels, and photosynthetic pigment content were analyzed. Anatomical layers were thicker in P. tinctorum thalli from the edges of SSC and ENP, indicating the need for photobiont protection at these sites. Edge effect was observed on Al accumulation in the thallus, indicating dispersion of this metal from agricultural matrices and its greater impact in the edge populations. Edge effect was also evident on photosynthetic pigment content, macro- and micronutrient levels, and heavy metal concentration in the thallus, and the values reflected high ecological imbalance currently verified at the edge of ENP, an area of permanent protection. In areas within ENP, chlorophyll a/b ratio reflected stress factors acting on the thallus, indicating that even legally protected areas are not free from the impact of atmospheric pollutants. P. tinctorum may serve as an effective indicator of edge effects and may be used for biomonitoring pollutant dispersion from agricultural matrices.

Morpho-Anatomical and Physiological Responses Can Predict the Ideal Period for the Transplantation of Hydroponic Seedlings of Hymenaea courbaril, a Neotropical Fruit Tree.

Hydroponics is an excellent alternative approach for the production of seedlings, given the growing demand for fruiting trees for the reforestation or recuperation of degraded natural landscapes. In most cases, however, little is known about the optimal period for the maintenance of the seedling in the hydroponic system. Given this, we decided to investigate the hypothesis that morpho-anatomical and physiological alterations can be used to predict the optimal timing for the transplantation of the seedlings to the soil substrate, thereby guaranteeing the most cost-effective application of the hydroponic system. We selected Hymenaea courbaril L., an important Neotropical fruit tree, as the model for this study. We cultivated H. courbaril seedlings in a static hydroponic system and evaluated morpho-anatomical, physiological, and growth parameters over the course of seedling development (30, 60, 90, 120, 150, and 180 days after transplantation; DAT). We observed an interesting relationship between the increase in the density (SD) and conductance (gsw) of the stomata up to 120 DAT, which reflected higher rates of photosynthesis (A), but also a reduced efficiency in the use of water. In the subsequent intervals, the SD of the plants and the diameter of the radicular xylemic vessels elements (RVE) decreased, in an attempt to increase the efficiency of the use of this resource. We also observed an increase in the thickness of the palisade parenchyma (PP) prior to 120 DAT, which did not reflect a general increase in the thickness of the mesophyll, indicating an adjustment in the thickness of the spongiform parenchyma (SP). We also observed a progressive increase in photosynthetic efficiency up to 120 DAT, based on parameters such as the absorption flux energy per active reaction center (ABS/RC) and the photosynthetic performance index (PIABS), but after this period these indices decreased progressively. However, as the PIABS is an indicator of the plant's tolerance, its decline was associated with an increase in the dissipation of energy (DI0/RC), which indicates that, after 120 DAT, the plant pots may become a stress factor that limit the growth of H. courbaril seedlings. The results of the present study indicate conclusively that a 120-day period is the optimum for the maintenance of the H. courbaril seedlings in the hydroponic system, and also confirm the hypothesis that the morpho-anatomical and physiological responses observed in the plants can be used to predict the ideal period for the transplantation of the seedlings, contributing to a reduction in production time of the hydroponic system.

Biocontrol Potential of Sclerotinia sclerotiorum and Physiological Changes in Soybean in Response to Butia archeri Palm Rhizobacteria.

Sclerotinia sclerotiorum is a necrotrophic parasitic fungus that causes Sclerotinia stem rot (SSR), which is currently one of the most difficult agronomic crop diseases to control. A number of plants of the Brazilian Cerrado biome have been shown to be important sources of symbiotic microorganisms with biotechnological potential, so we decided to test the potential of bacteria isolated from the dwarf jelly palm, Butia archeri (Arecaceae) for the control of the pathogenic effects provoked by S. sclerotiorum. For this, we bioprimed seeds and evaluated the effects of this biopriming on the OJIP transient patterns prior to and following infection by the phytopathogen. Plants treated with the BA48R strain of Enterobacter sp., and in particular, those treated with the BA88R strain of Bacillus cereus presented the best results in terms of the loss/gain of the physiological and symptomatological variables evaluated. The plants bioprimed with BA88R presented high post-infection levels of total chlorophyll (33.35 FCIs) and chlorophyll a (26.39 FCIs), maintained a high Nitrogen Balance Index (NBI = 18.87), and synthesized low concentrations of flavonoids (1.39). These plants also maintained high levels of PIABS (1.111) and PITOTAL (1.300) following infection, and low levels of Di0/RC (0.602), which indicates that, in the presence S. sclerotiorum, the efficiency of the photosynthesis in the plants treated with these bacteria was less affected in the reaction centers, as confirmed by the negative amplitude recorded in the L band. The present study reconfirms the importance of the use of chlorophyll fluorescence for the diagnosis of disease and conditions of stress in crop plants, in addition to demonstrating the effectivenesss of the BA48R bacterial strain and, in particular, the BA88R strain on systemic resistance induction and suppression of S. sclerotiorum in Glycine max plants, with enormous potential for the development of more sustainable agricultural processes.