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1.
Brain ; 147(5): 1784-1798, 2024 May 03.
Article in English | MEDLINE | ID: mdl-38387080

ABSTRACT

The Huntington's disease mutation is a CAG repeat expansion in the huntingtin gene that results in an expanded polyglutamine tract in the huntingtin protein. The CAG repeat is unstable and expansions of hundreds of CAGs have been detected in Huntington's disease post-mortem brains. The age of disease onset can be predicted partially from the length of the CAG repeat as measured in blood. Onset age is also determined by genetic modifiers, which in six cases involve variation in DNA mismatch repair pathways genes. Knocking-out specific mismatch repair genes in mouse models of Huntington's disease prevents somatic CAG repeat expansion. Taken together, these results have led to the hypothesis that somatic CAG repeat expansion in Huntington's disease brains is required for pathogenesis. Therefore, the pathogenic repeat threshold in brain is longer than (CAG)40, as measured in blood, and is currently unknown. The mismatch repair gene MSH3 has become a major focus for therapeutic development, as unlike other mismatch repair genes, nullizygosity for MSH3 does not cause malignancies associated with mismatch repair deficiency. Potential treatments targeting MSH3 currently under development include gene therapy, biologics and small molecules, which will be assessed for efficacy in mouse models of Huntington's disease. The zQ175 knock-in model carries a mutation of approximately (CAG)185 and develops early molecular and pathological phenotypes that have been extensively characterized. Therefore, we crossed the mutant huntingtin allele onto heterozygous and homozygous Msh3 knockout backgrounds to determine the maximum benefit of targeting Msh3 in this model. Ablation of Msh3 prevented somatic expansion throughout the brain and periphery, and reduction of Msh3 by 50% decreased the rate of expansion. This had no effect on the deposition of huntingtin aggregation in the nuclei of striatal neurons, nor on the dysregulated striatal transcriptional profile. This contrasts with ablating Msh3 in knock-in models with shorter CAG repeat expansions. Therefore, further expansion of a (CAG)185 repeat in striatal neurons does not accelerate the onset of molecular and neuropathological phenotypes. It is striking that highly expanded CAG repeats of a similar size in humans cause disease onset before 2 years of age, indicating that somatic CAG repeat expansion in the brain is not required for pathogenesis. Given that the trajectory for somatic CAG expansion in the brains of Huntington's disease mutation carriers is unknown, our study underlines the importance of administering treatments targeting somatic instability as early as possible.


Subject(s)
Huntingtin Protein , Huntington Disease , Trinucleotide Repeat Expansion , Huntington Disease/genetics , Huntington Disease/therapy , Animals , Humans , Trinucleotide Repeat Expansion/genetics , Mice , Huntingtin Protein/genetics , MutS Homolog 3 Protein/genetics , Disease Models, Animal , Nerve Tissue Proteins/genetics , Brain/pathology , Brain/metabolism
2.
Cell Rep Med ; 1(2)2020 05 19.
Article in English | MEDLINE | ID: mdl-32577625

ABSTRACT

While metabolic changes are considered a cancer hallmark, their assessment has not been incorporated in the detection of early or precancers, when treatment is most effective. Here, we demonstrate that metabolic changes are detected in freshly excised human cervical precancerous tissues using label-free, non-destructive imaging of the entire epithelium. The images rely on two-photon excited fluorescence from two metabolic co-enzymes, NAD(P)H and FAD, and have micron-level resolution, enabling sensitive assessments of the redox ratio and mitochondrial fragmentation, which yield metrics of metabolic function and heterogeneity. Simultaneous characterization of morphological features, such as the depth-dependent variation of the nuclear:cytoplasmic ratio, is demonstrated. Multi-parametric analysis combining several metabolic metrics with morphological ones enhances significantly the diagnostic accuracy of identifying high-grade squamous intraepithelial lesions. Our results motivate the translation of such functional metabolic imaging to in vivo studies, which may enable improved identification of cervical lesions, and other precancers, at the bedside.


