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1.
Sci Rep ; 9(1): 14272, 2019 10 03.
Article in English | MEDLINE | ID: mdl-31582785

ABSTRACT

Corneal neo-vascularization (CNV) is a highly prevalent medical condition which impairs visual acuity. The role of specific proteins in modulating CNV has been extensively reported, although no studies have described the entire human proteome in CNV corneas. In this paper, we performed a proteomic analysis of vascularized vs healthy corneal stroma, in a CNV mouse model and in CNV-affected patients, with a specific focus on extracellular matrix (ECM) proteins. We identified and quantified 2315 murine proteins, 691 human proteins and validated 5 proteins which are differentially expressed in vascularized samples and conserved in mice and humans: tenascin-C and fibronectin-1 were upregulated, while decorin, lumican and collagen-VI were downregulated in CNV samples. Interestingly, among CNV patients, those affected with Acanthamoeba keratitis showed the highest levels of fibronectin-1 and tenascin-C, suggesting a specific role of these two proteins in Acanthamoeba driven corneal CNV. On a broader picture, our findings support the hypothesis that the corneal stroma in CNV samples is disorganized and less compact. We are confident that the dissection of the human corneal proteome may shed new light on the complex pathophysiology of human CNV, and finally lead to improved treatments.


Subject(s)
Corneal Neovascularization/metabolism , Extracellular Matrix Proteins/metabolism , Extracellular Matrix/metabolism , Protein Interaction Maps , Adult , Aged , Animals , Corneal Neovascularization/pathology , Extracellular Matrix/pathology , Extracellular Matrix Proteins/analysis , Female , Humans , Male , Mice , Mice, Inbred BALB C , Middle Aged , Proteomics
2.
Food Environ Virol ; 10(2): 222-223, 2018 06.
Article in English | MEDLINE | ID: mdl-29728976

ABSTRACT

The original version of this article unfortunately contained a mistake. The presentation of Table 1 was incorrect. The corrected table is given below. The original article has been corrected.

3.
Food Environ Virol ; 10(2): 141-150, 2018 06.
Article in English | MEDLINE | ID: mdl-29185203

ABSTRACT

Noroviruses (NoV) are a major cause of gastroenteritis worldwide. Recently, a novel variant of NoV GII.17 (GII.P17_GII.17 NoV), termed Kawasaki 2014, has been increasingly reported in NoV outbreaks in Asia, and has also been described in Europe and North America. In this study, sewage samples were investigated to study the occurrence and genetic diversity of NoV genogroup II (GII) along a 6-year period. Moreover, the spread of GII.17 strains (first appearance and occurrence along time) was specifically assessed. A total of 122 sewage samples collected from 2011 to 2016 from four wastewater treatment plants in Rome (Italy) were initially tested using real-time RT-(q)PCR for GII NoV. Positive samples were subsequently subjected to genotypic characterization by RT-nested PCRs using broad-range primes targeting the region C of the capsid gene of GII NoV, and specific primers targeting the same region of GII.17 NoV. In total, eight different genotypes were detected with the broad-range assay: GII.1 (n = 6), GII.2 (n = 8), GII.3 (n = 3), GII.4 (n = 13), GII.6 (n = 3), GII.7 (n = 2), GII.13 (n = 2), and GII.17 (n = 3), with the latter two genotypes detected only in 2016. Specific amplification of GII.17 NoV was successful in 14 out of 110 positive samples, spanned over the years 2013-2016. The amplicons of the broad-range PCR, pooled per year, were further analyzed by next-generation sequencing (NGS) for a deeper analysis of the genotypes circulating in the study period. NGS confirmed the circulation of GII.17 NoV since 2013 and detected, beyond the eight genotypes identified by Sanger sequencing, three additional genotypes regarded as globally uncommon: GII.5, GII.16, and GII.21. This study provides evidence that GII.17 NoV Kawasaki has been circulating in the Italian population before its appearance and identification in clinical cases, and has become a major genotype in 2016. Our results confirm the usefulness of wastewater surveillance coupled with NGS to study the molecular epidemiology of NoV and to monitor the emergence of NoV strains.


