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1.
Am J Infect Control ; 44(3): 366-8, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-26521704

ABSTRACT

The spread of carbapenemase-producing Gram-negative rods is an emerging global problem. This study describes the epidemiologic features of an outbreak caused by an environmental reservoir of OXA-48-producing Klebsiella pneumoniae caused by persistence of the bacteria during 20 months in an intensive care unit in France. This report emphasizes the importance of early environmental screening to interrupt the transmission of carbapenemase-producingEnterobacteriaceae.


Subject(s)
Cross Infection/epidemiology , Disease Outbreaks , Environmental Microbiology , Intensive Care Units , Klebsiella Infections/epidemiology , Klebsiella pneumoniae/isolation & purification , beta-Lactamases/analysis , Aged , Aged, 80 and over , France , Genotype , Humans , Klebsiella pneumoniae/classification , Klebsiella pneumoniae/enzymology , Klebsiella pneumoniae/genetics , Male , Middle Aged , Molecular Typing
2.
Int J Antimicrob Agents ; 41(2): 130-6, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23280442

ABSTRACT

Imipenem (IPM) is a carbapenem antibiotic frequently used in severe hospital infections. Several reports have mentioned the emergence of resistant isolates exhibiting membrane modifications. A study was conducted between September 2005 and August 2007 to survey infections due to Enterobacter aerogenes in patients hospitalised in a French university hospital. Resistant E. aerogenes clinical isolates obtained from patients treated with IPM and collected during the 3 months following initiation of treatment were phenotypically and molecularly characterised for ß-lactamases, efflux pumps activity and outer membrane proteins. Among the 339 patients infected with E. aerogenes during the study period, 41 isolates (12.1%) were resistant to extended-spectrum cephalosporins and 17 patients (5.0%) were treated with IPM. The isolates from these 17 patients presented TEM-24 and basal efflux expression. Following IPM treatment, an IPM-intermediate-susceptible (IPM-I) isolate emerged in 11 patients and an IPM-resistant (IPM-R) isolate in 6 patients. A change in the porin balance (Omp35/Omp36) was observed in IPM-I isolates exhibiting ertapenem resistance. Finally, a porin deficiency (Omp35 and Omp36 absence) was detected in IPM-R isolates associated with efflux pump expression. This study indicates that the alteration in porin expression, including the shift of porin expression and lack of porins, contribute to the E. aerogenes adaptive response to IPM treatment.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Resistance, Bacterial , Enterobacter aerogenes/drug effects , Imipenem/pharmacology , Porins/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Enterobacter aerogenes/isolation & purification , Enterobacteriaceae Infections/microbiology , Female , France , Gene Expression Regulation, Bacterial , Hospitals, University , Humans , Infant , Infant, Newborn , Male , Microbial Sensitivity Tests , Middle Aged , Mutation , Selection, Genetic , Young Adult
3.
J Clin Microbiol ; 49(11): 3950-3, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21918033

ABSTRACT

We compared the virulence properties of a collection of asymptomatic bacteriuria (ABU) Escherichia coli strains to urinary tract infection (UTI) strains isolated from pregnant women in a university hospital over 1 year. The in vitro and in vivo studies suggest that ABU strains presented a virulence behavior similar to that of strains isolated from cases of cystitis.


Subject(s)
Bacteriuria/microbiology , Escherichia coli Infections/microbiology , Escherichia coli/isolation & purification , Escherichia coli/pathogenicity , Pregnancy Complications, Infectious/microbiology , Adult , Asymptomatic Infections , Escherichia coli/genetics , Escherichia coli Proteins/genetics , Female , Humans , Pregnancy , Prospective Studies , Urinary Tract Infections/microbiology , Virulence , Virulence Factors/genetics
4.
J Antimicrob Chemother ; 65(11): 2455-8, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20813808

ABSTRACT

OBJECTIVES: To determine the prevalence of multidrug-resistant (MDR) Gram-negative bacilli and extended spectrum ß-lactamase (ESBL)-producing isolates in stool specimens obtained from patients hospitalized for acute diarrhoea in a French university hospital. METHODS: Bacteria in stool specimens were screened for ESBL production on Drigalski agar supplemented with ceftazidime, ESBL CHROMagar(®) and CTX CHROMagar(®) media and confirmed by the double-disc synergy test. Genetic detection was performed by PCR and sequencing with bacterial DNA extracted from isolates. RESULTS: The presence of MDR bacteria was markedly high (96 of 303 patients, 31.7%). The majority of MDR bacteria were Enterobacter cloacae (44, 38%) and Escherichia coli (32, 28%). Moreover, the prevalence of ESBL and CTX-M producers among all included patients was 15.8% and 5.9%, respectively. The clone E. coli O25b : H4-ST131 was detected in 63% of CTX-M strains. Surprisingly, 16 carbapenemases (5.3% of patients) were isolated. CONCLUSIONS: The study revealed the wide dissemination of MDR bacteria, including carbapenemase producers, in a French hospital during a non-outbreak situation. Public health efforts to combat emergence and dissemination of MDR organisms need to be developed.