Subject(s)
Cervix Uteri/diagnostic imaging , Optical Imaging/methods , Precancerous Conditions/diagnosis , Uterine Cervical Dysplasia/diagnosis , Uterine Cervical Neoplasms/diagnosis , Cervix Uteri/metabolism , Cervix Uteri/pathology , Epithelium/diagnostic imaging , Epithelium/metabolism , Epithelium/pathology , Female , Flavin-Adenine Dinucleotide/metabolism , Humans , Metabolic Networks and Pathways , Mitochondrial Dynamics/physiology , NAD/metabolism , NADP/metabolism , Precancerous Conditions/metabolism , Reproducibility of Results , Sensitivity and Specificity , Staining and Labeling
3.
PLoS One ; 11(3): e0151353, 2016.
Article in English | MEDLINE | ID: mdl-26986200

ABSTRACT

In this study the effect of thermal treatment on the equilibrium moisture content, chemical composition and biological resistance to decay fungi of juvenile and mature Hevea brasiliensis wood (rubber wood) was evaluated. Samples were taken from a 53-year-old rubber wood plantation located in Tabapuã, Sao Paulo, Brazil. The samples were thermally-modified at 180°C, 200°C and 220°C. Results indicate that the thermal modification caused: (1) a significant increase in the extractive content and proportional increase in the lignin content at 220°C; (2) a significant decrease in the equilibrium moisture content, holocelluloses, arabinose, galactose and xylose content, but no change in glucose content; and (3) a significant increase in wood decay resistance against both Pycnoporus sanguineus (L.) Murrill and Gloeophyllum trabeum (Pers.) Murrill decay fungi. The greatest decay resistance was achieved from treatment at 220°C which resulted in a change in wood decay resistance class from moderately resistant to resistant. Finally, this study also demonstrated that the influence of thermal treatment in mature wood was lower than in juvenile wood.


Subject(s)
Basidiomycota , Hevea/chemistry , Wood/chemistry , Brazil , Hevea/microbiology , Hot Temperature , Humans , Wood/microbiology
4.
J Pharmacol Exp Ther ; 357(2): 423-31, 2016 May.
Article in English | MEDLINE | ID: mdl-26907621

ABSTRACT

Racecadotril (acetorphan) is a neutral endopeptidase (NEP) inhibitor with known antidiarrheal activity in animals and humans; however, in humans, it suffers from shortcomings that might be improved with newer drugs in this class that have progressed to the clinic for nonenteric disease indications. To identify potentially superior NEP inhibitors with immediate clinical utility for diarrhea treatment, we compared their efficacy and pharmacologic properties in a rat intestinal hypersecretion model. Racecadotril and seven other clinical-stage inhibitors of NEP were obtained or synthesized. Enzyme potency and specificity were compared using purified peptidases. Compounds were orally administered to rats before administration of castor oil to induce diarrhea. Stool weight was recorded over 4 hours. To assess other pharmacologic properties, select compounds were orally administered to normal or castor oil-treated rats, blood and tissue samples collected at multiple time points, and active compound concentrations determined by mass spectroscopy. NEP enzyme activity was measured in tissue homogenates. Three previously untested clinical NEP inhibitors delayed diarrhea onset and reduced total stool output, with little or no effect on intestinal motility assessed by the charcoal meal test. Each was shown to be a potent, highly specific inhibitor of NEP. Each exhibited greater suppression of NEP activity in intestinal and nonintestinal tissues than did racecadotril and sustained this inhibition longer. These results suggest that newer clinical-stage NEP inhibitors originally developed for other indications may be directly repositioned for treatment of acute secretory diarrhea and offer advantages over racecadotril, such as less frequent dosing and potentially improved efficacy.


Subject(s)
Antidiarrheals/therapeutic use , Diarrhea/drug therapy , Endopeptidases/metabolism , Protease Inhibitors/therapeutic use , Thiorphan/analogs & derivatives , Animals , Castor Oil , Charcoal/pharmacology , Diarrhea/chemically induced , Dose-Response Relationship, Drug , Feces , Gastrointestinal Motility/drug effects , Male , Rats , Rats, Wistar , Thiorphan/therapeutic use
5.
N Engl J Med ; 365(14): 1304-14, 2011 Oct 06.
Article in English | MEDLINE | ID: mdl-21991952

