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1.
Mar Drugs ; 21(2)2023 Jan 19.
Article in English | MEDLINE | ID: mdl-36827106

ABSTRACT

We have been very humbled by the decision of the Marine Drugs Editors to honor us with a Special Issue dedicated to our efforts over the past 50 years, as well as their invitation to write a guest editorial for this issue [...].

2.
Proc Natl Acad Sci U S A ; 117(39): 24165-24172, 2020 09 29.
Article in English | MEDLINE | ID: mdl-32929019

ABSTRACT

The Convention on Biological Diversity, and the Nagoya Protocol in particular, provide a framework for the fair and equitable sharing of benefits arising from the utilization of biological resources and traditional knowledge, and ultimately aim to promote capacity-building in the developing world. However, measuring capacity-building is a challenging task due to its intangible nature. By compiling and analyzing a database of scientific peer-reviewed publications over a period of 50 y (1965 to 2015), we investigated capacity-building in global marine natural product discovery. We used publication and authorship metrics to assess how the capacity to become scientifically proficient, prolific, and independent has changed in bioprospecting countries. Our results show that marine bioprospecting is a dynamically growing field of research with continuously increasing numbers of participating countries, publications, and scientists. Yet despite longstanding efforts to promote equitability and scientific independence, not all countries have similarly increased their capacity to explore marine biodiversity within their national jurisdiction areas. Although developing countries show an increasing trend in the number of publications, a few developed countries still account for almost one-half of all publications in the field. Multiple lines of evidence suggest that economic capacity affects how well countries with species-rich marine ecosystems can scientifically explore those resources. Overall, the capacity-building data analyzed here provides a timely contribution to the ongoing international debate about access to and benefit-sharing of biological resources for countries exploring biodiversity within and outside their national jurisdiction areas.


Subject(s)
Aquatic Organisms , Biodiversity , Biological Products , Bioprospecting/history , International Cooperation , History, 20th Century , History, 21st Century
3.
Nat Prod Rep ; 35(1): 8-53, 2018 01 16.
Article in English | MEDLINE | ID: mdl-29335692

ABSTRACT

Covering: 2016. Previous review: Nat. Prod. Rep., 2017, 34, 235-294This review covers the literature published in 2016 for marine natural products (MNPs), with 757 citations (643 for the period January to December 2016) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1277 in 432 papers for 2016), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included.


Subject(s)
Aquatic Organisms/chemistry , Biological Products/chemistry , Biological Products/pharmacology , Animals , Aquatic Organisms/metabolism , Bryozoa/chemistry , Chlorophyta/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Molecular Structure , Mollusca/chemistry , Phaeophyceae/chemistry , Phytoplankton/chemistry , Porifera/chemistry , Rhodophyta/chemistry , Seawater/microbiology , Urochordata/chemistry , Wetlands
4.
Nat Prod Rep ; 34(3): 235-294, 2017 03 17.
Article in English | MEDLINE | ID: mdl-28290569

ABSTRACT

Covering: 2015. Previous review: Nat. Prod. Rep., 2016, 33, 382-431This review covers the literature published in 2015 for marine natural products (MNPs), with 1220 citations (792 for the period January to December 2015) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1340 in 429 papers for 2015), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products/chemistry , Marine Biology , Animals , Biological Products/isolation & purification , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Eukaryota/chemistry , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Rhodophyta/chemistry , Urochordata/chemistry
5.
Nat Prod Rep ; 33(3): 382-431, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26837534

ABSTRACT

This review covers the literature published in 2014 for marine natural products (MNPs), with 1116 citations (753 for the period January to December 2014) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1378 in 456 papers for 2014), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products , Animals , Biological Products/chemical synthesis , Biological Products/chemistry , Biological Products/isolation & purification , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Marine Biology , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Porifera/chemistry , Rhodophyta/chemistry , Urochordata/chemistry
6.
Nat Prod Rep ; 33(6): 747-50, 2016 Jun 02.
Article in English | MEDLINE | ID: mdl-26892141

ABSTRACT

Covering: up to 2016Marine and terrestrial organisms yield a remarkable chemical diversity and are important sources for discovery of new chemical products. In order to maximize the bioprospecting efficiency of natural products (NP), taxonomy, geography and biodiversity are starting to be used to draw conclusions on which taxonomic groups and/or regions may be of interest for future research. However, accurate taxonomic information and sampling location of source organisms have often been overlooked. Although these issues were already reported a few decades ago and improvements have been made, such outstanding problems are still recurrent in recent peer-reviewed literature. Here, we focus on the importance of taxonomic and geographic identification of source material and illustrate how taxonomic and geographic data of source organisms continues to be poorly handled. It is our opinion that this issue needs to be discussed within the NP community with the ultimate goal of improving publication standards and guaranteeing the scientific principle of research reproducibility. Moreover, by doing so, it will be possible to take advantage of information available in the literature to develop cross-disciplinary meta-analyses that may help to advance the state of the art of NP research and future bioprospecting endeavours.


