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2.
Cytogenet Genome Res ; 124(2): 113-20, 2009.
Article in English | MEDLINE | ID: mdl-19420922

ABSTRACT

Hemizygous deletions of the chromosome 22q11.2 region result in the 22q11.2 deletion syndrome also referred to as DiGeorge, Velocardiofacial or Shprintzen syndromes. The phenotype is variable but commonly includes conotruncal cardiac defects, palatal abnormalities, learning and behavioral problems, immune deficiency, and facial anomalies. Four distinct highly homologous blocks of low copy number repeat sequences (LCRs) flank the deletion region. Mispairing of LCRs during meiosis with unequal meiotic exchange is assumed to cause the recurrent and consistent deletions. The proximal LCR is reportedly located at 22q11.2 from 17.037 to 17.083 Mb while the distal LCR is located from 19.835 to 19.880 Mb. Although the chromosome breakpoints are thought to localize to the LCRs, the positions of the breakpoints have been investigated in only a few individuals. Therefore, we used high resolution oligonucleotide-based 244K microarray comparative genomic hybridization (aCGH) to resolve the breakpoints in a cohort of 20 subjects with known 22q11.2 deletions. We also investigated copy number variation (CNV) in the rest of the genome. The 22q11.2 breaks occurred on either side of the LCR in our subjects, although more commonly on the distal side of the reported proximal LCR. The proximal breakpoints in our subjects spanned the region from 17.036 to 17.398 Mb. This region includes the genes DGCR6 (DiGeorge syndrome critical region protein 6) and PRODH (proline dehydrogenase 1), along with three open reading frames that may encode proteins of unknown function. The distal breakpoints spanned the region from 19.788 to 20.122 Mb. This region includes the genes GGT2 (gamma-glutamyltransferase-like protein 2), HIC2 (hypermethylated in cancer 2), and multiple transcripts of unknown function. The genes in these two breakpoint regions are variably hemizygous depending on the location of the breakpoints. Our 20 subjects had 254 CNVs throughout the genome, 94 duplications and 160 deletions, ranging in size from 1 kb to 2.4 Mb. The presence or absence of genes at the breakpoints depending on the size of the deletion plus variation in the rest of the genome due to CNVs likely contribute to the variable phenotype associated with the 22q11.2 deletion or DiGeorge syndrome.


Subject(s)
Chromosome Breakage , Chromosome Deletion , Chromosomes, Human, Pair 22/genetics , Comparative Genomic Hybridization , DiGeorge Syndrome/genetics , Gene Dosage , Humans , RNA, Messenger/genetics , RNA, Messenger/metabolism
3.
Int J Obes (Lond) ; 33(2): 273-83, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19048015

ABSTRACT

BACKGROUND: Differences in behavioral phenotypes between the two most common subtypes of Prader-Willi syndrome (PWS) (chromosome 15q deletions and maternal uniparental disomy 15 (UPD) indicate that distinct neural networks may be affected. Though both subtypes display hyperphagia, the deletion subgroup shows reduced behavioral inhibition around food, whereas those with UPD are generally more able to maintain cognitive control over food intake impulses. OBJECTIVE: To examine the neural basis of phenotypic differences to better understand relationships between genetic subtypes and behavioral outcomes. We predicted greater food motivation circuitry activity in the deletion subtype and greater activity in higher order cognitive regions in the UPD group, especially after eating. DESIGN AND PARTICIPANTS: Nine individuals with PWS due to UPD and nine individuals with PWS due to (type 2) deletion, matched for age, gender and body mass index, underwent functional magnetic resonance imaging (fMRI) while viewing food images during two food motivation states: one before (pre-meal) and one after (post-meal) eating a standardized 500 kcal meal. RESULTS: Both PWS subgroups showed greater activity in response to food pre- and post-meal compared with the healthy-weight group. Compared with UPD, the deletion subtype showed increased food motivation network activation both pre- and post-meal, especially in the medial prefrontal cortex (mPFC) and amygdala. In contrast, the UPD group showed greater activation than the deletion subtype post-meal in the dorsolateral prefrontal cortex (DLPFC) and parahippocampal gyrus (PHG). CONCLUSION: These preliminary findings are the first functional neuroimaging findings to support divergent neural mechanisms associated with behavioral phenotypes in genetic subtypes of PWS. Results are discussed within the framework of genetic mechanisms such as haploinsufficiency and gene dosage effects and their differential influence on deletion and UPD subtypes, respectively.


