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1.
Eur J Clin Microbiol Infect Dis ; 37(11): 2211-2217, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30143939

ABSTRACT

Human Parainfluenzaviruses (PIVs) account for a significant proportion of viral acute respiratory infections (ARIs) in children, and are also associated with morbidity and mortality in adults, including nosocomial infections. This work aims to describe PIV genotypes and their clinical and epidemiological distribution. Between December 2016 and December 2017, 6121 samples were collected, and submitted to viral culture and genomic quantification, specifically Parainfluenza 1-4 (PIV1-4), Influenza A and B, Respiratory Syncytial Virus (RSV) A and B, Adenovirus, Metapneumovirus, Coronavirus, Rhinovirus, and Enterovirus. Normalized viral load, as (log10) copies/103 cells, was calculated as virus Ct, determined by multiple qRT-PCR, as a function of the Ct of ß-globin. PIV was confirmed in 268 cases (4.37%), and linked to both upper and lower respiratory tract disease, being more frequent in children than in adults (5.23 and 2.43%, respectively). PIV1 and PIV3 were most common (31 and 32.5%, of total PIV positive samples, respectively), with distribution being similar in children and adults, as was viral load. PIV type was correlated with seasonality: PIV3 being more frequent in winter and spring, PIV1 in summer, and PIV 4 in fall. No correlation between vial load and clinical severity was found. Novel findings were that PIV viral load was higher in fall than in other seasons, and PIV4, classically linked to mild respiratory symptoms, was circulating, in children and adults, at all levels of symptoms throughout the year.


Subject(s)
Respiratory Tract Infections/epidemiology , Respiratory Tract Infections/virology , Respirovirus Infections/epidemiology , Respirovirus Infections/virology , Respirovirus , Seasons , Adolescent , Adult , Child , Female , Genome, Viral , Humans , Incidence , Male , Molecular Typing , Respirovirus/classification , Respirovirus/genetics , Respirovirus Infections/diagnosis , Viral Load , Young Adult
2.
Enferm. infecc. microbiol. clín. (Ed. impr.) ; 30(7): 367-370, sept. 2012. ilus, tab
Article in English | IBECS | ID: ibc-104132

ABSTRACT

Introducción Aunque los síntomas clínicos causados por el virus de la gripe nueva (IAn/H1N1) son leves e indistinguibles de los causados por los virus de la gripe estacionales, existen pocos datos que comparenlas características clínicas de la infección por IAn/H1N1 con las de otros virus respiratorios. Por ello, se estudiaron la incidencia, los aspectos clínicos y la distribución temporal de los virus respiratorios circulantes durante el período de la pandemia gripal. Métodos: Se recogieron muestras respiratorias de pacientes con síntomas de gripe desde mayo de 2009 a diciembre de 2009. Diferentes virus respiratorios fueron detectados mediante métodos convencionales de cultivo y técnicas de (..) (AU)


Introduction Although new influenza virus (IAn/H1N1) infections are mild and indistinguishable from any other seasonal influenza virus infections, there are few data on comparisons of the clinical features of infection with (IAn/H1N1) and with other respiratory viruses. The incidence, clinical aspects and temporal distribution of those respiratory viruses circulating during flu pandemic period were studied. Methods Respiratory samples from patients with acute influenza-like symptoms were collected from May 2009 to December 2009. Respiratory viruses were detected by conventional culture methods and genome amplification techniques. Results Although IAn/H1N1 was the virus most frequently detected, several other respiratory viruses co-circulated with IAn/H1N1 during the pandemic period, especially rhinovirus. The similarity between clinical signs included in the clinical case definition for influenza and those caused by other respiratory viruses, particularly rhinovirus, suggest that a high percentage of viral infections were clinically diagnosed as case of influenza. Conclusions Our study offers useful information to face future pandemics caused by influenza virus, indicating that differential diagnoses are required in order to not overestimate the importance of the pandemic (AU)


Subject(s)
Humans , Influenza, Human/microbiology , Rhinovirus/isolation & purification , Respiratory Tract Infections/microbiology , /isolation & purification , Pandemics , Virus Diseases/microbiology , Diagnostic Errors/prevention & control
3.
Enferm Infecc Microbiol Clin ; 30(7): 367-70, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22341748

ABSTRACT

INTRODUCTION: Although new influenza virus (IAn/H1N1) infections are mild and indistinguishable from any other seasonal influenza virus infections, there are few data on comparisons of the clinical features of infection with (IAn/H1N1) and with other respiratory viruses. The incidence, clinical aspects and temporal distribution of those respiratory viruses circulating during flu pandemic period were studied. METHODS: Respiratory samples from patients with acute influenza-like symptoms were collected from May 2009 to December 2009. Respiratory viruses were detected by conventional culture methods and genome amplification techniques. RESULTS: Although IAn/H1N1 was the virus most frequently detected, several other respiratory viruses co-circulated with IAn/H1N1 during the pandemic period, especially rhinovirus. The similarity between clinical signs included in the clinical case definition for influenza and those caused by other respiratory viruses, particularly rhinovirus, suggest that a high percentage of viral infections were clinically diagnosed as case of influenza. CONCLUSIONS: Our study offers useful information to face future pandemics caused by influenza virus, indicating that differential diagnoses are required in order to not overestimate the importance of the pandemic.


Subject(s)
Common Cold/diagnosis , Influenza A Virus, H1N1 Subtype , Influenza, Human/diagnosis , Rhinovirus , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Common Cold/epidemiology , Humans , Incidence , Infant , Influenza, Human/epidemiology , Middle Aged , Seasons , Spain/epidemiology , Young Adult
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