Nitrous acid production and uptake by Zea mays plants in growth chambers in the presence of nitrogen dioxide.

Nitrous acid (HONO) photolysis is an important atmospheric reaction that leads to the formation of hydroxyl radicals (OH), the main diurnal atmospheric oxidants. The process of HONO formation remains unclear, and comparisons between field measurements and model results have highlighted the presence of unknown HONO sources. HONO production on plant surfaces was recently suggested to contribute to atmospheric HONO formation, but there is limited information on the quantification of HONO production and uptake by plants. To address this gap in the existing knowledge, the current study investigated HONO exchange on living Zea mays plants. Experiments were conducted in growth chambers under controlled experimental conditions (temperature, relative humidity, NO2 mixing ratio, light intensity, CO2 mixing ratio) at temperatures ranging between 283 and 299 K. To investigate the effect of drought on HONO plant-atmosphere exchanges, experiments were carried out on two sets of Zea mays plants exposed to two different water supply conditions during their growth: optimal watering (70% of the field capacity) and water stress (30% of the field capacity). Results indicated that the uptake of HONO by control Zea mays plants increased linearly with ambient temperature, and was correlated with CO2 assimilation for temperatures ranging from 283 to 299 K. At 299 K, HONO production on the leaves offset this uptake and Zea mays plants were a source of HONO, with a net production rate of 27 ± 7 ppt h-1. Deposition velocities were higher for HONO than CO2, suggesting a higher mesophyll resistance for CO2 than HONO. As water stress reduced the stomatal opening, it also decreased plant-atmosphere gas exchange. Thus, climate change, which may limit the availability of water, will have an impact on HONO exchange between plants and the atmosphere.

Detrimental effect of the 6 His C-terminal tag on YedY enzymatic activity and influence of the TAT signal sequence on YedY synthesis.

BACKGROUND: YedY, a molybdoenzyme belonging to the sulfite oxidase family, is found in most Gram-negative bacteria. It contains a twin-arginine signal sequence that is cleaved after its translocation into the periplasm. Despite a weak reductase activity with substrates such as dimethyl sulfoxide or trimethylamine N-oxide, its natural substrate and its role in the cell remain unknown. Although sequence conservation of the YedY family displays a strictly conserved hydrophobic C-terminal residue, all known studies on Escherichia coli YedY have been performed with an enzyme containing a 6 histidine-tag at the C-terminus which could hamper enzyme activity. RESULTS: In this study, we demonstrate that the tag fused to the C-terminus of Rhodobacter sphaeroides YedY is detrimental to the enzyme's reductase activity and results in an eight-fold decrease in catalytic efficiency. Nonetheless this C-terminal tag does not influence the properties of the molybdenum active site, as assayed by EPR spectroscopy. When a cleavable His-tag was fused to the N-terminus of the mature enzyme in the absence of the signal sequence, YedY was expressed and folded with its cofactor. However, when the signal sequence was added upstream of the N-ter tag, the amount of enzyme produced was approximately ten-fold higher. CONCLUSION: Our study thus underscores the risk of using a C-terminus tagged enzyme while studying YedY, and presents an alternative strategy to express signal sequence-containing enzymes with an N-terminal tag. It brings new insights into molybdoenzyme maturation in R. sphaeroides showing that for some enzymes, maturation can occur in the absence of the signal sequence but that its presence is required for high expression of active enzyme.

Major Mo(V) EPR signature of Rhodobacter sphaeroides periplasmic nitrate reductase arising from a dead-end species that activates upon reduction. Relation to other molybdoenzymes from the DMSO reductase family.

Enzymes of the DMSO reductase family use a mononuclear Mo-bis(molybdopterin) cofactor (MoCo) to catalyze a variety of oxo-transfer reactions. Much functional information on nitrate reductase, one of the most studied members of this family, has been gained from EPR spectroscopy, but this technique is not always conclusive because the signature of the MoCo is heterogeneous, and which signals correspond to active species is still unsure. We used site-directed mutagenesis, EPR and protein film voltammetry to demonstrate that the MoCo in R. sphaeroides periplasmic nitrate reductase (NapAB) is subject to an irreversible reductive activation process whose kinetics we precisely define. This activation quantitatively correlates with the disappearance of the so-called "Mo(V) high-g" EPR signal, but this reductive process is too slow to be part of the normal catalytic cycle. Therefore, in NapAB, this most intense and most commonly observed signature of the MoCo arises from a dead-end, inactive state that gives a catalytically competent species only after reduction. This activation proceeds, even without substrate, according to a reduction followed by an irreversible nonredox step, both of which are pH independent. An apparently similar process occurs in other nitrate reductases (both assimilatory and membrane bound), and this also recalls the redox cycling procedure, which activates periplasmic DMSO reductases and simplifies their spectroscopic signatures. Hence we propose that heterogeneity at the active site and reductive activation are common properties of enzymes from the DMSO reductase family. Regarding NapAB, the fact that we could detect no Mo EPR signal upon reoxidizing the fully reduced enzyme suggests that the catalytically active form of the Mo(V) is thermodynamically unstable, as is the case for other enzymes of the DMSO reductase family. Our original approach, which combines spectroscopy and protein film voltammetry, proves useful for discriminating the forms of the active site on the basis of their catalytic properties. This could be applied to other enzymes for which the question arises as to the catalytic relevance of certain long-lived, spectroscopically characterized species.