Subject(s)
Appetite/physiology , Brain/physiopathology , Hyperphagia/physiopathology , Prader-Willi Syndrome/physiopathology , Appetite/genetics , Chromosome Deletion , Chromosomes, Human, Pair 15/genetics , Female , Humans , Hyperphagia/genetics , Hyperphagia/psychology , Magnetic Resonance Imaging , Male , Nerve Net , Phenotype , Photic Stimulation , Prader-Willi Syndrome/genetics , Prader-Willi Syndrome/psychology , Surveys and Questionnaires , Uniparental Disomy/genetics , Young Adult
4.
Am J Med Genet A ; 146A(18): 2346-54, 2008 Sep 15.
Article in English | MEDLINE | ID: mdl-18698613

ABSTRACT

We previously developed a novel quantitative microsphere suspension hybridization (QMH) assay for high-throughput determination of genomic copy number by direct hybridization of unique sequence probes to genomic DNA followed by flow cytometric analysis. Herein, we describe the first clinical application of this assay examining the Prader-Willi syndrome (PWS) chromosome region at 15q11-13. We designed 30 unique sequence test probes (approximately 60 nucleotides each) spanning 11.37 Mb of chromosome 15q11.2-q13.3 and a disomic reference probe (Actin Beta, chromosome 7p22.1), conjugated to spectrally distinct polystyrene microsphere levels. All probes were hybridized to biotin-labeled genomic DNA in multiplex QMH reactions, and hybridization was detected using phycoerythrin-labeled streptavidin and analyzed by dual-laser flow cytometry. Copy number differences were distinguished by comparing mean fluorescence intensities (MFI) of the test probes to the reference probe in 20 individuals with PWS and six controls. The mean MFI ratio for deleted loci was 0.56 +/- 0.09 (n = 88) as compared to the MFI ratios for normal loci, 0.96 +/- 0.06 (n = 236), and duplicated loci, 1.44 +/- 0.10 (n = 22). A multiplex QMH assay could readily distinguish type I from type II deletions in PWS subjects, as well as small (approximately 4.3 kb) imprinting center (IC) deletions, with no overlap in MFI values compared with normal loci. Using this diagnostic QMH assay, the precise deleted genomic interval could be ascertained in all PWS subjects examined in the present study.


Subject(s)
Chromosome Deletion , Chromosome Mapping , Chromosomes, Human, Pair 15 , Nucleic Acid Hybridization/methods , Prader-Willi Syndrome/genetics , DNA Probes , Gene Dosage , Humans , Microspheres , Sensitivity and Specificity
5.
J Med Genet ; 45(5): 309-13, 2008 May.
Article in English | MEDLINE | ID: mdl-18156436

ABSTRACT

BACKGROUND: X-chromosome inactivation (XCI) is the mechanism by which gene dosage uniformity is achieved between female mammals with two X chromosomes and male mammals with a single X chromosome, and is thought to occur randomly. For molecular genetic testing, accessible tissues (eg blood) are commonly studied, but the relationship with inaccessible tissues (eg brain) is poorly understood. For accessible tissues to be informative for genetic analysis, a high degree of concordance of genetic findings among tissue types is required. OBJECTIVE: To determine the relationship among multiple tissues within females at different ages (fetus to 82 years). METHODS: XCI patterns were analysed using the polymorphic androgen receptor (AR) gene assay. DNA was isolated from 26 different human females without history of malignancy, using 34 autopsy tissues representing the three embryonic germ layers. RESULTS: 33 of the 280 tissue samples analysed from 13 of the 26 females showed skewed XCI values (>80:20%). Average XCI value was not significantly different among the tissues, but a trend for increasing XCI variability was observed with age in blood and other tissues studied (eg the SD for all tissues studied for the 0-2 years group was 9.9% compared with 14.8% in the >60 years group). We found a significant correlation (r(s) = 0.51, p = 0.035) between XCI values for blood and/or spleen and brain tissue, and in most other tissues representing the three embryonic germ layers. CONCLUSIONS: In our study, XCI data were comparable among accessible (eg blood) and inaccessible tissues (eg brain) in females at various ages, and may be useful for genetic testing. A trend was seen for greater XCI variability with increasing age, particularly in older women (>60 years).


