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1.
Genomics ; 88(3): 293-301, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16806805

ABSTRACT

Cone-rod dystrophy 1 (cord1) is a recessive condition that occurs naturally in miniature longhaired dachshunds (MLHDs). We mapped the cord1 locus to a region of canine chromosome CFA15 that is syntenic with a region of human chromosome 14 (HSA14q11.2) containing the retinitis pigmentosa GTPase regulator-interacting protein 1 (RPGRIP1) gene. Mutations in RPGRIP1 have been shown to cause Leber congenital amaurosis, a group of retinal dystrophies that represent the most common genetic causes of congenital visual impairment in infants and children. Using the newly available canine genome sequence we sequenced RPGRIP1 in affected and carrier MLHDs and identified a 44-nucleotide insertion in exon 2 that alters the reading frame and introduces a premature stop codon. All affected and carrier dogs within an extended inbred pedigree were homozygous and heterozygous, respectively, for the mutation. We conclude the mutation is responsible for cord1 and demonstrate that this canine disease is a valuable model for exploring disease mechanisms and potential therapies for human Leber congenital amaurosis.


Subject(s)
Chromosomes, Human, Pair 14/genetics , Codon, Nonsense , Mutagenesis, Insertional , Optic Atrophy, Hereditary, Leber/genetics , Proteins/genetics , Animals , Child , Child, Preschool , Cytoskeletal Proteins , DNA Mutational Analysis , Disease Models, Animal , Dogs , Exons/genetics , Humans , Infant , Pedigree
2.
Anim Genet ; 36(6): 497-501, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16293123

ABSTRACT

Copper toxicosis is an autosomal recessive disorder affecting Bedlington terriers, characterized by elevated liver copper levels and early death of affected dogs. Genetic linkage mapping studies initially identified linkage between the disease and the microsatellite marker C04107. Subsequently, the deletion of exon 2 of the copper metabolism domain containing 1 (COMMD1) gene (formerly MURR1) was shown to be the major cause of copper toxicosis, although the deletion breakpoints were not defined. In this investigation, polymerase chain reaction (PCR)-based techniques and sequencing were used to isolate the deletion breakpoints, utilizing the newly available dog genome sequence. The breakpoints were positioned at 65.3091 and 65.3489 Mb of dog chromosome 10, in intron 1 and intron 2 of COMMD1 respectively, a deletion of 39.7 kb. The two breakpoints share sequence homology suggesting that homologous recombination may have been responsible for the deletion. Using this information, a genomic diagnostic test for the COMMD1 deletion was developed and compared with microsatellite C04107 genotypes of 40 Bedlington terriers. Results from the 40 samples showed allele 2 of C04107 to be in linkage disequilibrium with the COMMD1 deletion.


Subject(s)
Base Sequence/genetics , Dog Diseases/genetics , Metabolism, Inborn Errors/veterinary , Mutation/genetics , Proteins/genetics , Sequence Deletion/genetics , Animals , Base Pairing , Copper/metabolism , Copper/toxicity , DNA Primers , Dogs , Exons/genetics , Linkage Disequilibrium , Metabolism, Inborn Errors/genetics , Microsatellite Repeats/genetics , Molecular Sequence Data , Sequence Analysis, DNA/veterinary
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