ABSTRACT

BACKGROUND: Before 1971, several million women were exposed in utero to diethylstilbestrol (DES) given to their mothers to prevent pregnancy complications. Several adverse outcomes have been linked to such exposure, but their cumulative effects are not well understood. METHODS: We combined data from three studies initiated in the 1970s with continued long-term follow-up of 4653 women exposed in utero to DES and 1927 unexposed controls. We assessed the risks of 12 adverse outcomes linked to DES exposure, including cumulative risks to 45 years of age for reproductive outcomes and to 55 years of age for other outcomes, and their relationships to the baseline presence or absence of vaginal epithelial changes, which are correlated with a higher dose of, and earlier exposure to, DES in utero. RESULTS: Cumulative risks in women exposed to DES, as compared with those not exposed, were as follows: for infertility, 33.3% vs. 15.5% (hazard ratio, 2.37; 95% confidence interval [CI], 2.05 to 2.75); spontaneous abortion, 50.3% vs. 38.6% (hazard ratio, 1.64; 95% CI, 1.42 to 1.88); preterm delivery, 53.3% vs. 17.8% (hazard ratio, 4.68; 95% CI, 3.74 to 5.86); loss of second-trimester pregnancy, 16.4% vs. 1.7% (hazard ratio, 3.77; 95% CI, 2.56 to 5.54); ectopic pregnancy, 14.6% vs. 2.9% (hazard ratio, 3.72; 95% CI, 2.58 to 5.38); preeclampsia, 26.4% vs. 13.7% (hazard ratio 1.42; 95% CI, 1.07 to 1.89); stillbirth, 8.9% vs. 2.6% (hazard ratio, 2.45; 95% CI, 1.33 to 4.54); early menopause, 5.1% vs. 1.7% (hazard ratio, 2.35; 95% CI, 1.67 to 3.31); grade 2 or higher cervical intraepithelial neoplasia, 6.9% vs. 3.4% (hazard ratio, 2.28; 95% CI, 1.59 to 3.27); and breast cancer at 40 years of age or older, 3.9% vs. 2.2% (hazard ratio, 1.82; 95% CI, 1.04 to 3.18). For most outcomes, the risks among exposed women were higher for those with vaginal epithelial changes than for those without such changes. CONCLUSIONS: In utero exposure of women to DES is associated with a high lifetime risk of a broad spectrum of adverse health outcomes. (Funded by the National Cancer Institute.).


Subject(s)
Breast Neoplasms/chemically induced , Diethylstilbestrol/adverse effects , Estrogens, Non-Steroidal/adverse effects , Genital Neoplasms, Female/chemically induced , Pregnancy Complications/chemically induced , Prenatal Exposure Delayed Effects , Adenocarcinoma, Clear Cell/chemically induced , Female , Follow-Up Studies , Humans , Menopause, Premature , Pregnancy , Stillbirth , Uterine Cervical Dysplasia/chemically induced
6.
Bioorg Med Chem Lett ; 21(21): 6348-52, 2011 Nov 01.
Article in English | MEDLINE | ID: mdl-21955943

ABSTRACT

We describe the design, synthesis and profiling of a novel series of PDE5 inhibitors. We take advantage of an alternate projection into the solvent region to identify compounds with excellent potency, selectivity and pharmacokinetic profiles.


Subject(s)
Phosphodiesterase 5 Inhibitors/pharmacology , Pyrazines/pharmacology , Crystallography, X-Ray , Inhibitory Concentration 50 , Models, Molecular , Phosphodiesterase 5 Inhibitors/chemistry , Phosphodiesterase 5 Inhibitors/pharmacokinetics , Pyrazines/chemistry , Pyrazines/pharmacokinetics , Solvents/chemistry
7.
J Med Chem ; 53(18): 6653-80, 2010 Sep 23.
Article in English | MEDLINE | ID: mdl-20726512

ABSTRACT

α-Sulfone-α-piperidine and α-tetrahydropyranyl hydroxamates were explored that are potent inhibitors of MMP's-2, -9, and -13 that spare MMP-1, with oral efficacy in inhibiting tumor growth in mice and left-ventricular hypertrophy in rats and in the bovine cartilage degradation ex vivo explant system. α-Piperidine 19v (SC-78080/SD-2590) was selected for development toward the initial indication of cancer, while α-piperidine and α-tetrahydropyranyl hydroxamates 19w (SC-77964) and 9i (SC-77774), respectively, were identified as backup compounds.