Subject(s)
Biological Products , Biodiversity , Biological Products/chemistry , Biological Products/classification , Molecular Structure , Reproducibility of Results
7.
Nat Prod Rep ; 32(2): 116-211, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25620233

ABSTRACT

This review covers the literature published in 2013 for marine natural products (MNPs), with 982 citations (644 for the period January to December 2013) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1163 for 2013), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products , Animals , Biological Products/chemistry , Biological Products/isolation & purification , Bryozoa/chemistry , Cnidaria/chemistry , Cyanobacteria/chemistry , Dinoflagellida/chemistry , Echinodermata/chemistry , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Plants , Porifera/chemistry , Rhizophoraceae/microbiology , Rhodophyta/chemistry , Urochordata/chemistry
8.
Nat Prod Rep ; 31(2): 160-258, 2014 Jan 17.
Article in English | MEDLINE | ID: mdl-24389707

ABSTRACT

This review covers the literature published in 2012 for marine natural products, with 1035 citations (673 for the period January to December 2012) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1241 for 2012), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products , Marine Biology , Animals , Biological Products/chemistry , Biological Products/isolation & purification , Biological Products/pharmacology , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Eukaryota , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Plants/chemistry , Porifera/chemistry , Urochordata/chemistry
9.
Nat Prod Rep ; 30(11): 1380-90, 2013 Oct 11.
Article in English | MEDLINE | ID: mdl-23982267

ABSTRACT

This review covers the literature published for marine natural products isolated from macroalgae and addresses the taxonomic details of source organisms, the chemical types of isolated compounds and the location of sampling sites. The emphasis of this review is on the identification of the most bioprospected taxa and regions, as well as on how these trends have shifted over time.


Subject(s)
Biological Products , Seaweed/chemistry , Biological Products/chemistry , Biological Products/classification , Biological Products/isolation & purification , Marine Biology
10.
Nat Prod Rep ; 30(2): 237-323, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23263727

ABSTRACT

This review covers the literature published in 2011 for marine natural products, with 870 citations (558 for the period January to December 2011) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1152 for 2011), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products , Marine Biology , Actinomyces/chemistry , Animals , Biological Products/chemistry , Biological Products/isolation & purification , Biological Products/pharmacology , Bryozoa/chemistry , Echinodermata/chemistry , Lactams/chemistry , Lactams/isolation & purification , Molecular Structure , Mollusca/chemistry , Plants, Medicinal/chemistry , Porifera/chemistry , Urochordata/chemistry
11.
J Biomed Biotechnol ; 2012: 894708, 2012.
Article in English | MEDLINE | ID: mdl-22291452

ABSTRACT

The application of an HPLC bioactivity profiling/microtiter plate technique in conjunction with microprobe NMR instrumentation and access to the AntiMarin database has led to the isolation of a new 1. In this example, 1 was isolated from a cytotoxic fraction of an extract obtained from marine-derived Streptomyces sp. cultured on Starch Casein Agar (SCA) medium. The 1D and 2D (1)H NMR and ESIMS data obtained from 20 µg of compound 1 fully defined the structure. The known 2 was also isolated and readily dereplicated using this approach.


Subject(s)
Drug Screening Assays, Antitumor/methods , Pyrrolizidine Alkaloids/isolation & purification , Streptomyces/chemistry , Water Microbiology , Animals , Cell Line, Tumor , Chromatography, High Pressure Liquid/methods , Magnetic Resonance Spectroscopy/methods , Marine Biology , Mice , Molecular Structure , Pyrrolizidine Alkaloids/chemistry , Sulfur Compounds/chemical synthesis , Sulfur Compounds/isolation & purification
12.
Nat Prod Rep ; 29(2): 144-222, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22193773

ABSTRACT

Covering: 2010. Previous review: Nat. Prod. Rep., 2011, 28, 196. This review covers the literature published in 2010 for marine natural products, with 895 citations (590 for the period January to December 2010) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1003 for 2010), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products/chemistry , Biological Products/isolation & purification , Marine Biology , Animals , Biological Products/chemical synthesis , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Porifera/chemistry , Rhodophyta/chemistry , Urochordata/chemistry
14.
J Nat Prod ; 73(10): 1686-93, 2010 Oct 22.
Article in English | MEDLINE | ID: mdl-20860391

ABSTRACT

Investigations of four different sponge populations of Latrunculia species collected in New Zealand waters has led to the characterization of a new diastereomer of discorhabdin H, named discorhabdin H2, confirmation of the structure of discorhabdin K ((+)-7), and presentation of a new diastereomer, discorhabdin K2 ((-)-8). In each case the structures were established by extensive NMR and MS studies and the absolute configurations interrogated by electronic circular dichroism (ECD). Absolute configurations were assigned to the known metabolites discorhabdins H, D, 2-hydroxy-D, N, and Q by comparison of ECD spectra with those recorded for discorhabdin alkaloids of defined absolute configuration, while the configurations of discorhabdins S, T, and U were assigned by semisynthesis from (+)-(6S,8S)-discorhabdin B.


