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Bioorg Med Chem Lett ; 10(13): 1417-20, 2000 Jul 03.
Article in English | MEDLINE | ID: mdl-10888322

ABSTRACT

The contribution of amino acid side chains to the recognition of DNA by peptides or proteins is evaluated by substituting single nucleobases of a DNA double strand by amino acid side chains. C-nucleosides with the side chains of phenylalanine and asparagine were synthesized and incorporated in DNA. This modification should allow to keep the double strand conformation. Hydrogen bonds, pi-pi-interactions and solvation have an influence on the double strand stability.


Subject(s)
Asparagine/analogs & derivatives , Asparagine/chemical synthesis , DNA/chemistry , Nucleosides/chemistry , Phenylalanine/analogs & derivatives , Phenylalanine/chemical synthesis , Base Pair Mismatch , Hydrogen Bonding , Molecular Structure , Nucleic Acid Conformation , Peptide Nucleic Acids/chemistry
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