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1.
Dev Comp Immunol ; 114: 103866, 2021 01.
Article in English | MEDLINE | ID: mdl-32937163

ABSTRACT

A candidate antimicrobial peptide (AmAMP1) was identified by searching the whole genome sequence of Acropora millepora for short (<125AA) cysteine-rich predicted proteins with an N-terminal signal peptide but lacking clear homologs in the SwissProt database. It resembled but was not closely related to damicornin, the only other known AMP from a coral, and was shown to be active against both Gram-negative and Gram-positive bacteria. These proteins define a family of AMPs present in corals and their close relatives, the Corallimorpharia, and are synthesised as preproproteins in which the C-terminal mature peptide contains a conserved arrangement of six cysteine residues. Consistent with the idea of a common origin for AMPs and toxins, this Cys motif is shared between the coral AMPs and the Shk neurotoxins of sea anemones. AmAMP1 is expressed at late stages of coral development, in ectodermal cells that resemble the "ganglion neurons" of Hydra, in which it has recently been demonstrated that a distinct AMP known as NDA-1 is expressed.


Subject(s)
Anthozoa/immunology , Antimicrobial Peptides/genetics , Cnidaria/immunology , Cnidarian Venoms/genetics , Ectoderm/metabolism , Sea Anemones/immunology , Animals , Antimicrobial Peptides/metabolism , Conserved Sequence , Cysteine/genetics , Phylogeny , Species Specificity , Structural Homology, Protein
2.
West Indian med. j ; 69(4): 185-190, 2021. tab
Article in English | LILACS-Express | LILACS | ID: biblio-1515640

ABSTRACT

ABSTRACT Objective: To determine whether or not Jamaican coaches' knowledge and practices of fluid replacement are on par with that of the National Athletic Association's and the American College of Sports Medicine Standards. Methods: A descriptive survey of 90 high-school track and field coaches in Jamaica was conducted. Coaches were given a 29-item survey questionnaire which adapted the content from previous surveys and also based on the National Athletic Trainers' Association guidelines for fluid replacement and information sources of fluid replacement. A pass score of 80% was employed. Results: Approximately 26.6% of participants passed the knowledge-based assessment with the minimum requirement of 80% and 73.4% of participants had an unacceptable level of knowledge about fluid replacement and hydration. Only 26 (28.9%) coaches received training in fluid replacement therapy. Most of them therefore relied on reading materials ranging from magazines to journals, or learnt it on the job from other coaches. Conclusion: Findings suggest that the level of knowledge in Jamaican track and field high-school coaches about fluid replacement and hydration is very poor. However, their attitudes towards fluid replacement and hydration are very good, and this will facilitate their acceptance and adoption of correct fluid replacement guidelines. Tapping into this positive attitude and implementing workshops, seminars and onsite promotion should improve the coaches' knowledge significantly.

3.
Eye (Lond) ; 31(2): 179-184, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27983731

ABSTRACT

Blindness afflicts ~39 million people worldwide. Retinal ganglion cells are unable to regenerate, making this condition irreversible in many cases. Whole-eye transplantation (WET) provides the opportunity to replace diseased retinal ganglion cells, as well as the entire optical system and surrounding facial tissue, if necessary. Recent success in face transplantation demonstrates that this may be a promising treatment for what has been to this time an incurable condition. An animal model for WET must be established to further enhance our knowledge of nerve regeneration, immunosuppression, and technical aspects of surgery. A systematic review of the literature was performed to evaluate studies describing animal models for WET. Only articles in which the eye was completely enucleated and reimplanted were included. Study methods and results were compared. In the majority of published literature, WET can result in recovery of vision in cold-blooded vertebrates. There are a few instances in which mammalian WET models demonstrate survival of the transplanted tissue following neurovascular anastomosis and the ability to maintain brief electroretinogram activity in the new host. In this study we review in cold-blooded vertebrates and mammalian animal models for WET and discuss prospects for future research for translation to human eye transplantation.