Subject(s)
Anti-Inflammatory Agents/chemical synthesis , Antineoplastic Agents/chemical synthesis , Cardiovascular Agents/chemical synthesis , Hydroxamic Acids/chemical synthesis , Matrix Metalloproteinase Inhibitors , Piperidines/chemical synthesis , Pyrans/chemical synthesis , Sulfones/chemical synthesis , Animals , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Biological Availability , Cardiovascular Agents/chemistry , Cardiovascular Agents/pharmacology , Cartilage, Articular/drug effects , Cartilage, Articular/pathology , Cattle , Crystallography, X-Ray , Humans , Hydroxamic Acids/chemistry , Hydroxamic Acids/pharmacology , Hypertrophy, Left Ventricular/drug therapy , Macaca fascicularis , Mice , Mice, Nude , Models, Molecular , Molecular Structure , Piperidines/chemistry , Piperidines/pharmacology , Pyrans/chemistry , Pyrans/pharmacology , Rats , Structure-Activity Relationship , Sulfones/chemistry , Sulfones/pharmacology , Xenograft Model Antitumor Assays
8.
Bioorg Med Chem Lett ; 20(10): 3120-4, 2010 May 15.
Article in English | MEDLINE | ID: mdl-20443228

ABSTRACT

1H-Pyrazolo[4,3-d]pyrimidines are a class of potent and selective second generation phosphodiesterase 5 (PDE5) inhibitors. This work explores the potency, selectivity and efficacy of 1-(2-ethoxyethyl)-1H-pyrazolo[4,5-d]pyrimidines as PDE5 inhibitors resulting in the advancement of a clinical candidate.


Subject(s)
Enzyme Inhibitors/chemistry , Phosphodiesterase 5 Inhibitors , Pyrimidines/chemistry , Animals , Cyclic Nucleotide Phosphodiesterases, Type 5/metabolism , Dogs , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/pharmacokinetics , Humans , Microsomes, Liver/metabolism , Pyrimidines/chemical synthesis , Pyrimidines/pharmacokinetics , Structure-Activity Relationship
10.
J Med Chem ; 53(6): 2656-60, 2010 Mar 25.
Article in English | MEDLINE | ID: mdl-20196613

ABSTRACT

We recently described a novel series of aminopyridopyrazinones as PDE5 inhibitors. Efforts toward optimization of this series culminated in the identification of 3-[4-(2-hydroxyethyl)piperazin-1-yl]-7-(6-methoxypyridin-3-yl)-1-(2-propoxyethyl)pyrido[3,4-b]pyrazin-2(1H)-one, which possessed an excellent potency and selectivity profile and demonstrated robust in vivo blood pressure lowering in a spontaneously hypertensive rat (SHR) model. Furthermore, this compound is brain penetrant and will be a useful agent for evaluating the therapeutic potential of central inhibition of PDE5. This compound has recently entered clinical trials.


Subject(s)
Brain/metabolism , Phosphodiesterase 5 Inhibitors , Phosphodiesterase Inhibitors/chemical synthesis , Phosphodiesterase Inhibitors/pharmacology , Pyrazines/chemical synthesis , Pyrazines/pharmacology , Pyridines/chemical synthesis , Pyridines/pharmacology , Administration, Oral , Animals , Biological Availability , Blood Pressure/drug effects , Cyclic Nucleotide Phosphodiesterases, Type 5/metabolism , Dose-Response Relationship, Drug , Drug Design , Humans , Male , Models, Chemical , Molecular Structure , Phosphodiesterase Inhibitors/pharmacokinetics , Pyrazines/pharmacokinetics , Pyridines/pharmacokinetics , Rats , Rats, Inbred SHR , Rats, Sprague-Dawley
11.
Bioorg Med Chem Lett ; 19(17): 5209-13, 2009 Sep 01.
Article in English | MEDLINE | ID: mdl-19631533
12.
Bioorg Med Chem Lett ; 19(15): 4088-91, 2009 Aug 01.
Article in English | MEDLINE | ID: mdl-19540112

ABSTRACT

A new class of potent and selective PDE5 inhibitors is disclosed. Guided by X-ray crystallographic data, optimization of an HTS lead led to the discovery of a series of 2-aryl, (N8)-alkyl substituted-6-aminosubstituted pyrido[3,2b]pyrazinones which show potent inhibition of the PDE5 enzyme. Synthetic details and some structure-activity relationships are also presented.


