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1.
J Chem Phys ; 156(5): 054701, 2022 Feb 07.
Article in English | MEDLINE | ID: mdl-35135251

ABSTRACT

By extending the theoretical framework derived in our previous study [Imaizumi et al., J. Chem. Phys. 153, 034701 (2020)], we successfully calculated the solid-liquid (SL) and solid-vapor (SV) interfacial tensions of a simple Lennard-Jones fluid around solid cylinders with nanometer-scale diameters from single equilibrium molecular dynamics systems in which a solid cylinder was vertically immersed into a liquid pool. The SL and SV interfacial tensions γSL - γS0 and γSV - γS0 relative to that for bare solid surface γS0, respectively, were obtained by simple force balance relations on fluid-containing control volumes set around the bottom and top ends of the solid cylinder, which are subject to the fluid stress and the force from the solid. The theoretical contact angle calculated by Young's equation using these interfacial tensions agreed well with the apparent contact angle estimated by the analytical solution to fit the meniscus shape, showing that Young's equation holds even for the menisci around solids with nanoscale curvature. We have also found that the curvature effect on the contact angle was surprisingly small while it was indeed large on the local forces exerted on the solid cylinder near the contact line. In addition, the present results showed that the curvature dependence of the SL and SV interfacial free energies, which are the interfacial tensions, is different from that of the corresponding interfacial potential energies.

2.
Nanoscale ; 14(6): 2446-2455, 2022 Feb 10.
Article in English | MEDLINE | ID: mdl-35098963

ABSTRACT

Nanobubbles at solid-liquid interfaces play a key role in various physicochemical phenomena and it is crucial to understand their unique properties. However, little is known about their interfacial tensions due to the lack of reliable calculation methods. Based on mechanical and thermodynamic insights, we quantified for the first time the liquid-gas, solid-liquid, and solid-gas interfacial tensions of submicron-sized nitrogen bubbles at graphite-water interfaces using molecular dynamics (MD) analysis. It was revealed that Young's equation holds even for nanobubbles with different radii. We found that the liquid-gas and solid-liquid interfacial tensions were not largely affected by the gas density inside the nanobubbles. In contrast, the size effect on the solid-gas interfacial tension was observed, namely, the value dramatically decreased upon an increase in the gas density due to gas adsorption on the solid surface. However, our quantitative evaluation also revealed that the gas density effect on the contact angles is negligible when the footprint radius is larger than 50 nm, which is a typical range observed in experiments, and thus the flat shape and stabilization of submicron-sized surface bubbles observed in experiments cannot be explained only by the changes in interfacial tensions due to the van der Waals interaction-induced gas adsorption, namely by Young's equation without introducing the pinning effect. Based on our analysis, it was clarified that additional factors such as the differences in the studied systems are needed to explain the unresolved open issues - a satisfactory explanation for the nanobubbles in MD simulations being ultradense, non-flat, and stable without pinning.

3.
J Chem Phys ; 155(6): 064703, 2021 Aug 14.
Article in English | MEDLINE | ID: mdl-34391348

ABSTRACT

In the last few years, much attention has been devoted to the control of the wettability properties of surfaces modified with functional groups. Molecular dynamics (MD) simulation is one of the powerful tools for microscopic analysis providing visual images and mean geometrical shapes of the contact line, e.g., of nanoscale droplets on solid surfaces, while profound understanding of wetting demands quantitative evaluation of the solid-liquid (SL) interfacial tension. In the present work, we examined the wetting of water on neutral and regular hydroxylated silica surfaces with five different area densities of OH groups ρA OH, ranging from a non-hydroxylated surface to a fully hydroxylated one through two theoretical methods: thermodynamic integration (TI) and MD simulations of quasi-two-dimensional equilibrium droplets. For the former, the work of adhesion needed to quasi-statically strip the water film off the solid surface was computed by the phantom wall TI scheme to evaluate the SL interfacial free energy, whereas for the latter, the apparent contact angle θapp was calculated from the droplet density distribution. The theoretical contact angle θYD and the apparent one θapp, both indicating the enhancement of wettability by an increase in ρA OH, presented good quantitative agreement, especially for non-hydroxylated and highly hydroxylated surfaces. On partially hydroxylated surfaces, in which θYD and θapp slightly deviated, the Brownian motion of the droplet was suppressed, possibly due to the pinning of the contact line around the hydroxyl groups. Relations between work of adhesion, interfacial energy, and entropy loss were also analyzed, and their influence on the wettability was discussed.