Subject(s)
Blindness/rehabilitation , Eye/transplantation , Optic Nerve Injuries/complications , Retina/physiology , Animals , Disease Models, Animal , Eye/physiopathology , Optic Nerve Injuries/physiopathology , Organ Transplantation/methods , Organ Transplantation/trends , Tissue Survival/physiology
4.
Mol Ecol ; 25(13): 3127-41, 2016 07.
Article in English | MEDLINE | ID: mdl-27094992

ABSTRACT

Despite the ecological significance of the relationship between reef-building corals and intracellular photosynthetic dinoflagellates of the genus Symbiodinium, very little is known about the molecular mechanisms involved in its establishment. Indeed, microarray-based analyses point to the conclusion that host gene expression is largely or completely unresponsive during the establishment of symbiosis with a competent strain of Symbiodinium. In this study, the use of Illumina RNA-Seq technology allowed detection of a transient period of differential expression involving a small number of genes (1073 transcripts; <3% of the transcriptome) 4 h after the exposure of Acropora digitifera planulae to a competent strain of Symbiodinium (a clade B strain). This phenomenon has not previously been detected as a consequence of both the lower sensitivity of the microarray approaches used and the sampling times used. The results indicate that complex changes occur, including transient suppression of mitochondrial metabolism and protein synthesis, but are also consistent with the hypothesis that the symbiosome is a phagosome that has undergone early arrest, raising the possibility of common mechanisms in the symbiotic interactions of corals and symbiotic sea anemones with their endosymbionts.


Subject(s)
Anthozoa/genetics , Dinoflagellida/physiology , Phagosomes/genetics , Symbiosis/genetics , Transcriptome , Animals , High-Throughput Nucleotide Sequencing , Sequence Analysis, RNA
5.
J Vet Pharmacol Ther ; 39(3): 224-36, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26440900

ABSTRACT

Cisplatin is a platinum-containing cytotoxic drug indicated for the treatment of solid tumors in veterinary and human patients. Several of the algorithms used to standardize the doses of cytotoxic drugs utilize allometry, or the nonproportional relationships between anatomical and physiological variables, but the underlying basis for these relationships is poorly understood. The objective of this proof of concept study was to determine whether allometric equations explain the relationships between body weight, kidney weight, renal physiology, and clearance of a model, renally cleared anticancer agent in dogs. Postmortem body, kidney, and heart weights were collected from 364 dogs (127 juveniles and 237 adults, including 51 dogs ≥ 8 years of age). Renal physiological and cisplatin pharmacokinetic studies were conducted in ten intact male dogs including two juvenile and eight adult dogs (4-55 kg). Glomerular filtration rate (GFR), effective renal plasma flow, effective renal blood flow, renal cisplatin clearance, and total cisplatin clearance were allometrically related to body weight with powers of 0.75, 0.59, 0.61, 0.71, and 0.70, respectively. The similar values of these diverse mass exponents suggest a common underlying basis for the allometry of kidney size, renal physiology, and renal drug handling.


Subject(s)
Antineoplastic Agents/pharmacokinetics , Body Weight , Cisplatin/pharmacokinetics , Dogs/metabolism , Kidney , Aging , Animals , Female , Kidney/anatomy & histology , Kidney/metabolism , Kidney/physiology , Male , Metabolic Clearance Rate , Organ Size , Renal Circulation/physiology , Reproducibility of Results
6.
J Nanopart Res ; 13(6): 2609-2623, 2011 Jun 01.
Article in English | MEDLINE | ID: mdl-21779150