Subject(s)
X Chromosome Inactivation , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Dosage Compensation, Genetic , Female , Fetus/metabolism , Humans , Infant , Infant, Newborn , Middle Aged , Pregnancy , Receptors, Androgen/metabolism
6.
J Med Genet ; 43(5): e21, 2006 May.
Article in English | MEDLINE | ID: mdl-16648374

ABSTRACT

OBJECTIVE: To screen cDNA for NLGN3 and NLGN4 from lymphoblastoid cells from autistic subjects. METHODS AND RESULTS: 10 young autistic females and 30 non-autistic subjects were studied for alterations in two X linked genes, NLGN3 and NLGN4. A novel NLGN4 isoform lacking exon 4, which occurred de novo on the paternal allele, was identified in one of the autistic females. Monoallelic expression of NLGN4 was seen in this subject and in 11 of 14 informative autistic and non-autistic females using a single nucleotide polymorphism found at 3' UTR. Additionally, the NLGN3 transcript was present in two isoforms (with and without exon 7) in nine of 10 autistic females and in 30 non-autistic subjects, including parents of the autistic female having only the complete transcript with exon 7, and from the whole brain of a control. The novel truncated NLGN3 product may have a regulatory role, as reported in other proteins (for example, vasopressin receptor) by attenuating the function of the full length isoform, resulting in a reduction of the mature protein. Three dimensional protein structures were characterised using comparative modelling, and significant changes were suggested in the protein cores for these two neuroligin isoforms. CONCLUSIONS: Splice variants may lead to potentially abnormal neuroligins in the causation of autism spectrum disorders.


Subject(s)
Autistic Disorder/genetics , Carrier Proteins/genetics , Membrane Proteins/genetics , Nerve Tissue Proteins/genetics , RNA Splicing/genetics , Alleles , Amino Acid Sequence , Autistic Disorder/diagnosis , Autistic Disorder/metabolism , Carrier Proteins/chemistry , Carrier Proteins/physiology , Cell Adhesion Molecules, Neuronal , Cell Line , DNA Mutational Analysis , Exons , Female , Genetic Testing , Genetic Variation , Humans , Male , Membrane Proteins/chemistry , Membrane Proteins/physiology , Models, Molecular , Molecular Sequence Data , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/physiology , Pedigree , Protein Isoforms/genetics , Protein Structure, Tertiary , Sequence Alignment , Sequence Deletion
7.
Int J Obes (Lond) ; 30(2): 382-7, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16231029

ABSTRACT

BACKGROUND: People with obesity and/or the metabolic syndrome have an increased risk for developing diabetes and cardiovascular disease and may have low adiponectin levels. The obesity associated with Prader-Willi syndrome (PWS) would be expected to have similar complications. However, it was recently reported that, despite their adiposity, people with PWS have reduced visceral fat and are less likely to develop diabetes mellitus or the metabolic syndrome compared with people with simple obesity. OBJECTIVE: To determine if plasma adiponectin levels and other variables relevant to diabetes and cardiovascular risk are different in a cohort of PWS subjects with known genetic subtypes compared with age-, sex- and weight-matched control subjects. RESULTS: Fasting plasma glucose, C-peptide, triglycerides, leptin and cholesterol levels were similar in PWS and obese subjects. Our 20 PWS subjects (mean age = 27.7 years) had higher percent body fat (54.1 vs 48.5%) determined by DEXA measurements and lower percent lean mass (45.9 vs 51.5%) compared with 14 obese controls (mean age = 26.9 year). Plasma adiponectin levels were significantly higher in PWS (15.5 +/- 8.2 microg/ml) than in obese controls (7.5 +/- 2.7 microg/ml). A significant positive correlation was found with insulin sensitivity in PWS subjects (r = 0.75, P = 0.0003) but not in obese controls (r = 0.36, P = 0.20). DISCUSSION: Our study confirmed an earlier observation of higher adiponectin levels in PWS subjects and less insulin resistance proportionate to their obesity status than found in subjects with simple obesity. Furthermore, no differences were seen in PWS subjects with the chromosome 15 deletion or maternal disomy 15. The reported excessive visceral adiposity in subjects with simple obesity compared with PWS may be associated with decreased production and lower circulating levels of adiponectin.