Subject(s)
Cyclic Nucleotide Phosphodiesterases, Type 5/chemistry , Phosphodiesterase 5 Inhibitors , Pyrazines/chemical synthesis , 3',5'-Cyclic-GMP Phosphodiesterases , Animals , Catalytic Domain , Chemistry, Pharmaceutical/methods , Crystallography, X-Ray/methods , Cyclic Nucleotide Phosphodiesterases, Type 6/antagonists & inhibitors , Cyclic Nucleotide Phosphodiesterases, Type 6/chemistry , Drug Design , Humans , Hydrogen-Ion Concentration , Inhibitory Concentration 50 , Phosphodiesterase Inhibitors/chemical synthesis , Phosphodiesterase Inhibitors/pharmacology , Phosphoric Diester Hydrolases/chemistry , Protein Structure, Tertiary , Pyrazines/pharmacology , Rats , Structure-Activity Relationship
13.
Bioorg Med Chem Lett ; 19(15): 4092-6, 2009 Aug 01.
Article in English | MEDLINE | ID: mdl-19539468

ABSTRACT

Efforts to improve the potency and physical properties of the aminopyridiopyrazinone class of PDE5 inhibitors through modification of the core ring system are described. Five new ring systems are evaluated and features that impart improved potency and improved solubility are delineated.


Subject(s)
Aminopyridines/chemical synthesis , Phosphodiesterase 5 Inhibitors , Phosphodiesterase Inhibitors/chemical synthesis , Pyrazines/chemical synthesis , Administration, Oral , Aminopyridines/pharmacology , Animals , Chemistry, Pharmaceutical/methods , Cyclic GMP/chemistry , Cyclic Nucleotide Phosphodiesterases, Type 5/chemistry , Drug Design , Humans , Hydrogen-Ion Concentration , Hypertension/drug therapy , Microsomes/drug effects , Models, Chemical , Phosphodiesterase Inhibitors/pharmacology , Pyrazines/pharmacology , Rats , Rats, Sprague-Dawley , Solubility
14.
J Pharmacol Exp Ther ; 330(1): 191-7, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19349522

ABSTRACT

In humans and rats, a synergistic blood pressure reduction was observed when the fibrate gemcabene (CI-1027) was coadministered with the angiotensin-converting enzyme inhibitor quinapril. In a quinapril (3 mg/kg) pharmacokinetic rat study, there was a 40% decrease in urinary excretion and a 53% increase in plasma area under the curve from 0 to 24 h of the active metabolite quinaprilat when coadministered with gemcabene (30 mg/kg). This observation revealed a possible transporter-mediated drug-drug interaction (DDI) between gemcabene and quinapril. This led to a series of studies investigating the underlying clearance mechanisms associated with these compounds intended to elucidate renal transporter interactions between quinapril and gemcabene. In vitro transporter studies using human embryonic kidney 293 cells transfected with human or rat organic anion transporter 3 (hOAT3, rOat3) revealed that quinaprilat is a substrate in both species, with a K(m) value of 13.4 microM for hOAT3. Subsequent studies discovered that gemcabene inhibited quinaprilat uptake by hOAT3 and rOat3 at IC(50) values of 35 and 48 microM, respectively. Moreover, gemcabene acylglucuronide, the major metabolite of gemcabene glucuronidation, also inhibited hOAT3- and rOat3-mediated uptake of quinaprilat at IC(50) values of 197 and 133 microM, respectively. High plasma concentrations of gemcabene (>100 microM) achieved in humans and rats upon oral dosing corroborate with gemcabene inhibition of renal OAT3-mediated secretion of quinaprilat in vitro. This investigation established that a DDI between gemcabene and quinapril involving inhibition of renal transporters and subsequent elevation in plasma concentrations of quinaprilat is responsible for the apparent synergistic blood pressure reduction observed with these compounds.