ABSTRACT

3,5-Bis(2-fluorobenzylidene)-4-piperidone (EF24) is an anti-proliferative diphenyldifluoroketone analog of curcumin with more potent activity. The authors describe a liposome preparation of EF24 using a "drug-in-CD-in liposome" approach. An aqueous solution of EF24 and hydroxypropyl-ß-cyclodextrin (HPßCD) inclusion complex (IC) was used to prepare EF24 liposomes. The liposome size was reduced by a combination of multiple freeze-thaw cycles. Co-encapsulation of glutathione inside the liposomes conferred them with the capability of labeling with imageable radionuclide Tc-99m. Phase solubility analysis of EF24-HPßCD mixture provided k(1:1) value of 9.9 M(-1). The enhanced aqueous solubility of EF24 (from 1.64 to 13.8 mg/mL) due to the presence of HPßCD helped in the liposome preparation. About 19% of the EF24 IC was encapsulated inside the liposomes (320.5 ± 2.6 nm) by dehydration-rehydration technique. With extrusion technique, the size of 177 ± 6.5 nm was obtained without any effect on encapsulation efficiency. The EF24-liposomes were evaluated for anti-proliferative activity in lung adenocarcinoma H441 and prostate cancer PC-3 cells. The EF24-liposomes demonstrated anti-proliferative activity superior to that of plain EF24 at 10 µM dose. When injected in rats, the Tc-99m-labeled EF24-liposomes cleared from blood with an α-t(1/2) of 21.4 min and ß-t(1/2) of 397 min. Tissue radioactivity counting upon necropsy showed that the majority of clearance was due to the uptake in liver and spleen. The results suggest that using "drug-in-CD-in liposome" approach is a feasible strategy to formulate an effective parenteral preparation of EF24. In vitro studies show that the liposomal EF24 remains anti-proliferative, while presenting an opportunity to image its biodistribution.

7.
Dalton Trans ; 40(34): 8675-84, 2011 Sep 14.
Article in English | MEDLINE | ID: mdl-21796325

ABSTRACT

The synthesis and characterisation of four 17-membered, dibenzo-substituted macrocyclic ligands incorporating unsymmetrical arrangements of their N(3)S(2), N(3)O(2) and N(3)OS (two ligands) donor atoms are described; these rings complete the matrix of related macrocyclic systems incorporating both symmetric and unsymmetric donor sets reported previously. The X-ray structures of three of the new macrocycles are reported. In two of the Cu(II) structures only three of the possible five donor atoms present in the corresponding macrocyclic ligand bind to the Cu(II) site, whereas all five donors are coordinated in each of the remaining complexes. The interaction of Co(II), Ni(II) and Cu(II) with the unsymmetric macrocycle series has been investigated by potentiometric (pH) titration in 95% methanol; X-ray structures of two nickel and three copper complexes of these ligands, each exhibiting 1:1 (M:L) ratios, have been obtained. The results are discussed in the context of previous results for these metals with the analogous 17-membered ring systems incorporating symmetrical arrangements of their donor atoms, with emphasis being given to both the influence of the donor atom set, as well as the donor atom sequence, on the nature of the resulting complexes.


Subject(s)
Cobalt/chemistry , Copper/chemistry , Macrocyclic Compounds/chemistry , Nickel/chemistry , Ligands , Nitrogen/chemistry , Organic Chemistry Phenomena , Oxygen/chemistry , Sulfur/chemistry
8.
Prenat Diagn ; 30(5): 418-24, 2010 May.
Article in English | MEDLINE | ID: mdl-20306459

ABSTRACT

OBJECTIVE: To develop a standardized blood collection device that preserves fetal cell-free DNA and minimizes the cell-free DNA background in maternal plasma. METHODS: Blood samples were drawn from healthy pregnant donors into K(3)EDTA (BD vacutainer) and Cell-free DNA BCT tubes (Streck, Inc.) and kept at ambient temperature. Plasma was separated by centrifugation and cell-free DNA was extracted. Cell-free DNA from plasma was quantified by quantitative real-time polymerase chain reaction. RESULTS: Blood drawn into Cell-free DNA BCT tubes showed no change in the original proportion of fetal cell-free DNA during a 14-day storage period at ambient temperature. Conversely, maternal blood drawn into K(3)EDTA tubes showed a steady reduction in the original proportion of fetal cell-free DNA over the same time period. Using maternal plasma stored in Cell-free DNA BCT tubes for 14 days, fetal cell-free DNA was amplified 80-fold using whole genome amplification (WGA). CONCLUSION: Using Streck's Cell-free DNA BCT tubes, it is possible to preserve the original proportion of fetal cell-free DNA for extended times as well as minimize the post-sampling maternal cell-free DNA background. Preserved in this way, fetal cell-free DNA can be amplified by WGA technology to be used in prenatal diagnostic tests.


