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1.
Opt Lett ; 49(2): 182-185, 2024 Jan 15.
Article in English | MEDLINE | ID: mdl-38194523

ABSTRACT

A hologram reconstruction algorithm is proposed based on the fractional Fourier transform (FRFT) in non-telecentric digital holographic microscopy. The optimal fractional order representing the recorded hologram is estimated based on an evaluation metric. The FRFT-based hologram reconstruction enables noise robust amplitude and phase imaging with enhanced resolution. The effectiveness of the proposed approach is demonstrated in practical scenarios through both simulation and experimental results.

2.
Int J Comput Assist Radiol Surg ; 18(4): 723-732, 2023 Apr.
Article in English | MEDLINE | ID: mdl-36630071

ABSTRACT

PURPOSE: Lymph node (LN) detection is a crucial step that complements the diagnosis and treatments involved during cancer investigations. However, the low-contrast structures in the CT scan images and the nodes' varied shapes, sizes, and poses, along with their sparsely distributed locations, make the detection step challenging and lead to many false positives. The manual examination of the CT scan slices could be time-consuming, and false positives could divert the clinician's focus. To overcome these issues, our work aims at providing an automated framework for LNs detection in order to obtain more accurate detection results with low false positives. METHODS: The proposed work consists of two stages: candidate generation and false positive reduction. The first stage generates volumes of interest (VOI) of probable LN candidates using a modified U-Net with ResNet architecture to obtain high sensitivity but with the cost of increased false positives. The second-stage processes the obtained candidate LNs for false positive reduction using 3D convolutional neural network (CNN) classifier. We further present an analysis of various deep learning models while decomposing 3D VOI into different representations. RESULTS: The method is evaluated on two publicly available datasets containing CT scans of mediastinal and abdominal LNs. Our proposed approach yields sensitivities of 87% at 2.75 false positives per volume (FP/vol.) and 79% at 1.74 FP/vol. with the mediastinal and abdominal datasets, respectively. Our method presented a competitive performance in terms of sensitivity compared to the state-of-the-art methods and encountered very few false positives. CONCLUSION: We developed an automated framework for LNs detection using a modified U-Net with residual learning and 3D CNNs. The results indicate that our method could achieve high sensitivity with relatively low false positives, which helps avoid ineffective treatments.


Subject(s)
Neoplasms , Tomography, X-Ray Computed , Humans , Tomography, X-Ray Computed/methods , Neural Networks, Computer , Lymph Nodes/diagnostic imaging , Mediastinum
3.
Innov Syst Softw Eng ; : 1-14, 2022 Aug 29.
Article in English | MEDLINE | ID: mdl-36060497

ABSTRACT

Hand gestures are useful tools for many applications in the human-computer interaction community. Here, the objective is to track the movement of the hand irrespective of the shape, size and color of the hand. And, for this, a motion template guided by optical flow (OFMT) is proposed. OFMT is a compact representation of the motion information of a gesture encoded into a single image. Recently, deep networks have shown impressive improvements as compared to conventional hand-crafted feature-based techniques. Moreover, it is seen that the use of different streams with informative input data helps to increase the recognition performance. This work basically proposes a two-stream fusion model for hand gesture recognition. The two-stream network consists of two layers-a 3D convolutional neural network (C3D) that takes gesture videos as input and a 2D-CNN that takes OFMT images as input. C3D has shown its efficiency in capturing spatiotemporal information of a video, whereas OFMT helps to eliminate irrelevant gestures providing additional motion information. Though each stream can work independently, they are combined with a fusion scheme to boost the recognition results. We have shown the efficiency of the proposed two-stream network on two databases.

4.
J Imaging ; 8(5)2022 Apr 25.
Article in English | MEDLINE | ID: mdl-35621888

ABSTRACT

Roadway area calculation is a novel problem in remote sensing and urban planning. This paper models this problem as a two-step problem, roadway extraction, and area calculation. Roadway extraction from satellite images is a problem that has been tackled many times before. This paper proposes a method using pixel resolution to calculate the area of the roads covered in satellite images. The proposed approach uses novel U-net and Resnet architectures called U-net++ and ResNeXt. The state-of-the-art model is combined with the proposed efficient post-processing approach to improve the overlap with ground truth labels. The performance of the proposed road extraction algorithm is evaluated on the Massachusetts dataset and it is shown that the proposed approach outperforms the existing solutions which use models from the U-net family.