4.
J Chem Phys ; 153(3): 034701, 2020 Jul 21.
Article in English | MEDLINE | ID: mdl-32716183

ABSTRACT

We have given theoretical expressions for the forces exerted on a so-called Wilhelmy plate, which we modeled as a quasi-2D flat and smooth solid plate immersed in a liquid pool of a simple liquid. All forces given by the theory, the local forces on the top, the contact line, and the bottom of the plate as well as the total force, showed an excellent agreement with the MD simulation results. The force expressions were derived by a purely mechanical approach, which is exact and ensures the force balance on the control volumes arbitrarily set in the system, and are valid as long as the solid-liquid (SL) and solid-vapor (SV) interactions can be described by mean-fields. In addition, we revealed that the local forces around the bottom and top of the solid plate can be related to the SL and SV interfacial tensions γSL and γSV, and this was verified through the comparison with the SL and SV works of adhesion obtained by the thermodynamic integration (TI). From these results, it has been confirmed that γSL and γSV as well as the liquid-vapor interfacial tension γLV can be extracted from a single equilibrium MD simulation without the computationally demanding calculation of the local stress distributions and the TI.

5.
J Chem Theory Comput ; 15(8): 4615-4622, 2019 Aug 13.
Article in English | MEDLINE | ID: mdl-31188595

ABSTRACT

We have developed a method that allows computing the vibrational spectra at a high quantum mechanical level for molecules in solution or other complex systems. The method is based on the use of configurational samplings from combined QM/MM molecular dynamics simulations and the use of perturbation theory to calculate accurate molecular properties. Such calculations provide in addition accurate free energy gradient vectors and Hessian matrices and thus open the door for the characterization of stationary points in free energy landscapes and the study of chemical reaction mechanisms in large disordered systems. The vibrational spectrum of the water molecule in liquid water has been computed as a test case. It has been obtained using a weighted average of instantaneous signals assuming the instantaneous normal modes approach. Vibrational frequencies are also computed by diagonalizing the Hessian of the free energy surface. Comparison is made with experimental data and with calculations using the Fourier transform of the time autocorrelation function of the dipole moment. The discussion emphasizes the advantages of the developed methodology compared to other techniques in terms of the accuracy/computational cost ratio.

6.
J Phys Chem B ; 122(39): 9202-9209, 2018 10 04.
Article in English | MEDLINE | ID: mdl-30160963

ABSTRACT

A theoretical study of the solvatochromic shifts of para-nitrophenol ( pNP) and para-nitrophenolate anion ( pNP-) in aqueous solution is presented using a QM/MM methodology with molecular dynamics simulation. The optimized structures in aqueous solution are obtained using both the polarizable continuum and the free-energy gradient methods. For pNP, the calculated redshifts at the CASPT2 (12,10) level are, respectively, 0.71 and 0.94 eV, in good agreement with the experimental ones (0.80-0.83 eV), whereas for pNP-, they are small. The difference between the solvatochromic shifts of pNP and pNP- is calculated as 0.71 eV in good agreement with the experimental one (0.79-0.81 eV). Finally, these shifts are understood in terms of the solvent effect on the solute structure, accurately calculated by the present theoretical treatment.