Subject(s)
Blood Specimen Collection/methods , Chromosomes, Human, Y/genetics , DNA/blood , Maternal-Fetal Exchange/genetics , Blood Specimen Collection/standards , Case-Control Studies , Female , Humans , Polymerase Chain Reaction , Pregnancy , Pregnancy Trimester, First/genetics
9.
J Appl Microbiol ; 108(5): 1744-50, 2010 May.
Article in English | MEDLINE | ID: mdl-19886890

ABSTRACT

AIMS: The isolation of lytic bacteriophage of Vibrio harveyi with potential for phage therapy of bacterial pathogens of phyllosoma larvae from the tropical rock lobster Panulirus ornatus. METHODS AND RESULTS: Water samples from discharge channels and grow-out ponds of a prawn farm in northeastern Australia were enriched for 24 h in a broth containing four V. harveyi strains. The bacteriophage-enriched filtrates were spotted onto bacterial lawns demonstrating that the bacteriophage host range for the samples included strains of V. harveyi, Vibrio campbellii, Vibrio rotiferianus, Vibrio parahaemolyticus and Vibrio proteolyticus. Bacteriophage were isolated from eight enriched samples through triple plaque purification. The host range of purified phage included V. harveyi, V. campbellii, V. rotiferianus and V. parahaemolyticus. Transmission electron microscope examination revealed that six purified phage belonged to the family Siphoviridae, whilst two belonged to the family Myoviridae. The Myoviridae appeared to induce bacteriocin production in a limited number of host bacterial strains, suggesting that they were lysogenic rather than lytic. A purified Siphoviridae phage could delay the entry of a broth culture of V. harveyi strain 12 into exponential growth, but could not prevent the overall growth of the bacterial strain. CONCLUSIONS: Bacteriophage with lytic activity against V. harveyi were isolated from prawn farm samples. Purified phage of the family Siphoviridae had a clear lytic ability and no apparent transducing properties, indicating they are appropriate for phage therapy. Phage resistance is potentially a major constraint to the use of phage therapy in aquaculture as bacteria are not completely eliminated. SIGNIFICANCE AND IMPACT OF THE STUDY: Phage therapy is emerging as a potential antibacterial agent that can be used to control pathogenic bacteria in aquaculture systems. The development of phage therapy for aquaculture requires initial isolation and determination of the bacteriophage host range, with subsequent creation of suitable phage cocktails.


Subject(s)
Bacteriophages/physiology , Vibrio/virology , Animals , Aquaculture , Australia , Bacteriophages/isolation & purification , Bacteriophages/ultrastructure , Host Specificity , Myoviridae/physiology , Myoviridae/ultrastructure
10.
Proc Inst Mech Eng H ; 223(3): 349-61, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19405440

ABSTRACT

Digitizing bony landmarks is a common technique used to measure scapular position, but it has not been validated against a gold standard. The aim of this study was to determine the accuracy of this technique for four physiological arm movements using optoelectronic markers mounted on scapular bone pins as a gold standard. Eight subjects had bone pins inserted into their lateral scapular spine. Three points were digitized on the scapula with an optoelectronic probe: the medial root of the scapular spine, the posterolateral corner of the acromion, and the inferior angle of the scapula. The four active movements tested in this study were glenohumeral abduction, glenohumeral horizontal adduction, hand behind back, and forward reaching. The three bony landmarks were digitized six times in three different positions for each movement. Data from one subject were rejected secondary to pin loosening. The overall position-specific r.m.s. errors ranged from 2.0 degrees to 12.5 degrees. The full abduction position had considerably higher r.m.s. errors than the other positions (posterior tipping, 12.5 degrees; upward rotation, 7.3 degrees; internal rotation, 12.0 degrees). It appears that the digitization of bony landmarks may be a valid method for measuring changes in scapular attitude with the following caveats: the full abduction position has a high r.m.s. error, and small scapular motions have high percentage errors.