Subject(s)
Caliciviridae Infections/virology , Gastroenteritis/virology , Genetic Variation , Norovirus/genetics , Sewage/virology , Caliciviridae Infections/epidemiology , Gastroenteritis/epidemiology , Genotype , High-Throughput Nucleotide Sequencing , Humans , Molecular Epidemiology , Norovirus/isolation & purification , Sequence Analysis, DNA , Wastewater/virology
4.
Article in English | MEDLINE | ID: mdl-21698537

ABSTRACT

An increasing number of advanced therapy medicinal products (ATMPs) are under development and in clinical trials. Patients are central to this progress. In research, patients have funded, catalysed, coordinated and led projects. In regulation, patient groups have contributed to the creation of the political momentum for regulation of ATMPs, contributed to the debate and now participate in the regulatory process. Once licensed, patients will have a role in the pharmacovigilance, health technology assessment and reimbursement arrangements for these products. Patient groups contribute valuably as equal stakeholders at every step of the development of an ATMP.


Subject(s)
Patient Participation , Therapies, Investigational , Clinical Trials as Topic , Consumer Organizations , Europe , Genetic Therapy , Humans , Politics , Stem Cell Transplantation , Tissue Transplantation
5.
J Neurosci ; 20(2): 521-8, 2000 Jan 15.
Article in English | MEDLINE | ID: mdl-10632581

ABSTRACT

Rapsyn, a 43 kDa protein required to cluster nicotinic acetylcholine receptors (AChRs) at the neuromuscular junction, is tightly associated with the postsynaptic membrane via an N-terminal myristoylated site. Recent studies have shown that some acylated proteins associate with the exocytic pathway to become targeted to their correct destination. In this work, we used Torpedo electrocyte to investigate the intracellular routing of rapsyn compared to those of AChR and Na,K-ATPase, the respective components of the innervated and noninnervated membranes. We previously demonstrated that these latter two proteins are sorted and targeted to plasma membrane via distinct populations of post-Golgi vesicles (). Biochemical and immunoelectron microscopy analyses of various populations of post-Golgi vesicles immunopurified with magnetic beads led us to identify post-Golgi transport vesicles containing both rapsyn and AChR. These data suggest that rapsyn, as for AChR, specifically follows the exocytic pathway. Furthermore, immunogold-labeling experiments provided in situ evidence that AChR and rapsyn are cotransported in the same post-Golgi vesicles. Taken together, our observations suggest that rapsyn and AChR are cotargeted to the postsynaptic membrane.


Subject(s)
Electric Organ/physiology , Muscle Proteins/metabolism , Receptors, Nicotinic/metabolism , Animals , Blotting, Western , Cell Membrane/physiology , Cell Membrane/ultrastructure , Exocytosis , Microscopy, Immunoelectron , Muscle Proteins/analysis , Muscle Proteins/isolation & purification , Myristic Acid/metabolism , Organelles/physiology , Organelles/ultrastructure , Receptors, Nicotinic/analysis , Receptors, Nicotinic/isolation & purification , Synapses/physiology , Synapses/ultrastructure , Synaptic Membranes/physiology , Torpedo
6.
Mol Cell Neurosci ; 13(1): 69-78, 1999 Jan.
Article in English | MEDLINE | ID: mdl-10049532

ABSTRACT

Tyrosine phosphorylation is thought to play a critical role in the clustering of acetylcholine receptors (AChR) at the developing neuromuscular junction. Yet, in vitro approaches have led to conflicting conclusions regarding the function of tyrosine phosphorylation of AChR beta subunit in AChR clustering. In this work, we followed in situ the time course of tyrosine phosphorylation of AChR in developing Torpedo electrocyte. We observed that tyrosine phosphorylation of the AChR beta and delta subunits occurs at a late stage of embryonic development after the accumulation of AChRs and rapsyn in the membrane and the onset of innervation. Interestingly, in the mature postsynaptic membrane, we observed two populations of AChR differing both in their phosphotyrosine content and distribution. Our data are consistent with the notion that tyrosine phosphorylation of the AChR is related to downstream events in the pathway regulating AChR accumulation rather than to initial clustering events.