Subject(s)
Caproates/metabolism , Kidney/metabolism , Organic Anion Transporters/physiology , Tetrahydroisoquinolines/metabolism , Animals , Caproates/blood , Caproates/pharmacokinetics , Cell Line , Drug Interactions/physiology , Drug Therapy, Combination , Humans , Male , Organic Anion Transporters/antagonists & inhibitors , Organic Anion Transporters/metabolism , Organic Anion Transporters, Sodium-Independent/antagonists & inhibitors , Organic Anion Transporters, Sodium-Independent/metabolism , Organic Anion Transporters, Sodium-Independent/physiology , Quinapril , Rats , Rats, Inbred SHR , Tetrahydroisoquinolines/blood , Tetrahydroisoquinolines/pharmacokinetics
15.
Clin Gastroenterol Hepatol ; 7(1): 73-9, 2009 Jan.
Article in English | MEDLINE | ID: mdl-19124114

ABSTRACT

BACKGROUND & AIMS: Although irritable bowel syndrome (IBS) can be defined using few symptoms, principal symptoms alone may be inadequate in monitoring disorder severity. Secondary analysis of a published data set was performed to determine if more inclusive symptom measures would better reflect the burden of this disorder. METHODS: From a prospective naturalistic study of 213 patients meeting Rome II criteria, all the data were used from daily questionnaires recorded for 4 weeks, and repeated again after an interval of 4 weeks. The total number of 11 symptoms and intensity grading score of each symptom were analyzed alongside individual symptom intensities by principal component analysis. RESULTS: The trend accounting for the most variance was explained by the intensity of all symptoms together. The second largest trend was explained by differences between IBS bowel habits (constipation and diarrhea). The 2 constipation and 4 diarrhea symptoms closely correlated within each group, but the category of other symptoms were not correlated directly with either, and represent a separate dimension. Other symptoms (pain/discomfort, abdominal uneasiness, flatulence/distension, incomplete evacuation, pain or burning in the stomach) correlated more highly with disease intensity than either constipation or diarrhea symptoms. The sum of all symptoms and their intensity was consistent over each week, although the relative intensity of individual symptoms was more variable. Investigator measures of disease intensity underestimated that reported by patients. CONCLUSIONS: Non-bowel habit symptoms include more than abdominal pain and discomfort, and contribute to the largest component of the total symptom burden. Thus, more than bowel habits and abdominal pain drive IBS symptom severity.


Subject(s)
Irritable Bowel Syndrome/epidemiology , Irritable Bowel Syndrome/physiopathology , Abdominal Pain/epidemiology , Constipation/epidemiology , Diarrhea/epidemiology , Flatulence/epidemiology , Humans , Principal Component Analysis , Severity of Illness Index
16.
Biochem Biophys Res Commun ; 334(4): 1085-91, 2005 Sep 09.
Article in English | MEDLINE | ID: mdl-16039993

ABSTRACT

Non-receptor proline-rich tyrosine kinase-2 (PYK2), which is activated by phosphorylation of one or more of its tyrosine residues, has been implicated in the regulation of GLUT4 glucose transporter translocation and glucose transport. Some data favor a positive role of PYK2 in stimulating glucose transport, whereas other studies suggest that PYK2 may participate in the induction of insulin resistance. To ascertain the importance of PYK2 in the setting of obesity and insulin resistance, we (1) evaluated the regulation of PYK2 in mice fed a high-fat diet and (2) characterized body and glucose homeostasis in wild type (WT) and PYK2(-/-) mice on different diets. We found that both PYK2 expression and phosphorylation were significantly increased in liver and adipose tissues harvested from high-fat diet fed mice. Wild type and PYK2(-/-) mice were fed a high-fat diet for 8 weeks to induce insulin resistance/obesity. Surprisingly, in response to this diet PYK2(-/-) mice gained significantly more weight than WT mice (18.7+/-1.2g vs. 9.5+/-0.6g). Fasting serum leptin and insulin and blood glucose levels were significantly increased in high-fat diet fed mice irrespective of the presence of PYK2 protein. There was a close correlation between serum leptin and body weight. Intraperitoneal glucose tolerance tests revealed that as expected, the high-fat diet resulted in increased blood glucose levels following glucose administration in wild type mice compared to those fed normal chow. An even greater increase in blood glucose levels was observed in PYK2(-/-) mice compared to wild type mice. These results demonstrate that a lack of PYK2 exacerbates weight gain and development of glucose intolerance/insulin resistance induced by a high-fat diet, suggesting that PYK2 may play a role in slowing the development of obesity, insulin resistance, and/or frank diabetes.