Subject(s)
Image Interpretation, Computer-Assisted/instrumentation , Image Interpretation, Computer-Assisted/methods , Photography/instrumentation , Photography/methods , Posture/physiology , Scapula/anatomy & histology , Scapula/physiology , Signal Processing, Computer-Assisted , Adult , Female , Humans , Male , Reproducibility of Results , Sensitivity and Specificity
11.
Dis Aquat Organ ; 81(3): 255-9, 2008 Sep 24.
Article in English | MEDLINE | ID: mdl-18998590

ABSTRACT

Previously undetected earlier phases of the coral disease 'atramentous necrosis' are documented and described. New observations relating to the occurrence of initial stages and progression of the disease are reported, and potential cause(s) are examined. In direct contrast to earlier published findings, temperature data indicated that occurrence of early bleached stages of atramentous necrosis is not correlated with warmer water temperatures; however, the relationship between temperature and disease prevalence is still unclear.


Subject(s)
Anthozoa/microbiology , Anthozoa/physiology , Bacteria/growth & development , Animals , Bacteria/isolation & purification , Pacific Ocean , Seawater , Temperature , Time Factors
12.
J Vet Pharmacol Ther ; 31(4): 312-20, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18638291

ABSTRACT

Recent outbreaks of equine herpes virus type-1 infections have stimulated renewed interest in the use of effective antiherpetic drugs in horses. The purpose of this study was to investigate the pharmacokinetics of valacyclovir (VCV), the prodrug of acyclovir (ACV), in horses. Six adult horses were used in a randomized cross-over design. Treatments consisted of 10 mg/kg ACV infused intravenously, 5 g (7.7-11.7 mg/kg) VCV delivered intragastrically (IG) and 15 g (22.7-34.1 mg/kg) VCV administered IG. Serum samples were obtained at predetermined times for acyclovir assay using high-performance liquid chromatography. Following the administration of 5 g VCV, the mean observed maximum serum ACV concentration (C(max)) was 1.45 +/- 0.38 (SD) microg/mL, at 0.74 +/- 0.43 h. At a dose of 15 g VCV, the mean C(max) was 5.26 +/- 2.82 microg/mL, at 1 +/- 0.27 h. The mean bioavailability of ACV from oral VCV was 60 +/- 12% after 5 g of VCV and 48 +/- 12% after 15 g VCV, and did not differ significantly between dose rates (P > 0.05). Superposition suggested that a loading dose of 27 mg/kg VCV every 8 h for 2 days, followed by a maintenance dose of 18 mg/kg every 12 h, will maintain effective serum ACV concentrations.


Subject(s)
Acyclovir/analogs & derivatives , Antiviral Agents/pharmacokinetics , Valine/analogs & derivatives , Acyclovir/administration & dosage , Acyclovir/blood , Acyclovir/pharmacokinetics , Administration, Oral , Animals , Antiviral Agents/administration & dosage , Antiviral Agents/blood , Area Under Curve , Biological Availability , Chromatography, High Pressure Liquid , Female , Half-Life , Horses , Infusions, Intravenous , Male , Metabolic Clearance Rate , Valacyclovir , Valine/administration & dosage , Valine/blood , Valine/pharmacokinetics
13.
J Appl Microbiol ; 105(2): 340-50, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18298531