Subject(s)
Aging/metabolism , Electric Organ/embryology , Electric Organ/metabolism , Receptors, Nicotinic/metabolism , Tyrosine/metabolism , Animals , Blotting, Western , Electric Organ/cytology , Fluorescent Antibody Technique , Muscle Proteins/metabolism , Phosphorylation , Phosphotyrosine/metabolism , Subcellular Fractions/metabolism , Tissue Distribution , Torpedo/embryology , Torpedo/growth & development , Torpedo/metabolism
7.
J Physiol Paris ; 92(3-4): 177-81, 1998.
Article in English | MEDLINE | ID: mdl-9789804

ABSTRACT

In this study we have investigated the intracellular routing of two major components of the postsynaptic membrane in Torpedo electrocytes, the nicotinic acetylcholine receptor and the extrinsic 43 kDa protein rapsyn, and of a protein from the non-innervated membrane, the Na+,K+ ATPase. We isolated subpopulations of post-Golgi vesicles (PGVs) enriched either in AChR or in Na+,K+ ATPase. Rapsyn was associated to AChR-containing PGVs suggesting that both AChR and rapsyn are targeted to intracellular organelles in the secretory pathway before delivery to the postsynaptic membrane. In vitro assays further show that rapsyn-containing PVGs do bind more efficiently to microtubules compared to Na+,K+ ATPase-enriched PVGs. These data provide evidence in favor of the contribution of the secretory pathway to the delivery of synaptic components.


Subject(s)
Electric Organ/chemistry , Muscle Proteins/analysis , Receptors, Cholinergic/analysis , Receptors, Nicotinic/analysis , Synaptic Membranes/chemistry , Torpedo/metabolism , Animals , Electric Organ/cytology , Electric Organ/innervation , Molecular Weight , Sodium-Potassium-Exchanging ATPase/metabolism , Torpedo/anatomy & histology
8.
J Neurochem ; 69(4): 1374-81, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9326265

ABSTRACT

N18TG2 neuroblastoma clone is defective for biosynthetic neurotransmitter enzymes; its inability to establish functional synapses is overcome in the neuroblastoma x glioma 108CC15, where acetylcholine synthesis is also activated. These observations suggest a possible relation between the ability to produce acetylcholine and the capability to advance in the differentiation program and achieve a fully differentiated state. Here, we report the characterization of several clones after transfection of N18TG2 cells with a construct containing a cDNA for rat choline acetyltransferase (ChAT). The ability of these clones to synthesize acetylcholine is demonstrated by HPLC determination on cellular extracts. In the transfected clones, northern blot analysis shows increased expression of mRNAs for a specific neuronal protein associated with synaptic vesicles, synapsin I. Fiber outgrowth of transfected clones is also evaluated to establish whether there is any relation between ChAT levels and morphological differentiation. This analysis shows that the transfected clone 1/2, not expressing ChAT activity, displays a very immature morphology, and its ability to extend fibers also remains rather poor in the presence of "differentiation" agents such as retinoic acid. In contrast, clones 2/4, 3/1, and 3/2, exhibiting high ChAT levels, display higher fiber outgrowth compared with clone 1/2 in both the absence and the presence of differentiating agents.


Subject(s)
Acetylcholine/metabolism , Neurons/metabolism , Neurons/pathology , Animals , Cell Differentiation , Choline O-Acetyltransferase/genetics , DNA, Complementary/genetics , Gene Expression , Hybrid Cells/metabolism , Mice , Nerve Fibers/physiology , Neurons/physiology , RNA, Messenger/metabolism , Rats , Synapsins/genetics , Transfection , Tumor Cells, Cultured
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