Subject(s)
Adiponectin/blood , Body Composition , Insulin Resistance , Obesity/blood , Prader-Willi Syndrome/blood , Adolescent , Adult , Biomarkers/blood , Blood Glucose/analysis , Body Fat Distribution , C-Peptide/blood , Humans , Insulin/blood , Leptin/blood , Statistics, Nonparametric , Triglycerides/blood
8.
J Autism Dev Disord ; 35(5): 675-81, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16167093

ABSTRACT

Autism is a heterogeneous neurodevelopmental disorder with a 3-4 times higher sex ratio in males than females. X chromosome genes may contribute to this higher sex ratio through unusual skewing of X chromosome inactivation. We studied X chromosome skewness in 30 females with classical autism and 35 similarly aged unaffected female siblings as controls using the polymorphic androgen receptor (AR) gene. Significantly, increased X chromosome skewness (e.g., >80:20%) was detected in our autism group (33%) compared to unaffected females (11%). X chromosome skewness was also seen in 50% of the mothers with autistic daughters. No mutation was seen in the promoter region of the XIST gene reported to be involved in X chromosome inactivation in our subjects. X chromosome skewness has been reported in female carriers of other neurological disorders such as X-linked mental retardation, adrenoleukodystrophy and Rett syndrome.


Subject(s)
Autistic Disorder/genetics , Chromosomes, Human, X/genetics , X Chromosome Inactivation/genetics , Child , Child, Preschool , DNA Mutational Analysis , Female , Humans , Point Mutation/genetics , Promoter Regions, Genetic/genetics , RNA, Long Noncoding , RNA, Untranslated/genetics
9.
J Med Genet ; 40(8): 568-74, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12920063

ABSTRACT

BACKGROUND: Prader-Willi syndrome (PWS), the most common genetic cause of marked obesity, is caused by genomic imprinting and loss of expression of paternal genes in the 15q11-q13 region. There is a paucity of data examining simultaneous gene expression in this syndrome. METHODS: We generated cDNA microarrays representing 73 non-redundant genes/transcripts from the 15q11-q13 region, the majority within the PWS critical region and others distally on chromosome 15. We used our custom microarrays to compare gene expression from actively growing lymphoblastoid cell lines established from nine young adult males (six with PWS (three with deletion and three with UPD) and three controls). RESULTS: There was no evidence of expression of genes previously identified as paternally expressed in the PWS cell lines with either deletion or UPD. We detected no difference in expression of genes with known biallelic expression located outside the 15q11-q13 region in all cell lines studied. There was no difference in expression levels of biallelically expressed genes (for example, OCA2) from within 15q11-q13 when comparing UPD cell lines with controls. However, two genes previously identified as maternally expressed (UBE3A and ATP10C) showed a significant increase in expression in UPD cell lines compared with control and PWS deletion subjects. Several genes/transcripts (for example, GABRA5, GABRB3) had increased expression in UPD cell lines compared with deletion, but less than controls indicating paternal bias. CONCLUSIONS: Our results suggest that differences in expression of candidate genes may contribute to phenotypic differences between PWS subjects with deletion or UPD and warrant further investigations.


Subject(s)
Gene Deletion , Gene Expression Profiling/methods , Oligonucleotide Array Sequence Analysis/methods , Prader-Willi Syndrome/genetics , Uniparental Disomy/genetics , Adult , Cell Line , Chromosomes, Human, Pair 15/genetics , Genomic Imprinting/genetics , Humans , Male , Prader-Willi Syndrome/pathology , Reverse Transcriptase Polymerase Chain Reaction
12.
J Biol Chem ; 275(47): 37194-201, 2000 Nov 24.
Article in English | MEDLINE | ID: mdl-10958790

ABSTRACT

Metal response element-binding transcription factor-1 (MTF-1) is a unique, zinc-inducible transcription factor that binds to metal response elements in the metallothionein promoter and activates transcription in response to metals and oxidative stress. MTF-1 contains six zinc fingers of the Cys(2)-His(2) type. It was previously shown that MTF-1 is reversibly activated to bind DNA in response to changes in zinc status, unlike other zinc finger transcription factors, which do not appear to be reversibly activated by zinc in the cellular environment. Here we show that zinc fingers 2-4 constitute the core DNA-binding domain, whereas fingers 5 and 6 appear to be unnecessary for DNA binding in vitro. Deletion of finger 1 resulted in a protein that bound DNA constitutively in vitro. Furthermore, transfer of MTF-1 finger 1 to a position immediately preceding the three zinc fingers of Sp1 resulted in a chimeric protein that required exogenous zinc to activate DNA binding in vitro, unlike native Sp1, which binds DNA constitutively. Transient transfection experiments demonstrated that intact MTF-1 activated a reporter 2.5-4-fold above basal levels after metal treatment in mouse MTF-1 knockout cells, Drosophila SL2 cells, and yeast. However, the metal response was lost in all three systems when finger 1 was deleted, but was unaffected by deletion of fingers 5 and 6. These data suggest that finger 1 of MTF-1 constitutes a unique metal-sensing domain that, in cooperation with the transactivation domains, produces a zinc-sensing metalloregulatory transcription factor.