ABSTRACT

AIMS: This study aimed to determine the bacterial community associated with wild-caught, mid-stage larvae of spiny lobsters (Palinuridae) in their native oligotrophic marine environment, and to compare their diversity and composition with communities associated with aquaculture-reared larvae of the tropical rock lobster Panulirus ornatus. METHODS AND RESULTS: Bacterial clone libraries constructed from wild P. ornatus (two libraries) and Panulirus penicillatus (one library) larvae (phyllosoma) revealed a dominance of alpha-proteobacterial sequences, with Sulfitobacter spp.-affiliated sequences dominating both P. ornatus libraries and constituting a major portion of the P. penicillatus library. Vibrio-related sequences were rarely detected from wild phyllosoma clone libraries in contrast to similar studies of aquaculture-reared animals. Scanning electron microscopy analysis revealed low levels of bacterial colonization on the external carapace of wild phyllosoma, again in contrast to aquaculture-reared animals, which are often colonized with filamentous bacteria (mainly Thiothrix sp.) that compromise their health. Fluorescence in situ hybridization of sectioned wild phyllosoma tissue displayed low overall abundance of bacteria within the tissue and on external surfaces, with alpha-, beta-, and gamma-Proteobacteria being confirmed as members of this bacterial community. CONCLUSIONS: The consistency in predominant clone sequences retrieved from the three libraries indicated a conserved microbiota associated with wild phyllosoma. In addition, the observed differences in the microbial composition and load of reared and wild phyllosoma are indicative of the different environments in which the animals live. SIGNIFICANCE AND IMPACT OF THE STUDY: Bacterial disease during early larval stages is a major constraint currently hindering the development of an aquaculture industry for the ornate rock lobster P. ornatus. Knowledge of the microbial community associated with wild animals will be advantageous for the identification of bacteria that may promote animal health.


Subject(s)
Bacteria/isolation & purification , Palinuridae/microbiology , Water Microbiology , Animals , Aquaculture , Australia , Bacteria/ultrastructure , Biodiversity , Gene Library , In Situ Hybridization, Fluorescence/methods , Larva/microbiology , Microscopy, Electron, Scanning , Oligonucleotide Probes/genetics , Palinuridae/ultrastructure , Phylogeny , RNA, Ribosomal, 16S/genetics , Seawater
16.
Pediatr Cardiol ; 26(6): 815-20, 2005.
Article in English | MEDLINE | ID: mdl-16132275

ABSTRACT

The objective of this study was to characterize the transfer of flecainide across the placenta and determine the fetal: maternal ratio of flecainide in the gravid baboon. Flecainide acetate has been especially successful for the treatment of fetal supraventricular tachycardia associated with hydrops fetalis. However, the degree of transplacental transmission remains unknown. In this study, all animals were placed under general anesthesia. Flecainide 2.5 mg/kg was administered intravenously. Percutaneous umbilical blood sampling was performed simultaneously with maternal sampling. Flecainide levels were measured using high-performance liquid chromatography with ultraviolet detection. A total of six gravid baboons were studied at an average gestational age of 132 days. The mean maternal volume of distribution at steady state was 5.1 +/- 1.8 L/kg. The mean combined elimination constant (k(el)) was 0.79 +/- 0.19 hr(-1) [95% confidence interval (CI), 0.64-0.93]. There was a linear relationship between maternal and fetal concentrations, with a ratio of fetal-to-maternal serum levels of 0.49 +/- 0.05 (95% CI, 0.39-0.59). At steady state, fetal flecainide levels are approximately 50% of maternal flecainide levels. Flecainide is rapidly distributed in the mother and fetus following a single intravenous dose with a maternal volume of distribution similar to that reported in normal healthy human adults. Since fetal levels correlate closely with maternal levels, we propose that it is possible to estimate fetal levels by monitoring maternal levels.