5.
Rev Sci Instrum ; 93(2): 023504, 2022 Feb 01.
Article in English | MEDLINE | ID: mdl-35232154

ABSTRACT

India is responsible for the supply of diagnostic neutral beam systems for ITER to diagnose its helium ash during the deuterium-tritium plasma phase using the charge exchange recombination spectroscopy technique. Considering the many first of its kind in terms of technologies and beam development aspects, ITER Indian domestic agency has adopted a strategy of developing the technology and beam experimentation in parallel. On the beam development front three test beds, namely, the ROBIN (Rf Operated Beam source in India for Negative ion research), the TWIN (TWo rf driver-based Indigenously built Negative ion source), and the INTF (INdian Test Facility) are presently in their various phases of operation, optimization, and setting up at IPR, respectively. Experiments related to plasma production, beam production, and acceleration up to 30 keV in volume and surface mode have been performed on ROBIN. The maximum negative hydrogen ion current density to a tune of 27 mA/cm2 is obtained in the surface mode with Cs injection. Optimal source performance requires optimal surface conditions, minimum impurities, careful characterization of the plasma, cesium feed and its redistribution, and optimal wall temperatures of the surfaces of the plasma box and the plasma grid. A combination of probe, optical, vacuum, laser based, electrical, and calorimetric diagnostic measurements enables such a control. At ROBIN, the above diagnostics are being used regularly. The operational and diagnostic experiences on ROBIN shall provide the desired experience and database for operations of TWIN and INTF in the coming years. A large number of conventional and advanced diagnostic techniques are used for plasma and beam characterization. These diagnostics are suitable not only to detect and understand the plasma but also for studies related to impurity evolution. The temporal evolution of impurities significantly impacts the plasma and beam properties. The studies help in establishing correlations between physical parameters and operational parameters to optimize the source performance ensuring adequate safety and investment protection. This paper will present a brief overview of various diagnostics implemented, lessons learned, and the results obtained from ROBIN. In addition, an outline of the diagnostics planned for INTF based on the experience and understandings developed during the present experiments on ROBIN and TWIN and considering the requirements of large systems shall be discussed.

6.
Phys Chem Chem Phys ; 24(3): 1569-1579, 2022 Jan 19.
Article in English | MEDLINE | ID: mdl-34940777

ABSTRACT

Here, the first-principles predictions on the structural stability, magnetic behavior and electronic structure of B-site ordered double perovskite Nd2CrFeO6 have been reported. Initially, the ground state of the parent single perovskites NdCrO3 and NdFeO3 has been studied to determine the relevant Hubbard U parameter to investigate the properties of Nd2CrFeO6. The thermodynamic, mechanical, and dynamic stability analyses suggest the possibility of the synthesis of the Nd2CrFeO6 double perovskite at ambient pressure. The compound shows a ferrimagnetic nature with 2 µB net magnetic moment and the magnetic ordering temperature has been estimated to be ∼265 K. The electronic structure indicates a higher probability of direct photon transition over the indirect transition with a band gap of ∼1.85 eV. Additional effects of Nd (4f) spin and spin-orbit coupling on the band edges have been found to be negligible for this 4f-3d-3d spin system. This first-principles investigation predicts that due to the ferrimagnetic nature and a significantly lower band gap compared to those of its antiferromagnetic parent single perovskites, the B-site ordered Nd2CrFeO6 double perovskite could be a promising material for spintronic and visible-light driven energy applications.

7.
SN Comput Sci ; 2(6): 436, 2021.
Article in English | MEDLINE | ID: mdl-34485925

ABSTRACT

Hand gesture recognition is viewed as a significant field of exploration in computer vision with assorted applications in the human-computer communication (HCI) community. The significant utilization of gesture recognition covers spaces like sign language, medical assistance and virtual reality-augmented reality and so on. The underlying undertaking of a hand gesture-based HCI framework is to acquire raw data which can be accomplished fundamentally by two methodologies: sensor based and vision based. The sensor-based methodology requires the utilization of instruments or the sensors to be genuinely joined to the arm/hand of the user to extract information. While vision-based plans require the obtaining of pictures or recordings of the hand gestures through a still/video camera. Here, we will essentially discuss vision-based hand gesture recognition with a little prologue to sensor-based data obtaining strategies. This paper overviews the primary methodologies in vision-based hand gesture recognition for HCI. Major topics include different types of gestures, gesture acquisition systems, major problems of the gesture recognition system, steps in gesture recognition like acquisition, detection and pre-processing, representation and feature extraction, and recognition. Here, we have provided an elaborated list of databases, and also discussed the recent advances and applications of hand gesture-based systems. A detailed discussion is provided on feature extraction and major classifiers in current use including deep learning techniques. Special attention is given to classify the schemes/approaches at various stages of the gesture recognition system for a better understanding of the topic to facilitate further research in this area.