Subject(s)
DNA/metabolism , Transcription Factors/chemistry , Zinc Fingers , Animals , Binding Sites , Cells, Cultured , DNA-Binding Proteins , Drosophila , Metallothionein/genetics , Mice , Oxidative Stress , Promoter Regions, Genetic , Recombinant Fusion Proteins/metabolism , Saccharomyces cerevisiae , Sp1 Transcription Factor/metabolism , Structure-Activity Relationship , Transcriptional Activation , Transcription Factor MTF-1
13.
J Biol Chem ; 275(13): 9377-84, 2000 Mar 31.
Article in English | MEDLINE | ID: mdl-10734081

ABSTRACT

Metal response element-binding transcription factor-1 (MTF-1) is a six-zinc finger protein that plays an essential role in activating metallothionein expression in response to the heavy metals zinc and cadmium. Low affinity interactions between zinc and specific zinc fingers in MTF-1 reversibly regulate its binding to the metal response elements in the mouse metallothionein-I promoter. This study examined the subcellular distribution and DNA binding activity of MTF-1 in cells treated with zinc or cadmium. Immunoblot analysis of cytosolic and nuclear extracts demonstrated that in untreated cells, about 83% of MTF-1 is found in the cytosolic extracts and is not activated to bind to DNA. In sharp contrast, within 30 min of zinc treatment (100 microM), MTF-1 is detected only in nuclear extracts and is activated to bind to DNA. The activation to bind to DNA and nuclear translocation of MTF-1 occurs in the absence of increased MTF-1 content in the cell. Furthermore, immunocytochemical localization and immunoblotting assays demonstrated that zinc induces the nuclear translocation of MTF-1-FLAG, expressed from the cytomegalovirus promoter in transiently transfected dko7 (MTF-1 double knockout) cells. Immunoblot analysis of cytosolic and nuclear extracts from cadmium-treated cells demonstrated that concentrations of cadmium (10 microM) that actively induce metallothionein gene expression cause only a small increase in the amount of nuclear MTF-1. In contrast, an overtly toxic concentration of cadmium (50 microM) rapidly induced the complete nuclear translocation and activation of DNA binding activity of MTF-1. These studies are consistent with the hypothesis that MTF-1 serves as a zinc sensor that responds to changes in cytosolic free zinc concentrations. In addition, these data suggest that cadmium activation of metallothionein gene expression may be accompanied by only small changes in nuclear MTF-1.


Subject(s)
Cadmium/metabolism , Cell Nucleus/metabolism , Transcription Factors/metabolism , Zinc/metabolism , Animals , Antibody Specificity , Biological Transport , Cells, Cultured , Cytosol/metabolism , DNA-Binding Proteins/metabolism , Immune Sera , Immunohistochemistry , Mice , Transcription Factors/immunology , Transcription Factor MTF-1
14.
Cancer Res ; 59(6): 1315-22, 1999 Mar 15.
Article in English | MEDLINE | ID: mdl-10096565