Subject(s)
Anti-Arrhythmia Agents/pharmacokinetics , Fetal Blood/metabolism , Fetus/metabolism , Flecainide/pharmacokinetics , Maternal-Fetal Exchange , Animals , Anti-Arrhythmia Agents/administration & dosage , Female , Flecainide/administration & dosage , Hydrops Fetalis/prevention & control , Infusions, Intravenous , Papio , Pregnancy , Tachycardia, Supraventricular/prevention & control
17.
Int J Syst Evol Microbiol ; 55(Pt 2): 913-917, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15774685

ABSTRACT

Six new Vibrio-like isolates originating from different species of bleached and healthy corals around Magnetic Island (Australia) were investigated using a polyphasic approach. Phylogenetic analyses based on 16S rRNA, recA and rpoA gene sequences split the isolates in two new groups. Strains LMG 22223(T), LMG 22224, LMG 22225, LMG 22226 and LMG 22227 were phylogenetic neighbours of Photobacterium leiognathi LMG 4228(T) (95.6 % 16S rRNA gene sequence similarity), whereas strain LMG 22228(T) was related to Enterovibrio norvegicus LMG 19839(T) (95.5 % 16S rRNA gene sequence similarity). The two new groups can be distinguished from closely related species on the basis of several phenotypic features, including fermentation of d-mannitol, melibiose and sucrose, and utilization of different compounds as carbon sources, arginine dihydrolase activity, nitrate reduction, resistance to the vibriostatic agent O/129 and the presence of fatty acids 15 : 0 iso and 17 : 0 iso. The names Photobacterium rosenbergii sp. nov. (type strain LMG 22223(T)=CBMAI 622(T)=CC1(T)) and Enterovibrio coralii sp. nov. (type strain LMG 22228(T)=CBMAI 623(T)=CC17(T)) are proposed to accommodate these new isolates. The G+C contents of the DNA of the two type strains are respectively 47.6 and 48.2 mol%.


Subject(s)
Anthozoa/metabolism , Anthozoa/microbiology , Photobacterium/classification , Vibrionaceae/classification , Animals , Bacterial Typing Techniques , DNA, Bacterial/analysis , DNA, Ribosomal/analysis , DNA-Directed RNA Polymerases/genetics , Genes, rRNA , Molecular Sequence Data , Phenotype , Photobacterium/genetics , Photobacterium/metabolism , Phylogeny , RNA, Ribosomal, 16S/genetics , Rec A Recombinases/genetics , Sequence Analysis, DNA , Species Specificity , Vibrionaceae/genetics , Vibrionaceae/metabolism
18.
J Appl Microbiol ; 95(6): 1293-303, 2003.
Article in English | MEDLINE | ID: mdl-14633004

ABSTRACT

AIMS: Vibrio harveyi is an important pathogen, causing potential devastation to marine aquaculture. This organism, however, is extremely difficult to identify because it is phenotypically diverse. Biochemical identification can involve many tests and take weeks to perform. The aim of this work is to develop a PCR that can reduce the number of biochemical tests, and the time taken, to get a definitive identification of this organism. METHODS AND RESULTS: The PCR was developed using 16S rDNA sequences from a number of V. harveyi strains, and other vibrios. The described test gave positive results for all strains of V. harveyi tested. However, some strains of V. alginolyticus also gave positive results and a small number of biochemical tests were required to differentiate between these two species. This indicated that preisolation of the bacteria was needed and therefore the test was not applicable to the testing of mixed populations directly. CONCLUSION, SIGNIFICANCE AND IMPACT OF THE STUDY: The duration of identification of this species was significantly reduced from a number of weeks to a few days. Hence, diagnosis of affected animals will be faster and earlier treatment can be administered which may increase the survival rate from vibriosis.


Subject(s)
Bacterial Typing Techniques/methods , Vibrio Infections/diagnosis , Vibrio/classification , Water Microbiology , Animals , Base Sequence , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Molecular Sequence Data , Polymerase Chain Reaction/methods , RNA, Ribosomal, 16S/genetics , Reproducibility of Results , Sensitivity and Specificity , Vibrio/genetics , Vibrio/isolation & purification , Vibrio Infections/veterinary
19.
Emerg Med J ; 20(4): 386-7, 2003 Jul.
Article in English | MEDLINE | ID: mdl-12835369