Subject(s)
Porifera/chemistry , Pyrroles/chemistry , Pyrroles/isolation & purification , Quinones/chemistry , Quinones/isolation & purification , Spiro Compounds/chemistry , Spiro Compounds/isolation & purification , Alkaloids/chemistry , Animals , Molecular Structure , New Zealand , Quinolones , Stereoisomerism , Thiazepines
16.
J Med Chem ; 53(12): 4808-12, 2010 Jun 24.
Article in English | MEDLINE | ID: mdl-20503968

ABSTRACT

Despite extensive effort, the drug target dihydrodipicolinate synthase (DHDPS) continues to evade effective inhibition. We used NMR spectroscopy to examine the substrate specificity of this enzyme and found that two pyruvate analogues previously classified as weak competitive inhibitors were turned over productively by DHDPS. Four other analogues were confirmed not to be substrates. Finally, our examination of the natural product of DHDPS and its degradation revealed that dihydrodipicolinate reductase (DHDPR) possesses previously unrecognized dehydratase activity.


Subject(s)
Dihydrodipicolinate Reductase/chemistry , Hydro-Lyases/chemistry , Dihydrodipicolinate Reductase/antagonists & inhibitors , Hydro-Lyases/antagonists & inhibitors , Magnetic Resonance Spectroscopy , Models, Molecular , Picolinic Acids/chemistry , Pyruvates/chemistry , Substrate Specificity
17.
Nat Prod Rep ; 27(2): 165-237, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20111802

ABSTRACT

This review covers the literature published in 2008 for marine natural products, with 829 citations (613 for the period January to December 2008) referring to compounds isolated from marine microorganisms and phytoplankton, green algae, brown algae, red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1065 for 2008), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.


Subject(s)
Biological Products , Marine Biology , Animals , Biological Products/chemistry , Biological Products/isolation & purification , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Eukaryota/chemistry , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Porifera/chemistry , Urochordata/chemistry , Verbenaceae/chemistry
18.
J Nat Prod ; 72(3): 477-9, 2009 Mar 27.
Article in English | MEDLINE | ID: mdl-19323568

ABSTRACT

Fermentation of a Penicillium sp. isolated from a surface-sterilized thallus segment of the brown alga Xiphophora gladiata, collected from Macrocarpa Point, Otago, New Zealand, in half-strength potato dextrose broth led to the isolation and characterization of three alkaloids: the known N-hydroxy-2-pyridone, PF1140 (1), and two new 2-pyridones, 2 and 3.


Subject(s)
Alkaloids/isolation & purification , Penicillium/chemistry , Pyridones/isolation & purification , Alkaloids/chemistry , Animals , Benzopyrans/chemistry , Benzopyrans/isolation & purification , Leukemia P388 , Marine Biology , Mice , Molecular Structure , New Zealand , Phaeophyceae/microbiology , Pyridones/chemistry , Structure-Activity Relationship
19.
J Am Chem Soc ; 131(8): 2780-1, 2009 Mar 04.
Article in English | MEDLINE | ID: mdl-19206228

ABSTRACT

The complex polyketide pederin is a potent antitumor agent isolated from Paederus spp. rove beetles. We have previously isolated a set of genes from a bacterial endosymbiont that are good candidates for pederin biosynthesis. To biochemically study this pathway, we expressed three methyltransferases from the putative pederin pathway and used the partially unmethylated analogue mycalamide A from the marine sponge Mycale hentscheli as test substrate. Analysis by high-resolution MS/MS and NMR revealed that PedO regiospecifically methylates the marine compound to generate the nonnatural hybrid compound 18-O-methylmycalamide A with increased cytotoxicity. To our knowledge, this is the first biochemical evidence that invertebrates can obtain defensive complex polyketides from bacterial symbionts.


Subject(s)
Methyltransferases/metabolism , Pseudomonas/metabolism , Pyrans/metabolism , Animals , Leukemia P388/drug therapy , Methyltransferases/chemistry , Methyltransferases/genetics , Mice , Nuclear Magnetic Resonance, Biomolecular , Porifera/chemistry , Porifera/metabolism , Pseudomonas/genetics , Pyrans/chemistry , Pyrans/pharmacology , Symbiosis , Tandem Mass Spectrometry
20.
Nat Prod Rep ; 26(2): 170-244, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19177222

ABSTRACT

This review covers the literature published in 2007 for marine natural products, with 948 citations(627 for the period January to December 2007) referring to compounds isolated from marine microorganisms and phytoplankton, green algae, brown algae, red algae, sponges, cnidarians,bryozoans, molluscs, tunicates, echinoderms and true mangrove plants. The emphasis is on new compounds (961 for 2007), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.1 Introduction, 2 Reviews, 3 Marine microorganisms and phytoplankton, 4 Green algae, 5 Brown algae, 6 Red algae, 7 Sponges, 8 Cnidarians, 9 Bryozoans, 10 Molluscs, 11 Tunicates (ascidians),12 Echinoderms, 13 Miscellaneous, 14 Conclusion, 15 References.


Subject(s)
Biological Products , Marine Biology , Animals , Biological Products/chemistry , Biological Products/isolation & purification , Bryozoa/chemistry , Cnidaria/chemistry , Echinodermata/chemistry , Eukaryota/chemistry , Molecular Structure , Mollusca/chemistry , Phytoplankton/chemistry , Porifera/chemistry , Urochordata/chemistry
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