Subject(s)
Dietary Fats/metabolism , Glucose/metabolism , Insulin Resistance , Obesity/metabolism , Protein-Tyrosine Kinases/metabolism , Animals , Body Weight , Focal Adhesion Kinase 2 , Male , Mice , Mice, Inbred C57BL , Organ Specificity , Phosphorylation , Protein-Tyrosine Kinases/deficiency , Tissue Distribution
17.
DNA Cell Biol ; 24(7): 410-31, 2005 Jul.
Article in English | MEDLINE | ID: mdl-16008510

ABSTRACT

Administration of endotoxin (LPS) in humans results in profound physiological responses, including activation of peripheral blood mononuclear cells and the release of inflammatory factors. The time course of the response of selected inflammatory proteins was examined in healthy subjects (n = 6) administered a single intravenous dose of the purified derivative of endotoxin (3.0 ng/kg). Microarray analysis demonstrated changes in the expression of a number of genes, which were confirmed in separate in vitro endotoxin stimulation experiments. Subsequent TaqMan analysis of genes of interest indicated time-dependent changes in the expression of many of these genes. This included pre-B cell enhancing factor, which was identified on microarray analysis as being markedly upregulated following endotoxin stimulation. Protein expression of the genes examined by TaqMan analysis was measured and demonstrated the appearance of tumor necrosis factor (TNF)-alpha and sTNF-R proteins in the plasma beginning within 1 h after dosing, followed by other cytokines/ inflammatory markers (e.g., IL-1ra, G-CSF, IL-6, IL-8, and IL-10) and suppressors of cytokine signaling (SOCS-1 and SOCS-3). In general, cytokine protein expression correlated well with gene expression; however, the temporal profile of expression of some genes did not correlate well with the protein data. For many of these proteins, the lack of correlation was attributable to alternate tissue sources, which were demonstrated on TaqMan analysis. Principal component analysis indicated that cytokines could be grouped according to their temporal pattern of response, with most transcript levels returning to baseline 24 h following endotoxin administration. The combination of cDNA microarray and TaqMan analysis to identify and quantify changes in gene expression, along with the analysis of protein expression, can be useful in investigating inflammatory and other diseases.


Subject(s)
Cytokines/metabolism , Endotoxins/administration & dosage , Gene Expression Profiling , Gene Expression Regulation/drug effects , Proteins/analysis , Adolescent , Adult , Endotoxins/pharmacology , Granulocyte Colony-Stimulating Factor/metabolism , Humans , Inflammation/pathology , Injections, Intravenous , Interleukin-1/metabolism , Interleukin-10/metabolism , Interleukin-6/metabolism , Interleukin-8/metabolism , Kinetics , Male , Microarray Analysis , Nicotinamide Phosphoribosyltransferase , Polymerase Chain Reaction , Proteins/metabolism , RNA, Messenger/analysis , RNA, Messenger/metabolism , Tumor Necrosis Factor-alpha/metabolism , Up-Regulation
18.
Methods Mol Med ; 104: 265-84, 2005.
Article in English | MEDLINE | ID: mdl-15454673

ABSTRACT

Many researchers have sought to study changes in gene expression in preclinical models of stroke. These range from in vitro models of ischemia, neuronal death, and regeneration to in vivo animal models aimed at replicating pathologies and regenerative processes typical of the clinical situation. In all such models, changes in gene expression occur, which may be assessed by measuring the abundance of the mRNA transcribed from particular genes of interest. The advent of real-time reverse-transcriptase polymerase chain reaction (RT-PCR) has vastly improved the sensitivity and accuracy of mRNA detection and is now the method of choice in many studies. Although this is a relatively simple and rapid technique, it has a number of pitfalls, especially in experimental design and data analysis. In this chapter we describe a detailed experimental protocol for real-time RT-PCR detection of mRNA transcripts, as used in the rat permanent middle cerebral artery occlusion model. We also discuss methods for analysis and interpretation of the resulting data.