8.
Sci Rep ; 11(1): 4347, 2021 02 23.
Article in English | MEDLINE | ID: mdl-33623086

ABSTRACT

Shape, texture, and color are critical features for assessing the degree of dysplasia in colonic polyps. A comprehensive analysis of these features is presented in this paper. Shape features are extracted using generic Fourier descriptor. The nonsubsampled contourlet transform is used as texture and color feature descriptor, with different combinations of filters. Analysis of variance (ANOVA) is applied to measure statistical significance of the contribution of different descriptors between two colonic polyps: non-neoplastic and neoplastic. Final descriptors selected after ANOVA are optimized using the fuzzy entropy-based feature ranking algorithm. Finally, classification is performed using Least Square Support Vector Machine and Multi-layer Perceptron with five-fold cross-validation to avoid overfitting. Evaluation of our analytical approach using two datasets suggested that the feature descriptors could efficiently designate a colonic polyp, which subsequently can help the early detection of colorectal carcinoma. Based on the comparison with four deep learning models, we demonstrate that the proposed approach out-performs the existing feature-based methods of colonic polyp identification.


Subject(s)
Colonic Polyps/classification , Support Vector Machine , Colonic Polyps/pathology , Databases, Factual , Humans
9.
Plants (Basel) ; 9(12)2020 Dec 04.
Article in English | MEDLINE | ID: mdl-33291816

ABSTRACT

Selenium (Se) is a widely distributed trace element with dual (beneficial or toxic) effects for humans, animals, and plants. The availability of Se in the soil is reliant on the structure of the parental material and the procedures succeeding to soil formation. Anthropogenic activities affect the content of Se in the environment. Although plants are the core source of Se in animal and human diet, the role of Se in plants is still debatable. A low concentration of Se can be beneficial for plant growth, development, and ecophysiology both under optimum and unfavorable environmental conditions. However, excess Se results in toxic effects, especially in Se sensitive plants, due to changing structure and function of proteins and induce oxidative/nitrosative stress, which disrupts several metabolic processes. Contrary, Se hyperaccumulators absorb and tolerate exceedingly large amounts of Se, could be potentially used to remediate, i.e., remove, transfer, stabilize, and/or detoxify Se-contaminants in the soil and groundwater. Thereby, Se-hyperaccumulators can play a dynamic role in overcoming global problem Se-inadequacy and toxicity. However, the knowledge of Se uptake and metabolism is essential for the effective phytoremediation to remove this element. Moreover, selecting the most efficient species accumulating Se is crucial for successful phytoremediation of a particular Se-contaminated area. This review emphasizes Se toxicity in plants and the environment with regards to Se biogeochemistry and phytoremediation aspects. This review follows a critical approach and stimulates thought for future research avenues.

10.
Int J Mol Sci ; 21(22)2020 Nov 18.
Article in English | MEDLINE | ID: mdl-33218014

ABSTRACT

Various environmental stresses singly or in combination generate excess amounts of reactive oxygen species (ROS), leading to oxidative stress and impaired redox homeostasis. Generation of ROS is the obvious outcome of abiotic stresses and is gaining importance not only for their ubiquitous generation and subsequent damaging effects in plants but also for their diversified roles in signaling cascade, affecting other biomolecules, hormones concerning growth, development, or regulation of stress tolerance. Therefore, a good balance between ROS generation and the antioxidant defense system protects photosynthetic machinery, maintains membrane integrity, and prevents damage to nucleic acids and proteins. Notably, the antioxidant defense system not only scavenges ROS but also regulates the ROS titer for signaling. A glut of studies have been executed over the last few decades to discover the pattern of ROS generation and ROS scavenging. Reports suggested a sharp threshold level of ROS for being beneficial or toxic, depending on the plant species, their growth stages, types of abiotic stresses, stress intensity, and duration. Approaches towards enhancing the antioxidant defense in plants is one of the vital areas of research for plant biologists. Therefore, in this review, we accumulated and discussed the physicochemical basis of ROS production, cellular compartment-specific ROS generation pathways, and their possible distressing effects. Moreover, the function of the antioxidant defense system for detoxification and homeostasis of ROS for maximizing defense is also discussed in light of the latest research endeavors and experimental evidence.