Subject(s)
Carrier State/epidemiology , Drug Resistance, Multiple, Bacterial , Feces/microbiology , Gram-Negative Bacteria/drug effects , Gram-Negative Bacteria/isolation & purification , Gram-Negative Bacterial Infections/epidemiology , beta-Lactamases/biosynthesis , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , DNA, Bacterial/genetics , Diarrhea/microbiology , Female , France , Gram-Negative Bacteria/enzymology , Hospitalization , Hospitals, University , Humans , Infant , Infant, Newborn , Male , Microbial Sensitivity Tests/methods , Middle Aged , Polymerase Chain Reaction/methods , Young Adult , beta-Lactamases/genetics
5.
Diabetes Care ; 30(8): 2051-6, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17473061

ABSTRACT

OBJECTIVE: We sought to evaluate the use of oligonucleotide arrays to discriminate colonization from infection due to Staphylococcus aureus in diabetic foot ulcers. RESEARCH DESIGN AND METHODS: We included diabetic patients hospitalized in a diabetic foot department for an episode of foot ulcer. Only patients who had no antibiotic treatment during the previous 6 months were included. At admission, ulcers were classified on clinical examination, according to the Infectious Diseases Society of America system. Seventy-two patients with a culture positive only for S. aureus as the sole pathogen were included. In individuals with a grade 1 ulcer, a second wound bacterial specimen was obtained 1 month later. Using oligonucleotide arrays, S. aureus resistance and virulence genes were compared between grade 1 and grades 2-4 ulcers. RESULTS: S. aureus was initially isolated from 22 grade 1 and 50 grade 2-4 ulcers: 35 were methicillin resistant and 37 methicillin sensitive. In 20 grade 1 ulcers (92%), no virulence genes were identified, whereas these genes were present in all but 1 grade 2-4 ulcers. During follow-up, the two grade 1 ulcers that were infected with strains carrying virulence genes rapidly deteriorated; the array technology showed unchanged genotype profiles. On the contrary, two grade 1 ulcers healed: the genotype profiles were different from those at inclusion but without appearance of virulence genes. CONCLUSIONS: The DNA array appears as a promising technique and is easy to perform. Our observational study suggests that it might help distinguish colonized grade 1 from infected grade 2 wounds, predict ulcer outcome, and contribute to a more adequate use of antibiotics.


Subject(s)
Diabetic Foot/microbiology , Foot Ulcer/microbiology , Oligonucleotide Array Sequence Analysis , Staphylococcal Infections/diagnosis , Staphylococcus aureus/genetics , Adult , Aged , Aged, 80 and over , Anti-Bacterial Agents/therapeutic use , DNA, Bacterial/genetics , Diagnosis, Differential , Female , Glycated Hemoglobin/analysis , Humans , Male , Methicillin Resistance , Middle Aged , Miniaturization , Staphylococcal Infections/drug therapy , Staphylococcus aureus/drug effects
6.
J Clin Microbiol ; 45(2): 620-6, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17108071

ABSTRACT

In 2004, 65 CTX-M-producing Escherichia coli isolates were collected from infected patients in four French hospitals. The blaCTX-M-15 genes were predominant. Pulsed-field gel electrophoresis highlighted a clonal propagation of CTX-M-15-producing strains belonging to phylogenetic group B2, notably in the community. The main risk factors for acquiring these isolates were urinary tract infections or the presence of a urinary catheter in diabetic or renal failure patients.


Subject(s)
Escherichia coli Infections/epidemiology , Escherichia coli/genetics , Hospitals , Molecular Epidemiology , beta-Lactamases/biosynthesis , Aged , Electrophoresis, Gel, Pulsed-Field , Escherichia coli/classification , Escherichia coli/drug effects , Escherichia coli/enzymology , Escherichia coli Infections/microbiology , Female , France/epidemiology , Humans , Male , Phylogeny , Prevalence , Risk Factors , Urinary Tract Infections/epidemiology , Urinary Tract Infections/microbiology , beta-Lactamases/genetics
7.
Antimicrob Agents Chemother ; 50(12): 4224-8, 2006 Dec.
Article in English | MEDLINE | ID: mdl-16982788

ABSTRACT

By PCR, we screened for qnr genes 112 clinical isolates of extended-spectrum beta-lactamase-producing Escherichia coli collected from hospitals in France during 2004. For the first time, 7.7% of CTX-M-producing E. coli isolates presented a plasmid-mediated resistance to quinolones. All strains harbored a qnrA gene located on a sul1-type class 1 integron with similar structure to the In36 integron.