ABSTRACT

Metallothioneins (MTs) are a family of stress-induced proteins with diverse physiological functions, including protection against metal toxicity and oxidants. They may also contribute to the regulation of cellular proliferation, apoptosis, and malignant progression. We reported previously that the human (h)MT-IIA isoform is induced in carcinoma cells (A431, SiHa, and HT29) exposed to low oxygen, conditions commonly found in solid tumors. The present study demonstrates that the genes for hMT-IIA and mouse (m)MT-I are transcriptionally activated by hypoxia through metal response elements (MREs) in their proximal promoter regions. These elements bind metal transcription factor-1 (MTF-1). Deletion and mutational analyses of the hMT-IIA promoter indicated that the hMRE-a element is essential for basal promoter activity and for induction by hypoxia, but that other elements contribute to the full transcriptional response. Functional studies of the mMT-I promoter demonstrated that at least two other MREs (mMRE-d and mMRE-c) are responsive to hypoxia. Multiple copies of either hMRE-a or mMRE-d conferred hypoxia responsiveness to a minimal MT promoter. Mouse MT-I gene transcripts in fibroblasts with targeted deletions of both MTF-1 alleles (MTF-1(-/-); dko7 cells) were not induced by zinc and showed low responsiveness to hypoxia. A transiently transfected MT promoter was unresponsive to hypoxia or zinc in dko7 cells, but inductions were restored by cotransfecting a mouse MTF-1 expression vector. Electrophoretic mobility shift assays detected a specific protein-DNA complex containing MTF-1 in nuclear extracts from hypoxic cells. Together, these results demonstrate that hypoxia activates MT gene expression through MREs and that this activation involves MTF-1.


Subject(s)
Gene Expression Regulation, Neoplastic , Metallothionein/genetics , Oxygen/metabolism , Promoter Regions, Genetic , Transcription Factors/metabolism , 3T3 Cells , Animals , Binding, Competitive , Cell Hypoxia/genetics , DNA-Binding Proteins , Fibroblasts/metabolism , HT29 Cells , Humans , Metallothionein/biosynthesis , Metals/metabolism , Mice , Oxidation-Reduction , RNA, Messenger/biosynthesis , Transcription Factors/genetics , Tumor Cells, Cultured , Transcription Factor MTF-1
15.
J Biol Chem ; 274(9): 5279-84, 1999 Feb 26.
Article in English | MEDLINE | ID: mdl-10026134

ABSTRACT

Metal response element-binding transcription factor-1 (MTF-1) binds specifically to metal response elements (MREs) and transactivates metallothionein (MT) gene expression in response to zinc and cadmium. This investigation contrasts the mechanism of mouse MT gene (mMT-I) promoter activation by cadmium and zinc in IMR-32 human neuroblastoma cells to determine whether MTF-1 binding to the MRE is necessary for activation by these metals. Cadmium activated a mMT-1 promoter (-150 base pairs) luciferase reporter 20-25-fold through a MRE-dependent mechanism. In contrast, zinc had little effect on the mMT-1 luciferase reporter. IMR-32 cells lacked MRE binding activity, and treatment with zinc in vitro or in vivo did not generate a MTF-1. MRE complex, suggesting that IMR-32 cells lack functional MTF-1. Overexpression of mMTF-1 regenerated a zinc-mediated induction of the MRE without affecting cadmium activation. Because no other transition metals tested activated the MRE, this effect appeared to be cadmium-specific. These data demonstrate that in IMR-32 human neuroblastoma cells, zinc and cadmium can use independent mechanisms for activation of the mMT-I promoter and cadmium-mediated MRE activation is independent of MTF-1 and zinc.


Subject(s)
Cadmium/pharmacology , Transcription Factors/metabolism , Base Sequence , DNA Primers , DNA-Binding Proteins , Enzyme Activation , Humans , Luciferases/metabolism , Neuroblastoma/metabolism , Neuroblastoma/pathology , Protein Binding , Tumor Cells, Cultured , Zinc/pharmacology , Transcription Factor MTF-1
16.
Biochem Pharmacol ; 57(9): 1031-5, 1999 May 01.
Article in English | MEDLINE | ID: mdl-10796073

ABSTRACT

Many iron(III)-selective chelators possess an appreciable affinity for zinc(II) and this can prove to be undesirable when such chelators are being assessed for clinical application. At present, there is no useful test available which can reliably access this problem. In the present manuscript, we provide evidence that indicates that a zinc-finger protein MTF-1, (metal transcription factor-1) may prove to be a suitable candidate. N,N',2-hydroxybenzyl ethylenediamine diacetic acid, in contrast to desferrioxamine, removes zinc quite efficiently from MTF-1.