Subject(s)
Gene Expression Regulation, Plant , Oxidative Stress , Photosynthesis , Plants/metabolism , Reactive Oxygen Species/metabolism , Signal Transduction
11.
Antioxidants (Basel) ; 9(8)2020 Jul 29.
Article in English | MEDLINE | ID: mdl-32751256

ABSTRACT

Global climate change and associated adverse abiotic stress conditions, such as drought, salinity, heavy metals, waterlogging, extreme temperatures, oxygen deprivation, etc., greatly influence plant growth and development, ultimately affecting crop yield and quality, as well as agricultural sustainability in general. Plant cells produce oxygen radicals and their derivatives, so-called reactive oxygen species (ROS), during various processes associated with abiotic stress. Moreover, the generation of ROS is a fundamental process in higher plants and employs to transmit cellular signaling information in response to the changing environmental conditions. One of the most crucial consequences of abiotic stress is the disturbance of the equilibrium between the generation of ROS and antioxidant defense systems triggering the excessive accumulation of ROS and inducing oxidative stress in plants. Notably, the equilibrium between the detoxification and generation of ROS is maintained by both enzymatic and nonenzymatic antioxidant defense systems under harsh environmental stresses. Although this field of research has attracted massive interest, it largely remains unexplored, and our understanding of ROS signaling remains poorly understood. In this review, we have documented the recent advancement illustrating the harmful effects of ROS, antioxidant defense system involved in ROS detoxification under different abiotic stresses, and molecular cross-talk with other important signal molecules such as reactive nitrogen, sulfur, and carbonyl species. In addition, state-of-the-art molecular approaches of ROS-mediated improvement in plant antioxidant defense during the acclimation process against abiotic stresses have also been discussed.

12.
Physiol Mol Biol Plants ; 26(6): 1139-1154, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32549679

ABSTRACT

Fungicides are widely used for controlling fungi in crop plants. However, their roles in conferring abiotic stress tolerance are still elusive. In this study, the effect of tebuconazole (TEB) and trifloxystrobin (TRI) on wheat seedlings (Triticum aestivum L. cv. Norin 61) was investigated under salt stress. Seedlings were pre-treated for 48 h with fungicide (1.375 µM TEB + 0.5 µM TRI) and then subjected to salt stress (250 mM NaCl) for 5 days. Salt treatment alone resulted in oxidative damage and increased lipid peroxidation as evident by higher malondialdehyde (MDA) and hydrogen peroxide (H2O2) content. Salt stress also decreased the chlorophyll and relative water content and increased the proline (Pro) content. Furthermore, salt stress increased the dehydroascorbate (DHA) and glutathione disulfide (GSSG) content while ascorbate (AsA), the AsA/DHA ratio, reduced glutathione (GSH) and the GSH/GSSG ratio decreased. However, a combined application of TEB and TRI significantly alleviated growth inhibition, photosynthetic pigments and leaf water status improved under salt stress. Application of TEB and TRI also decreased MDA, electrolyte leakage, and H2O2 content by modulating the contents of AsA and GSH, and enzymatic antioxidant activities. In addition, TEB and TRI regulated K+/Na+ homeostasis by improving the K+/Na+ ratio under salt stress. These results suggested that exogenous application of TEB and TRI rendered the wheat seedling more tolerant to salinity stress by controlling ROS and methylglyoxal (MG) production through the regulation of the antioxidant defense and MG detoxification systems.

