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1.
Methods Mol Biol ; 2182: 7-16, 2021.
Article in English | MEDLINE | ID: mdl-32894482

ABSTRACT

The isolation of Salmonella from feed is challenging and adjustments need to be made in order to accurately isolate the pathogen from feed. This is due to the complex nature of the feed matrix, which is both porous and fibrous. The outlined method below contains the essential components of a successful Salmonella methodology for the analysis of feed that overcomes the limitations of currently available methods.


Subject(s)
Animal Feed/microbiology , Salmonella/isolation & purification , Animals , Food Microbiology/methods
2.
IEEE Trans Biomed Eng ; 58(3): 773-6, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21292590

ABSTRACT

In North America, an estimated 30,000 patients annually experience an aneurysmal subarachnoid hemorrhage (SAH). In approximately five percent of these patients, the hemorrhage is not visible on computerized tomography scans due to the inability to image blood at time intervals greater than 12 h post symptom onset. For these patients (many of which have experienced a sentinel hemorrhage that is a precursor to a more significant rupture), a method is needed for accurately analyzing cerebral spinal fluid (CSF) for evidence of SAH. Further, it is necessary to differentiate blood associated with the SAH from blood associated with the spinal tap procedure. This letter presents a point-of-care device that is capable of performing such an analysis. The stand-alone prototype device uses commercially available embedded system components to implement a point-of-care device that is capable of collecting and analyzing optical absorbance spectra. A mathematical model for the hemorrhagic CSF sample is then developed by using a partial-least-squares-regression-based regression methodology that is able to differentiate between SAH and blood associated with the spinal tap. This differentiation is achieved by quantifying bilirubin (associated with the breakdown of old blood) in the CSF. Initial testing on the prototype device suggests that the device is able to quantify bilirubin in the presence of hemoglobin over concentrations ranges that are clinically relevant to the patient population of interest.


Subject(s)
Bilirubin/cerebrospinal fluid , Point-of-Care Systems , Spectrum Analysis/instrumentation , Subarachnoid Hemorrhage/cerebrospinal fluid , Algorithms , Hemoglobins/cerebrospinal fluid , Humans , Least-Squares Analysis , Models, Biological , Spinal Puncture
3.
Article in English | MEDLINE | ID: mdl-22254236

ABSTRACT

Subarachnoid hemorrhage (SAH) is a dangerous neurological event with a very short time window for early diagnosis. Clinical diagnoses performed in a lab seek to quantify bilirubin in cerebrospinal fluid (CSF) as a biomarker for SAHs; however laboratory assays suffer from lengthy protocols, interference from hemoglobin, and the availability of expertise. Substantial improvements in the determination of bilirubin concentration in the presence of hemoglobin in CSF are demonstrated in this work. Concentration estimates within 15% for bilirubin in the range of 0.2 to 1.6 mg /dl were determined for CSF samples containing fresh hemoglobin concentrations ranging from 0.05 to 0.25 g/dl. To demonstrate extensibility of the system with respect to more complete mock SAH samples, sample sets with one additional species of both hemoglobin and bilirubin, methemoglobin and alpha-bilirubin, respectively, were tested and yielded results within 25% of actual values, as measured by standard chemical assays of preparations prior to mixing.


Subject(s)
Algorithms , Artifacts , Bilirubin/cerebrospinal fluid , Data Interpretation, Statistical , Hemoglobins/cerebrospinal fluid , Spectrophotometry, Ultraviolet/methods , Complex Mixtures/cerebrospinal fluid , Humans , Least-Squares Analysis , Reproducibility of Results , Sensitivity and Specificity , Spectrophotometry, Ultraviolet/instrumentation
4.
Article in English | MEDLINE | ID: mdl-21096772

ABSTRACT

In North America, an estimated 30,000 patients annually experience an aneurysmal subarachnoid hemorrhage (SAH). In approximately five percent of these patients, the hemorrhage is not visible on computerized tomography scans due to the inability to image blood at time intervals greater than 12 hours post symptom onset. For these patients (many of which have experience a sentinel hemorrhage that is a precursor to a more significant rupture) a method is needed for accurately analyzing cerebral spinal fluid (CSF) for evidence of SAH. Further, it is necessary to differentiate blood associated with the SAH from blood associated with the spinal tap procedure. This paper presents the development of a point-of-care device that is capable of performing such an analysis. The stand alone prototype device uses commercially available embedded system components to implement a hardware platform that is capable of collecting and analyzing optical absorbance spectra. A mathematical model for the hemorrhagic CSF sample is then developed using a PLSR based regression methodology that is able to differentiate between SAH and blood associated with the spinal tap. This differentiations in achieved by quantifying bilirubin (associated with the breakdown of old blood) in the CSF. Initial testing on the prototype device suggests that the device is able to quantify bilirubin in the presence of hemoglobin over concentrations ranges that are clinically relevant to the patient population of interest.


Subject(s)
Bilirubin/cerebrospinal fluid , Biosensing Techniques/instrumentation , Point-of-Care Systems , Subarachnoid Hemorrhage/cerebrospinal fluid , Subarachnoid Hemorrhage/diagnosis , Biomarkers/cerebrospinal fluid , Equipment Design , Equipment Failure Analysis , Humans , Reproducibility of Results , Sensitivity and Specificity
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