Subject(s)
Iron Chelating Agents/metabolism , Iron/metabolism , Transcription Factors/metabolism , Zinc Fingers , Zinc/metabolism , Animals , Binding, Competitive , DNA-Binding Proteins , Deferiprone , Edetic Acid/analogs & derivatives , Edetic Acid/pharmacology , Iron/chemistry , Mice , Pyridones/pharmacology , Recombinant Proteins/drug effects , Recombinant Proteins/metabolism , Transcription Factors/drug effects , Zinc/chemistry , Transcription Factor MTF-1
17.
Nucleic Acids Res ; 26(22): 5182-9, 1998 Nov 15.
Article in English | MEDLINE | ID: mdl-9801317

ABSTRACT

The roles of the bHLH-Zip protein, upstream stimulatory factor (USF), in mouse metallothionein-I (MT-I) gene expression were examined. The promoter contains a putative USF binding site which overlaps an antioxidant response element (ARE) located at -101 bp relative to the transcription start point. The USF/ARE composite element increases basal expression of the mouse MT-I gene, and partly mediates response to oxidative stress. However, other functions of this composite element and the in vivo roles for USF in MT-I promoter functions have not been examined. We report studies which indicate that USF participates via the USF/ARE element in cadmium responsiveness of the mouse MT-I promoter. During the course of these studies a second, higher affinity USF binding site at -223 bp was identified. Stable and transient transfection assays in mouse hepatoma cells, using the USF/ARE in the context of a minimal promoter and site-directed and truncation mutants of the MT-I promoter, revealed that the USF and the ARE sites contribute to cadmium (2-30 microM) but not zinc responsiveness, and to basal promoter activity. Overexpression of dominant-negative (dn)USF in co-transfection assays significantly attenuated cadmium induction of the USF/ARE in the context of a minimal promoter, and attenuated cadmium, but not zinc, induction of the intact MT-I promoter. A consensus E-box (CACATG) at -223 bp in the MT-I promoter was also found to bind USF in vitro , and to be constitutively footprinted in vivo . The interaction of USF with E-box1 was apparently 10-fold stronger than that with the USF/ARE. However, in contrast, E-box1 was not a strong basal promoter element nor was it metal ions responsive in mouse Hepa cells. In conclusion, these studies demonstrate a role for USF in cadmium-specific induction of the mouse MT-I gene, but bring into question an obligate role for USF in regulating basal activity of this gene. The data further suggest that USF interacts with ARE-binding proteins to influence MT-I gene expression.


Subject(s)
Cadmium/toxicity , DNA-Binding Proteins , Metallothionein/genetics , Transcription Factors/metabolism , Animals , Base Sequence , Binding Sites/genetics , DNA/genetics , DNA/metabolism , Gene Expression/drug effects , Genes, Reporter , Mice , Molecular Sequence Data , Plasmids/genetics , Promoter Regions, Genetic , Transcription Factors/genetics , Transfection , Upstream Stimulatory Factors
18.
J Biol Chem ; 273(12): 7127-33, 1998 Mar 20.
Article in English | MEDLINE | ID: mdl-9507026

ABSTRACT

We examined the DNA binding activity of mouse and human MTF-1 in whole cell extracts from cells cultured in medium containing zinc or cadmium and from untreated cells after the in vitro addition of zinc or cadmium, as well as using recombinant MTF-1 transcribed and translated in vitro and treated with various transition metals. Incubation of human (HeLa) or mouse (Hepa) cells in medium containing cadmium (5-15 microM) did not lead to a significant increase (<2-fold) in the amount of MTF-1 DNA binding activity, whereas zinc (100 microM) led to a 6-15-fold increase within 1 h. MTF-1 binding activity was low, but detectable, in control whole cell extracts and was increased (>10-fold) after the in vitro addition of zinc (30 microM) and incubation at 37 degrees C for 15 min. In contrast, addition of cadmium (6 or 60 microM) did not activate MTF-1 binding activity. Recombinant mouse and human MTF-1 were also dependent on exogenous zinc for DNA binding activity. Cadmium did not facilitate activation of recombinant MTF-1, but instead inhibited the activation of the recombinant protein by zinc. Interestingly, glutathione (1 mM) protected recombinant MTF-1 from inactivation by cadmium, and allowed for activation by zinc. It was also noted that zinc-activated recombinant MTF-1 was protected from cadmium only when bound to DNA. These results suggest that cadmium interacts with the zinc fingers of MTF-1 and forms an inactive complex. Of the several transition metals (zinc, cadmium, nickel, silver, copper, and cobalt) examined, only zinc facilitated activation of the DNA binding activity of recombinant MTF-1. These data suggest that transition metals, other than zinc, that activate MT gene expression may do so by mechanisms independent of an increase in the DNA binding activity of MTF-1.