13.
Plant Physiol Biochem ; 150: 109-120, 2020 May.
Article in English | MEDLINE | ID: mdl-32135476

ABSTRACT

We investigated vanillic acid-induced salt tolerance in tomato by exploring the plant defense systems. Ten-d-old tomato (Solanum lycopersicum L. cv. Pusa Ruby) seedlings were treated with salt (NaCl; 150 mM) and vanillic acid (VA; 40 and 50 µM) separately and in combination with salt. Salinity restricted seedlings growth, biomass accumulation, chlorophyll and carotenoid contents. Salt-induced osmotic stress was indicated by lower leaf relative water content (RWC) and elevated proline (Pro) content, where higher Na+/K+ ratio indicated the ionic toxicity. Tomato seedlings went through oxidative damage due to acute reactive oxygen species (ROS) production and lipoxygenase (LOX) activity and confirmed by higher lipid peroxidation and membrane damage under salinity. Conversely, exogenous VA reduced osmotic and ionic toxicity in stressed-seedlings by enhancing the RWC and Pro level, and lowering Na+/K+ ratio, respectively. Exogenous VA up-regulated the components of antioxidant defense system in salt-treated seedlings resulted in the reduction of ROS production, LOX activity and membrane damage in stressed-seedlings. Additionally, VA application caused the reduction of toxic methylglyoxal accumulation under salt stress through the enhancement of glyoxalase system. Thus, VA-induced alleviation of osmotic, ionic and oxidative stresses leading to improve plant growth and chlorophyll synthesis in stressed-seedlings. So, VA significantly improves salinity tolerance and plant growth performance by involving the actions of plant antioxidant defense and glyoxalase systems.


Subject(s)
Salt Tolerance , Solanum lycopersicum , Vanillic Acid , Solanum lycopersicum/drug effects , Solanum lycopersicum/enzymology , Oxidoreductases/metabolism , Salt Tolerance/drug effects , Seedlings/drug effects , Stress, Physiological/drug effects , Vanillic Acid/pharmacology
14.
Plants (Basel) ; 9(2)2020 Feb 04.
Article in English | MEDLINE | ID: mdl-32033011

ABSTRACT

Cadmium (Cd) is a toxic heavy metal that enters the human food chain from the soil via plants. Increased Cd uptake and translocation in plants alters metabolism andreduces crop production. Maintaining crop yield therefore requires both soil remediation andenhanced plant tolerance to Cd. In this study, we investigated the effects of vanillic acid (VA) on Cd accumulation and Cd stress tolerance in rice (Oryza sativa L. cv. BRRI dhan54). Thirteen-day-old rice seedlings treated with CdCl2 (1.0 and 2.0 mM) for 72 h showed reduced growth, biomass accumulation, and water and photosynthetic pigment contents, as well as increased signs of oxidative stress (elevated levels of malondialdehyde, hydrogen peroxide, methylglyoxal, and lipoxygenase) and downregulated antioxidant and glyoxalase systems. Cadmium-induced changes in leaf relative turgidity, photosynthetic pigment content, ascorbate pool size, and glutathione content were suppressed by VA under both mild and severe Cd toxicity stress. The supplementation of VA under Cd stress conditions also increased antioxidant and glyoxylase enzyme activity. Vanillic acid also increased phytochelatin content and the biological accumulation factor, biological accumulation co-efficient, and Cd translocation factor. Vanillic acid, therefore appears to enhance Cd stress tolerance by increasing metal chelation and sequestration, by upregulating antioxidant defense and glyoxalase systems, and by facilitating nutrient homeostasis.

15.
Plants (Basel) ; 8(10)2019 Oct 18.
Article in English | MEDLINE | ID: mdl-31635412

ABSTRACT

The present study investigated the role of tebuconazole (TEB) and trifloxystrobin (TRI) on cucumber plants (Cucumis sativus L. cv. Tokiwa) under salt stress (60 mM NaCl). The cucumber plants were grown semi-hydroponically in a glasshouse. Plants were exposed to two different doses of fungicides (1.375 µM TEB + 0.5 µM TRI and 2.75 µM TEB + 1.0 µM TRI) solely and in combination with NaCl (60 mM) for six days. The application of salt phenotypically deteriorated the cucumber plant growth that caused yellowing of the whole plant and significantly destructed the contents of chlorophyll and carotenoids. The oxidative damage was created under salinity by increasing the contents of malondialdehyde (MDA), hydrogen peroxide (H2O2), and electrolytic leakage (EL) resulting in the disruption of the antioxidant defense system. Furthermore, in the leaves, stems, and roots of cucumber plants increased Na+ content was observed under salt stress, whereas the K+/Na+ ratio and contents of K+, Ca2+, and Mg2+ decreased. In contrast, the exogenous application of TEB and TRI reduced the contents of MDA, H2O2, and EL by improving the activities of enzymatic and non-enzymatic antioxidants. In addition, ion homeostasis was regulated by reducing Na+ uptake and enhanced K+ accumulation and the K+/Na+ ratio after application of TEB and TRI. Therefore, this study indicates that the exogenous application of TEB and TRI enhanced salt tolerance in cucumber plants by regulating reactive oxygen speciesproduction and antioxidant defense systems.

