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1.
Cell Rep ; 42(3): 112215, 2023 03 28.
Article in English | MEDLINE | ID: mdl-36917609

ABSTRACT

Drugs targeting microtubules rely on the mitotic checkpoint to arrest cell proliferation. The prolonged mitotic arrest induced by such drugs is followed by a G1 arrest. Here, we follow for several weeks the fate of G1-arrested human cells after treatment with nocodazole. We find that a small fraction of cells escapes from the arrest and resumes proliferation. These escaping cells experience reduced DNA damage and p21 activation. Cells surviving treatment are enriched for anti-apoptotic proteins, including Triap1. Increasing Triap1 levels allows cells to survive the first treatment with reduced DNA damage and lower levels of p21; accordingly, decreasing Triap1 re-sensitizes cells to nocodazole. We show that Triap1 upregulation leads to the retention of cytochrome c in the mitochondria, opposing the partial activation of caspases caused by nocodazole. In summary, our results point to a potential role of Triap1 upregulation in the emergence of resistance to drugs that induce prolonged mitotic arrest.


Subject(s)
Apoptosis , Mitosis , Humans , Nocodazole/pharmacology , Up-Regulation , Cell Proliferation , G1 Phase , Intracellular Signaling Peptides and Proteins/genetics
2.
EMBO J ; 40(22): e108225, 2021 11 15.
Article in English | MEDLINE | ID: mdl-34605051

ABSTRACT

Cells with blocked microtubule polymerization are delayed in mitosis, but eventually manage to proliferate despite substantial chromosome missegregation. While several studies have analyzed the first cell division after microtubule depolymerization, we have asked how cells cope long-term with microtubule impairment. We allowed 24 clonal populations of yeast cells with beta-tubulin mutations preventing proper microtubule polymerization, to evolve for ˜150 generations. At the end of the laboratory evolution experiment, cells had regained the ability to form microtubules and were less sensitive to microtubule-depolymerizing drugs. Whole-genome sequencing identified recurrently mutated genes, in particular for tubulins and kinesins, as well as pervasive duplication of chromosome VIII. Recreating these mutations and chromosome VIII disomy prior to evolution confirmed that they allow cells to compensate for the original mutation in beta-tubulin. Most of the identified mutations did not abolish function, but rather restored microtubule functionality. Analysis of the temporal order of resistance development in independent populations repeatedly revealed the same series of events: disomy of chromosome VIII followed by a single additional adaptive mutation in either tubulins or kinesins. Since tubulins are highly conserved among eukaryotes, our results have implications for understanding resistance to microtubule-targeting drugs widely used in cancer therapy.


Subject(s)
Epistasis, Genetic , Microtubules/metabolism , Mutation , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/genetics , Adaptation, Biological/genetics , Aneuploidy , Chromosomes, Fungal , Gene Expression Regulation, Fungal , Microtubules/genetics , Polymerization , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Whole Genome Sequencing
3.
Cell Rep ; 30(1): 137-152.e5, 2020 01 07.
Article in English | MEDLINE | ID: mdl-31914381

ABSTRACT

T follicular helper (Tfh) cells are fundamental for B cell selection and antibody maturation in germinal centers. Circulating Tfh (cTfh) cells constitute a minor proportion of the CD4+ T cells in peripheral blood, but their clonotypic relationship to Tfh populations resident in lymph nodes and the extent to which they differ from non-Tfh CD4+ cells have been unclear. Using donor-matched blood and tonsil samples, we investigate T cell receptor (TCR) sharing between tonsillar Tfh cells and peripheral Tfh and non-Tfh cell populations. TCR transcript sequencing reveals considerable clonal overlap between peripheral and tonsillar Tfh cell subsets as well as a clear distinction between Tfh and non-Tfh cells. Furthermore, influenza-specific cTfh cell clones derived from blood can be found in the repertoire of tonsillar Tfh cells. Therefore, human blood samples can be used to gain insight into the specificity of Tfh responses occurring in lymphoid tissues, provided that cTfh subsets are studied.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , Clone Cells/cytology , Palatine Tonsil/immunology , T Follicular Helper Cells/immunology , Adolescent , Adult , Cell Size , Computer Simulation , Hemagglutinin Glycoproteins, Influenza Virus/immunology , Humans , Lymphocyte Subsets/immunology , Middle Aged , Receptors, CXCR3/metabolism , Tissue Donors , Young Adult
4.
PLoS Comput Biol ; 14(9): e1006449, 2018 09.
Article in English | MEDLINE | ID: mdl-30199529

ABSTRACT

The mitotic checkpoint (also called spindle assembly checkpoint) is a signaling pathway that ensures faithful chromosome segregation. Mitotic checkpoint proteins inhibit the anaphase-promoting complex (APC/C) and its activator Cdc20 to prevent precocious anaphase. Checkpoint signaling leads to a complex of APC/C, Cdc20, and checkpoint proteins, in which the APC/C is inactive. In principle, this final product of the mitotic checkpoint can be obtained via different pathways, whose relevance still needs to be fully ascertained experimentally. Here, we use mathematical models to compare the implications on checkpoint response of the possible pathways leading to APC/C inhibition. We identify a previously unrecognized funneling effect for Cdc20, which favors Cdc20 incorporation into the inhibitory complex and therefore promotes checkpoint activity. Furthermore, we find that the presence or absence of one specific assembly reaction determines whether the checkpoint remains functional at elevated levels of Cdc20, which can occur in cancer cells. Our results reveal the inhibitory logics behind checkpoint activity, predict checkpoint efficiency in perturbed situations, and could inform molecular strategies to treat malignancies that exhibit Cdc20 overexpression.


Subject(s)
Anaphase-Promoting Complex-Cyclosome , Cdc20 Proteins/metabolism , Cell Cycle Proteins/metabolism , Chromosome Segregation , Mitosis/genetics , Schizosaccharomyces pombe Proteins/metabolism , Schizosaccharomyces/cytology , Anaphase , Cell Cycle Proteins/antagonists & inhibitors , Cell Nucleus/metabolism , Models, Theoretical , Protein Binding , Signal Transduction , Spindle Apparatus/metabolism
5.
Curr Biol ; 28(1): 28-37.e7, 2018 01 08.
Article in English | MEDLINE | ID: mdl-29249657

ABSTRACT

Improperly attached chromosomes activate the mitotic checkpoint that arrests cell division before anaphase. Cells can maintain an arrest for several hours but eventually will resume proliferation, a process we refer to as adaptation. Whether adapting cells bypass an active block or whether the block has to be removed to resume proliferation is not clear. Likewise, it is not known whether all cells of a genetically homogeneous population are equally capable to adapt. Here, we show that the mitotic checkpoint is operational when yeast cells adapt and that each cell has the same propensity to adapt. Our results are consistent with a model of the mitotic checkpoint where adaptation is driven by random fluctuations of APC/CCdc20, the molecular species inhibited by the checkpoint. Our data provide a quantitative framework for understanding how cells overcome a constant stimulus that halts cell cycle progression.


Subject(s)
Chromosomes, Fungal/physiology , M Phase Cell Cycle Checkpoints/physiology , Nocodazole/adverse effects , Saccharomyces cerevisiae/physiology , Tubulin Modulators/adverse effects , Adaptation, Physiological , Models, Theoretical , Stochastic Processes
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