Subject(s)
DNA-Binding Proteins/metabolism , Metals/metabolism , Transcription Factors/metabolism , Zinc/metabolism , Animals , Base Sequence , Cell Line , DNA/metabolism , Glutathione/metabolism , HeLa Cells , Humans , Mice , Molecular Sequence Data , Recombinant Proteins/metabolism , Transcription Factor MTF-1
19.
Mol Cell Biol ; 17(5): 2781-9, 1997 May.
Article in English | MEDLINE | ID: mdl-9111349

ABSTRACT

The DNA-binding activity of the Zn finger protein metal response element-binding transcription factor 1 (MTF-1) was rapidly induced both in vivo in mouse Hepa cells, canine MDCK, and human HeLa cells after incubation in medium containing zinc and in vitro in whole-cell extracts to which zinc was added. Acquisition of DNA-binding capacity in the presence of free zinc was temperature and time dependent and did not occur at 4 degrees C. In contrast, activated MTF-1 binding to the metal response element occurred at 4 degrees C. After Zn activation, mouse MTF-1 binding activity was more sensitive to EDTA and was stabilized by DNA binding relative to the Zn finger transcription factor Sp1. After dilution of nuclear or whole-cell extracts from Zn-treated cells and incubation at 37 degrees C, mouse MTF-1 DNA-binding activity was no longer detected but could be completely reconstituted by the subsequent readdition of zinc. In vitro-synthesized, recombinant mouse MTF-1 displayed a similar, reversible temperature- and Zn-dependent activation of DNA-binding activity. Analysis of deletion mutants of recombinant MTF-1 suggests that the Zn finger domain is important for the Zn-dependent activation of DNA-binding capacity. Thus, mouse MTF-1 functions as a reversibly activated sensor of free zinc pools in the cell.


Subject(s)
DNA/metabolism , Transcription Factors/metabolism , Zinc Fingers , Zinc/metabolism , Animals , Antioxidants/pharmacology , Base Sequence , DNA-Binding Proteins , Dogs , Electrophoresis, Polyacrylamide Gel , HeLa Cells , Humans , Hydrogen Peroxide/pharmacology , Hydroquinones/pharmacology , Mice , Molecular Sequence Data , Sp1 Transcription Factor/metabolism , Temperature , Transcription Factor MTF-1
20.
J Biol Chem ; 271(42): 26233-41, 1996 Oct 18.
Article in English | MEDLINE | ID: mdl-8824273

ABSTRACT

Oxidative stress (tert-butylhydroquinone) rapidly induced metallothionein-I gene expression in mouse Hepa cells, and this effect was mediated predominantly through metal response promoter elements in transient transfection assays. In vivo genomic footprinting of the mouse metallothionein-I promoter after treatment of Hepa cells with hydrogen peroxide, tert-butylhydroquinone, or zinc suggested a rapid increase in occupancy of the metal response elements. More subtle changes also occurred in the constitutive genomic footprint at the composite major late transcription factor/antioxidant response element. This element may, in part, mediate induction by hydrogen peroxide. Electrophoretic mobility shift assays demonstrated a rapid (30 min) increase in the DNA binding activity of metal-responsive transcription factor-1 in Hepa cells treated with any of these inducers. In control cells, upstream stimulatory factor binding with the major late transcription factor site, and a nuclear protein complex distinct from AP-1, but specific for the antioxidant response element, were detected. The amounts of these complexes were not altered after these treatments. These studies indicate that metal-responsive transcription factor-1 plays a role in activating mouse metallothionein-I gene transcription in response to reactive oxygen species.


Subject(s)
Gene Expression Regulation , Metallothionein/genetics , Oxidative Stress , Promoter Regions, Genetic , Transcription Factors/metabolism , Animals , Antioxidants/pharmacology , Base Sequence , Binding Sites , Cell Line , DNA Footprinting , DNA-Binding Proteins , Electrophoresis, Polyacrylamide Gel , Gene Expression Regulation/drug effects , Hydrogen Peroxide/pharmacology , Hydroquinones/pharmacology , Mice , Molecular Sequence Data , Oxidation-Reduction , RNA, Messenger/metabolism , Transcription Factor AP-1/metabolism , Transcription, Genetic/drug effects , Transfection , Zinc/pharmacology , Transcription Factor MTF-1
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