ABSTRACT

A 63 year old man presented with the signs of acute generalised peritonism in the presence of a clear chest radiograph. At laparotomy no abnormal findings were noted. Further inquiries revealed a history of recent acquisition of budgerigars, over the following days the chest radiograph developed patchy opacification. Subsequently IgG immunofluorescence confirmed the diagnosis of Chlamydia psittaci. The presentation of psittacosis with gastrointestinal features is well recognised. This is believed to be the first account in the literature of a human case of Chl psittaci pneumonia presenting with acute generalised peritonism indicating an exploratory laparotomy. It is suggested that Chl psittaci pneumonia should be considered in the differential diagnosis of an acute abdomen in the presence of a history of exposure to psittacine birds.


Subject(s)
Peritonitis/microbiology , Pneumonia, Bacterial/diagnosis , Psittacosis/diagnosis , Shock/microbiology , Acute Disease , Animals , Animals, Domestic , Diagnosis, Differential , Humans , Male , Melopsittacus , Middle Aged , Psittacosis/transmission
20.
Curr Top Microbiol Immunol ; 267: 271-308, 2002.
Article in English | MEDLINE | ID: mdl-12082994

ABSTRACT

WN virus is one of the most ubiquitous arboviruses occurring over a broad geographical range and in a wide diversity of vertebrate host and vector species. The virus appears to be maintained in endemic foci on the African continent and is transported annually to temperate climates to the north in Europe and to the south in South Africa. Reports of clinical disease due to natural WN virus infection in wild or domestic animals were much less common than reports of infection (virus isolation or antibody detection). Until recently, records of morbidity and mortality in wild birds were confined to a small number of cases and infections causing encephalitis, sometimes fatal, in horses were reported infrequently. In the period 1996-2001, there was an increase in outbreaks of illness due to WN virus in animals as well as humans. Within the traditional range of WN virus, encephalitis was reported in horses in Italy in 1998 and in France in 2000. The first report of disease and deaths caused by WN virus infection in domestic birds was reported in Israel in 1997-1999, involving hundreds of young geese. In 1999 WN virus reached North America and caused an outbreak of encephalitis in humans in the New York area at the same time as a number of cases of equine encephalitis and deaths in American crows and a variety of other bird species, both North American natives and exotics. Multi-state surveillance for WN virus has been in place since April 2000 and has resulted in the detection of WN virus in thousands of dead birds from an increasing number of species in North America, and also in several species of mammals. The surveillance system that has developed in North America because of the utility of testing dead birds for the rapid detection of WN virus presence has been a unique integration of public health and wildlife health agencies. It has been suggested that the recent upsurge in clinical WN virus infection in wild and domestic animals as well as in humans may be related to the emergence of one or more new strains of WN virus. Virus isolated in New York in 1999 was found to be identical to that from Israel. It was alarming for WN virus to so easily invade the United States and surprising that it became established so quickly in the temperature climate of New York. Its persistence and rapid expansion in the United States leave a number of unanswered questions. New disease characteristics and patterns have occurred and more are evolving as WN virus further invades the western hemisphere. Additional animal research is needed to answer these questions. Some of the research needs include bird migration as a mechanism of virus dispersal, vector and vertebrate host relationships, virus persistence mechanisms, laboratory diagnosis, viral pathogenesis, risk factor studies, vaccine development, and WN virus impact on wildlife (CDC 2001a). Determination of the primary reservoir host species that are involved in the epidemiology of WN virus and the suitable sentinel species for active surveillance are also important research areas.


Subject(s)
Animals, Domestic/virology , Animals, Wild/virology , West Nile Fever/veterinary , West Nile virus/isolation & purification , West Nile virus/pathogenicity , Amphibians/virology , Animals , Birds/virology , Disease Outbreaks/veterinary , Disease Reservoirs , Ecosystem , Horse Diseases/etiology , Horses/virology , Humans , Insect Control , Mammals/virology , Population Surveillance , Reptiles/virology , West Nile Fever/etiology
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