Subject(s)
Escherichia coli/enzymology , Escherichia coli/isolation & purification , Genes, Bacterial , beta-Lactamases/biosynthesis , Anti-Infective Agents/pharmacology , Drug Resistance, Bacterial/genetics , Escherichia coli/drug effects , France , Integrons , Microbial Sensitivity Tests , Nalidixic Acid/pharmacology , Plasmids/genetics , Polymerase Chain Reaction , Quinolones/pharmacology
8.
J Clin Microbiol ; 43(7): 3512-5, 2005 Jul.
Article in English | MEDLINE | ID: mdl-16000493

ABSTRACT

We report the first strain of glycopeptide-resistant Enterococcus faecium from Europe that contains a vanD allele isolated from blood cultures of an immunocompromised patient hospitalized in a French university hospital. Based on phenotypic results, PCR sequencing, pulsed-field gel electrophoresis, and Southern blotting, the isolate was assigned to E. faecium with a chromosomally located VanD allele most closely related to the VanD1 allele.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , Drug Resistance, Bacterial , Enterococcus faecium/isolation & purification , Glycopeptides , Gram-Positive Bacterial Infections/microbiology , Peptide Synthases/genetics , Amino Acid Sequence , Electrophoresis, Gel, Pulsed-Field , Enterococcus faecium/classification , Enterococcus faecium/drug effects , Enterococcus faecium/genetics , Europe , Fatal Outcome , Humans , Male , Microbial Sensitivity Tests , Middle Aged , Molecular Sequence Data
9.
J Clin Microbiol ; 43(2): 886-9, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15695696

ABSTRACT

We report the first case of pacemaker endocarditis due to a new rod-shaped Neisseria sp. isolated from blood culture. On the basis of rrs sequencing, the isolate was found to be most closely related to an uncultured organism from human subgingival plaque and was identified as Neisseria sp. group AK105. A cure was achieved after a combination of surgical and antibiotic treatment. Oral flora-induced pacemaker endocarditis is a rare condition that reinforces the need for good oral hygiene as an important preventive measure.


Subject(s)
Endocarditis, Bacterial/microbiology , Neisseria/isolation & purification , Neisseriaceae Infections/microbiology , Pacemaker, Artificial/adverse effects , Prosthesis-Related Infections/microbiology , Adult , Humans , Male , Neisseria/classification , Pacemaker, Artificial/microbiology
10.
J Clin Microbiol ; 42(8): 3805-8, 2004 Aug.
Article in English | MEDLINE | ID: mdl-15297534

ABSTRACT

In 2002, 80 isolates of Enterobacteriaceae producing extended-spectrum beta-lactamases (ESBLs) were collected from infected patients in our hospital. Enterobacter aerogenes was the most common bacterium isolated from all specimens (36.5%). The ESBLs were predominantly (90%) TEM derivatives (TEM-24, TEM-3). Pulsed-field gel electrophoresis highlighted that E. aerogenes, Klebsiella pneumoniae, and Citrobacter koseri had a clonal propagation.


Subject(s)
Enterobacteriaceae Infections/epidemiology , Enterobacteriaceae/isolation & purification , beta-Lactamases/metabolism , Enterobacteriaceae/classification , Enterobacteriaceae/enzymology , Enterobacteriaceae/genetics , France/epidemiology , Humans , Inpatients/statistics & numerical data , Molecular Epidemiology/methods , Phylogeny
11.
J Clin Microbiol ; 41(5): 2223-6, 2003 May.
Article in English | MEDLINE | ID: mdl-12734285

ABSTRACT

The first ever case of spondylodiscitis caused by Clostridium ramosum in an elderly immunocompetent patient has been reported. C. ramosum is usually an intestinal bacterium but may occasionally be isolated in clinical specimens as an opportunistic pathogen. This report shows that this anaerobic organism can cause bone tropism without there having been any contamination due to spinal surgery. The infection cleared after empirical therapy using intravenous amoxicillin and oral metronidazole.


Subject(s)
Clostridium Infections/etiology , Clostridium/pathogenicity , Discitis/etiology , Aged , Base Sequence , Clostridium/classification , Clostridium/genetics , Clostridium/isolation & purification , Clostridium Infections/immunology , Clostridium Infections/microbiology , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Discitis/immunology , Discitis/microbiology , Humans , Immunocompetence , Male , Species Specificity
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