7.
J Chem Theory Comput ; 14(6): 3262-3271, 2018 Jun 12.
Article in English | MEDLINE | ID: mdl-29741887

ABSTRACT

We describe a method to locate stationary points in the free-energy hypersurface of complex molecular systems using high-level correlated ab initio potentials. In this work, we assume a combined QM/MM description of the system although generalization to full ab initio potentials or other theoretical schemes is straightforward. The free-energy gradient (FEG) is obtained as the mean force acting on relevant nuclei using a dual level strategy. First, a statistical simulation is carried out using an appropriate, low-level quantum mechanical force-field. Free-energy perturbation (FEP) theory is then used to obtain the free-energy derivatives for the target, high-level quantum mechanical force-field. We show that this composite FEG-FEP approach is able to reproduce the results of a standard free-energy minimization procedure with high accuracy, while simultaneously allowing for a drastic reduction of both computational and wall-clock time. The method has been applied to study the structure of the water molecule in liquid water at the QCISD/aug-cc-pVTZ level of theory, using the sampling from QM/MM molecular dynamics simulations at the B3LYP/6-311+G(d,p) level. The obtained values for the geometrical parameters and for the dipole moment of the water molecule are within the experimental error, and they also display an excellent agreement when compared to other theoretical estimations. The developed methodology represents therefore an important step toward the accurate determination of the mechanism, kinetics, and thermodynamic properties of processes in solution, in enzymes, and in other disordered chemical systems using state-of-the-art ab initio potentials.

8.
J Phys Chem A ; 119(21): 5099-106, 2015 May 28.
Article in English | MEDLINE | ID: mdl-25424499

ABSTRACT

The vibrational circular dichroism (VCD) spectrum of l-alanine amino acid in aqueous solution in ambient conditions has been studied. The emphasis has been placed on the inclusion of the thermal disorder of the solute-solvent hydrogen bonds that characterize the aqueous solution condition. A combined and sequential use of molecular mechanics and quantum mechanics was adopted. To calculate the average VCD spectrum, the DFT B3LYP/6-311++G(d,p) level of calculation was employed, over one-hundred configurations composed of the solute plus all water molecules making hydrogen bonds with the solute. Simplified considerations including only four explicit solvent molecules and the polarizable continuum model were also made for comparison. Considering the large number of vibration frequencies with only limited experimental results a direct comparison is presented, when possible, and in addition a statistical analysis of the calculated values was performed. The results are found to be in line with the experiment, leading to the conclusion that including thermal disorder may improve the agreement of the vibrational frequencies with experimental results, but the thermal effects may be of greater value in the calculations of the rotational strengths.


Subject(s)
Alanine/chemistry , Circular Dichroism , Thermodynamics , Water/chemistry , Circular Dichroism/methods , Hydrogen Bonding , Models, Molecular , Quantum Theory , Solvents/chemistry , Vibration
9.
J Phys Chem A ; 117(21): 4404-11, 2013 May 30.
Article in English | MEDLINE | ID: mdl-23646994

ABSTRACT

The flavonoids have been the target of several experimental works due to its influence in the human health as antioxidant elements. The fluorescence properties of these compounds have been widely studied due to the large Stokes shifts experimentally observed and the variety of processes that lead to the fluorescence. In the present work the role of the solvent in the large Stokes shift experimentally observed in the daidzein molecular system in water is theoretically studied. Also studied is the nonfluorescent decay mechanism in a polar aprotic solvent like acetonitrile. The solvent effect in the ground and in the low-lying excited electronic states is taken into account by using the sequential-QM/MM methodology. Excited state properties like equilibrium geometries and transition energies were studied by using multiconfigurational calculations, CASSCF and CASPT2. The excited electronic state responsible for the fluorescence spectrum in water was identified, and the large Stokes shift seems to be the result of the large interaction of the system in this electronic state with the solvent. On the other hand, spin-orbit coupling calculations, between the singlet and triplet electronic states, indicate favorable conditions for intersystem crossing, in agreement with the experimental result of nonfluorescence observation.


Subject(s)
Isoflavones/chemistry , Fluorescence , Molecular Structure , Quantum Theory , Solvents/chemistry , Water/chemistry
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