16.
Antioxidants (Basel) ; 8(9)2019 Sep 09.
Article in English | MEDLINE | ID: mdl-31505852

ABSTRACT

Reactive oxygen species (ROS) generation is a usual phenomenon in a plant both under a normal and stressed condition. However, under unfavorable or adverse conditions, ROS production exceeds the capacity of the antioxidant defense system. Both non-enzymatic and enzymatic components of the antioxidant defense system either detoxify or scavenge ROS and mitigate their deleterious effects. The Ascorbate-Glutathione (AsA-GSH) pathway, also known as Asada-Halliwell pathway comprises of AsA, GSH, and four enzymes viz. ascorbate peroxidase, monodehydroascorbate reductase, dehydroascorbate reductase, and glutathione reductase, play a vital role in detoxifying ROS. Apart from ROS detoxification, they also interact with other defense systems in plants and protect the plants from various abiotic stress-induced damages. Several plant studies revealed that the upregulation or overexpression of AsA-GSH pathway enzymes and the enhancement of the AsA and GSH levels conferred plants better tolerance to abiotic stresses by reducing the ROS. In this review, we summarize the recent progress of the research on AsA-GSH pathway in terms of oxidative stress tolerance in plants. We also focus on the defense mechanisms as well as molecular interactions.

17.
Antioxidants (Basel) ; 8(9)2019 Sep 01.
Article in English | MEDLINE | ID: mdl-31480540

ABSTRACT

Salinity toxicity and the post-stress restorative process were examined to identify the salt tolerance mechanism in tomato, with a focus on the antioxidant defense and glyoxalase systems. Hydroponically grown 15 day-old tomato plants (Solanum lycopersicum L. cv. Pusa Ruby) were treated with 150 and 250 mM NaCl for 4 days and subsequently grown in nutrient solution for a further 2 days to observe the post-stress responses. Under saline conditions, plants showed osmotic stress responses that included low leaf relative water content and high proline content. Salinity induced oxidative stress by the over-accumulation of reactive oxygen species (H2O2 and O2•-) and methylglyoxal. Salinity also impaired the non-enzymatic and enzymatic components of the antioxidant defense system. On the other hand, excessive Na+ uptake induced ionic stress which resulted in a lower content of other minerals (K+, Ca2+, and Mg2+), and a reduction in photosynthetic pigment synthesis and plant growth. After 2 days in the normal nutrient solution, the plants showed improvements in antioxidant and glyoxalase system activities, followed by improvements in plant growth, water balance, and chlorophyll synthesis. The antioxidant and glyoxalase systems worked in concert to scavenge toxic reactive oxygen species (ROS), thereby reducing lipid peroxidation and membrane damage. Taken together, these findings indicate that tomato plants can tolerate salinity and show rapid post-stress recovery by enhancement of their antioxidant defense and glyoxalase systems.

18.
Physiol Mol Biol Plants ; 25(4): 865-879, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31402814

ABSTRACT

Soil acidity causes proton (H+) rhizotoxicity, inhibits plant growth and development, and is a major yield-limiting factor for wheat production worldwide. Therefore, we investigated the physiological and biochemical responses of wheat (Triticum aestivum L.) to acidity stress in vitro. Five popular wheat cultivars developed by Bangladesh Agricultural Research Institute (BARI), namely, BARI Gom-21, BARI Gom-24, BARI Gom-25, BARI Gom-26, and BARI Gom-30, were studied in growing media under four different pH levels (3.5, 4.5, 5.5, and 6.5). We evaluated the cultivars based on their relative water content, proline (Pro) content, growth, biomass accumulation, oxidative damage, membrane stability, and mineral composition, as well as the performance of the antioxidant defense and glyoxalase systems. Although decrements of pH significantly reduced the tested morphophysiological and biochemical attributes in all the cultivars, there was high variability among the cultivars in response to the varying pH of the growing media. Acidity stress reduced growth, biomass, water content, and chlorophyll content in all the cultivars. However, BARI Gom-26 showed the least damage, with the lowest H2O2 generation, lipid peroxidation (MDA), and greater membrane stability, which indicate better tolerance against oxidative damage. In addition, the antioxidant defense components, ascorbate (AsA) and glutathione (GSH), and their redox balance were higher in this cultivar. Maximum H2O2 scavenging due to upregulation of the antioxidant enzymes [AsA peroxidase (APX), monodehydroascorbate reductase (MDHAR), dehydroascorbate reductase (DHAR), GSH reductase (GR), GSH peroxidase (GPX), and GSH-S-transferase (GST)] was observed in BARI Gom-26, which also illustrated significant enhancement of methylglyoxal (MG) detoxification by upregulating glyoxalase I (Gly I) and glyoxalase II (Gly II). This study also showed that balanced essential nutrient content as well as lower toxic micronutrient content was found in BARI Gom-26. Therefore, considering the physiological and biochemical attributes and growth, we conclude that BARI Gom-26 can withstand acidity stress during the early seedling stage, by regulating the coordinated action of the antioxidant defense and glyoxalase systems as well as maintaining nutrient balance.