Subject(s)
Reverse Transcriptase Polymerase Chain Reaction/methods , Stroke/genetics , Animals , DNA, Complementary/genetics , Data Interpretation, Statistical , Disease Models, Animal , Gene Expression , Genes, Reporter , Infarction, Middle Cerebral Artery/genetics , RNA, Messenger/genetics , Rats , Reference Standards , Reverse Transcriptase Polymerase Chain Reaction/standards , Reverse Transcriptase Polymerase Chain Reaction/statistics & numerical data , Transcription, Genetic
19.
Circ Res ; 93(1): 69-76, 2003 Jul 11.
Article in English | MEDLINE | ID: mdl-12791709

ABSTRACT

Aldosterone classically promotes unidirectional transepithelial sodium transport, thereby regulating blood volume and blood pressure. Recently, both clinical and experimental studies have suggested additional, direct roles for aldosterone in the cardiovascular system. To evaluate aldosterone activation of cardiomyocyte mineralocorticoid receptors, transgenic mice overexpressing 11beta-hydroxysteroid dehydrogenase type 2 in cardiomyocytes were generated using the mouse alpha-myosin heavy chain promoter. This enzyme converts glucocorticoids to receptor-inactive metabolites, allowing aldosterone occupancy of cardiomyocyte mineralocorticoid receptors. Transgenic mice were normotensive but spontaneously developed cardiac hypertrophy, fibrosis, and heart failure and died prematurely on a normal salt diet. Eplerenone, a selective aldosterone blocker, ameliorated this phenotype. These studies confirm the deleterious consequences of inappropriate activation of cardiomyocyte mineralocorticoid receptors by aldosterone and reveal a tonic inhibitory role of glucocorticoids in preventing such outcomes under physiological conditions. In addition, these data support the hypothesis that aldosterone blockade may provide additional therapeutic benefit in the treatment of heart failure.


Subject(s)
Aldosterone/physiology , Cardiomegaly/physiopathology , Heart Failure/physiopathology , Hydroxysteroid Dehydrogenases/genetics , Spironolactone/analogs & derivatives , 11-beta-Hydroxysteroid Dehydrogenase Type 2 , Animals , Blood Pressure/drug effects , Blood Pressure/physiology , Cardiomegaly/genetics , Disease Models, Animal , Echocardiography , Eplerenone , Female , Fibrosis/genetics , Fibrosis/physiopathology , Gene Expression Regulation/drug effects , Gene Expression Regulation, Enzymologic/drug effects , Heart Failure/genetics , Hydroxysteroid Dehydrogenases/metabolism , Kidney/metabolism , Kidney/pathology , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Mineralocorticoid Receptor Antagonists , Myocardium/metabolism , Myocardium/pathology , Myocytes, Cardiac/metabolism , Myocytes, Cardiac/pathology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Spironolactone/pharmacology , Up-Regulation , Ventricular Dysfunction, Left/physiopathology , Ventricular Dysfunction, Left/prevention & control
20.
Brain Res Mol Brain Res ; 106(1-2): 101-16, 2002 Oct 15.
Article in English | MEDLINE | ID: mdl-12393270

ABSTRACT

Expression levels of mRNA are commonly measured as a ratio of test to reference gene. The assumption is that reference genes such as beta-actin or cyclophilin are unaffected by treatment and act as steady-state controls. TaqMan real-time RT-PCR was used to test these assumptions in a rat model of cerebral ischaemia (tMCAO). Following measurement of 24 genes, we show that reference genes in this animal model fail the criteria for steady-state controls. Neuronal loss, glial proliferation and an influx of leukocytes into the lesioned brain result in major disturbance to cell populations. The mRNA for reference genes, as for test genes, reflects these changes. Specific mRNA levels vary according to the choice of reference gene to which they are normalised. In the process of resolving reference gene issues, mRNA increases were discovered for leukaemia inhibitory factor, nestin and galanin in rat brain hemispheres affected by ischaemia. Results are reported for a further 21 genes and mathematical and statistical methods are described that allow in this study fraction-fold changes in mRNA to be detected.


Subject(s)
Brain Ischemia/genetics , Gene Expression Regulation , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Animals , Data Interpretation, Statistical , Disease Models, Animal , Infarction, Middle Cerebral Artery , Male , RNA, Messenger/genetics , Rats , Rats, Sprague-Dawley , Reference Standards , Reverse Transcriptase Polymerase Chain Reaction/standards
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