19.
Plants (Basel) ; 8(8)2019 Jul 25.
Article in English | MEDLINE | ID: mdl-31349715

ABSTRACT

Quercetin (Qu) is a strong antioxidant among the phenolic compounds having physiological and biochemical roles in plants. Hence, we have studied the Qu evolved protection against salinity in tomato (Solanum lycopersicum L.). Salinity caused ionic toxicity by increasing Na+ content in seedlings along with nutritional starvation of K+, Ca2+, and Mg2+. While osmotic stress was detected by higher free proline (Pro) content and lower leaf relative water content (LRWC) in salt-stressed seedlings. Salt toxicity also induced higher H2O2 generation, malondialdehyde (MDA) content and lipoxygenase (LOX) activity as a sign of oxidative stress. Tomato seedlings suffered from methylglyoxal (MG) toxicity, degradation of chlorophyll, along with lower biomass accumulation and growth due to salt exposure. However, Qu application under salinity resulted in lower Na+/K+ due to reduced Na+ content, higher LRWC, increased Pro, and reduction of H2O2 and MDA content, and LOX activity, which indicated alleviation of ionic, osmotic, and oxidative stress respectively. Quercetin caused oxidative stress, lessening through the strengthening of both enzymatic and non-enzymatic antioxidants. In addition, Qu increased glutathione S-transferase activity in salt-invaded seedlings, which might be stimulated reactive oxygen species (ROS) scavenging along with higher GSH content. As a result, toxic MG was detoxified in Qu supplemented salt-stressed seedlings by increasing both Gly I and Gly II activities. Moreover, Qu insisted on better plant growth and photosynthetic pigments synthesis in saline or without saline media. Therefore, exogenous applied Qu may become an important actor to minimize salt-induced toxicity in crops.

20.
Int J Mol Sci ; 20(13)2019 Jun 30.
Article in English | MEDLINE | ID: mdl-31261998

ABSTRACT

Polyamines (PAs) are found in all living organisms and serve many vital physiological processes. In plants, PAs are ubiquitous in plant growth, physiology, reproduction, and yield. In the last decades, PAs have been studied widely for exploring their function in conferring abiotic stresses (salt, drought, and metal/metalloid toxicity) tolerance. The role of PAs in enhancing antioxidant defense mechanism and subsequent oxidative stress tolerance in plants is well-evident. However, the enzymatic regulation in PAs biosynthesis and metabolism is still under research and widely variable under various stresses and plant types. Recently, exogenous use of PAs, such as putrescine, spermidine, and spermine, was found to play a vital role in enhancing stress tolerance traits in plants. Polyamines also interact with other molecules like phytohormones, nitric oxides, trace elements, and other signaling molecules to providing coordinating actions towards stress tolerance. Due to the rapid industrialization metal/metalloid(s) contamination in the soil and subsequent uptake and toxicity in plants causes the most significant yield loss in cultivated plants, which also hamper food security. Finding the ways in enhancing tolerance and remediation mechanism is one of the critical tasks for plant biologists. In this review, we will focus the recent update on the roles of PAs in conferring metal/metalloid(s) tolerance in plants.


Subject(s)
Metalloids/toxicity , Metals/toxicity , Plants/metabolism , Polyamines/metabolism , Stress, Physiological , Environmental Pollution , Gene Expression Regulation, Plant , Metalloids/pharmacokinetics , Metals/pharmacokinetics , Plants/drug effects , Plants/genetics
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