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1.
J Asthma ; 51(4): 440-5, 2014 May.
Article in English | MEDLINE | ID: mdl-24393080

ABSTRACT

OBJECTIVES: The aim of this study was to evaluate inhaler technique and symptom control in patients with poorly controlled asthma at baseline and at follow-up in a dedicated asthma clinic in a tertiary hospital. We also investigated the impact of asthma on these patients' quality of life. METHODS: Patients referred to a newly established asthma clinic in Cork University Hospital were prospectively recruited over a 6-month period. Their inhaler technique was assessed by a pulmonary nurse specialist using a validated scoring system. They received instruction on inhaler usage when scores were suboptimal. Patients completed a validated asthma control questionnaire (ACQ) and asthma quality of life questionnaire (AQLQ). At follow-up 3-4 months later, the inhaler technique was reassessed and the ACQ questionnaire repeated. RESULTS: Forty-six patients were recruited (female = 74%), and 40/46 were followed up. Mean [SD] FEV1 % predicted at baseline = 76.5% [21.5]. About 63% of the patients were classified as incorrectly using their inhaler at their initial assessment. This decreased to 20% at follow-up, indicating an overall significant improvement in inhaler usage post-training (p = 0.003). ACQ scores improved significantly from median [interquartile range] 2.70 [1.66] to 2.00 [1.90] (p = 0.002). Baseline measurement indicated that patients' quality of life was moderately affected by asthma, with a median AQLQ score of 4.75 [1.97]. CONCLUSION: This study demonstrates the importance of educating and formally assessing inhaler technique in patients with asthma as a part of their ongoing clinical review.


Subject(s)
Anti-Asthmatic Agents/administration & dosage , Asthma/drug therapy , Nebulizers and Vaporizers/statistics & numerical data , Patient Compliance/statistics & numerical data , Patient Education as Topic/methods , Administration, Inhalation , Adult , Ambulatory Care/methods , Ambulatory Care Facilities , Asthma/diagnosis , Cohort Studies , Female , Follow-Up Studies , Humans , Ireland , Male , Middle Aged , Prospective Studies , Quality Control , Risk Assessment , Treatment Outcome , Young Adult
2.
Clin Genet ; 59(2): 88-98, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11260209

ABSTRACT

Defects in the lipoprotein lipase (LPL) gene are associated with dyslipidemia in the general population. Several rare mutations in the gene, as well as two common coding region polymorphisms, D9N and N291S, exhibit deleterious effects on circulating lipid levels. Using a linkage-based approach, we have identified a large Utah kindred segregating the D9N variant in the LPL gene. The kindred was ascertained for premature coronary heart disease and was expanded based on familial dyslipidemia. A genomic scan identified a region of linkage including LPL, and mutation screening identified the segregating variant. In the kindred, the variant shows high penetrance for a hypoalphalipoproteinemia phenotype, but is also associated with hypertriglyceridemia and elevated insulin levels. The strength of linkage was dependent on the combination of phenotype definition and model parameters, favoring the use of a MOD score approach. Most other studies of LPL have proceeded by mutation screening of randomly chosen individuals or selected affected probands; this is the first example identifying a segregating LPL mutation using direct linkage.


Subject(s)
Cholesterol, HDL/blood , Coronary Disease/genetics , Genetic Variation/genetics , Lipoprotein Lipase/genetics , Triglycerides/blood , Aged , Coronary Disease/blood , Coronary Disease/complications , Female , Genetic Linkage , Genetic Predisposition to Disease , Humans , Hyperlipidemias/genetics , Lipoprotein Lipase/blood , Male , Middle Aged , Mutation , Pedigree , United States , Utah , White People/genetics
3.
Am J Hum Genet ; 66(6): 1845-56, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10775531

ABSTRACT

Coronary heart disease (CHD) accounts for half of the 1 million deaths annually ascribed to cardiovascular disease and for almost all of the 1.5 million acute myocardial infarctions. Within families affected by early and apparently heritable CHD, dyslipidemias have a much higher prevalence than in the general population; 20%-30% of early familial CHD has been ascribed to primary hypoalphalipoproteinemia (low HDL-C). This study assesses the evidence for linkage of low HDL-C to chromosomal region 11q23 in 105 large Utah pedigrees ascertained with closely related clusters of early CHD and expanded on the basis of dyslipidemia. Linkage analysis was performed by use of 22 STRP markers in a 55-cM region of chromosome 11. Two-point analysis based on a general, dominant-phenotype model yielded LODs of 2.9 for full pedigrees and 3.5 for 167 four-generation split pedigrees. To define a localization region, model optimization was performed using the heterogeneity, multipoint LOD score (mpHLOD). This linkage defines a region on 11q23.3 that is approximately 10 cM distal to-and apparently distinct from-the ApoAI/CIII/AIV gene cluster and thus represents a putative novel localization for the low HDL-C phenotype.


Subject(s)
Chromosomes, Human, Pair 11/genetics , Tangier Disease/genetics , Cholesterol, HDL/metabolism , Chromosome Mapping , Female , Genes, Dominant/genetics , Genetic Heterogeneity , Genotype , Humans , Lod Score , Male , Microsatellite Repeats/genetics , Models, Genetic , Pedigree , Penetrance , Tangier Disease/metabolism , Utah
4.
J Biol Chem ; 275(22): 17173-9, 2000 Jun 02.
Article in English | MEDLINE | ID: mdl-10747874

ABSTRACT

The SCAN domain is described as a highly conserved, leucine-rich motif of approximately 60 amino acids found at the amino-terminal end of zinc finger transcription factors. Although no specific biological function has been attributed to the SCAN domain, its predicted amphipathic secondary structure led to the suggestion that this domain may mediate protein-protein associations. A yeast two-hybrid screen identified members of two SCAN domain protein families that interact with the SCAN domain of the zinc finger protein ZNF202. The interacting ZNF191 protein represents the family of SCAN domain-containing zinc finger proteins, whereas the novel SDP1 protein establishes a new family of genes that encode an isolated SCAN domain. Isolated SCAN domain proteins may form asymmetric homodimers in solution. Biochemical binding studies confirmed the associations of ZNF191 and SDP1 with ZNF202 and established the SCAN domain as a selective hetero- and homotypic oligomerization domain. SCAN mediated protein associations might therefore represent a new regulatory mechanism of transcriptional activity.


Subject(s)
Intracellular Signaling Peptides and Proteins , Transcription Factors/metabolism , Zinc Fingers , Amino Acid Sequence , Biopolymers , Cell Line , Humans , Molecular Sequence Data , Sequence Homology, Amino Acid , Trans-Activators , Transcription Factors/chemistry , Transcription Factors/genetics , Two-Hybrid System Techniques
5.
J Biol Chem ; 275(21): 15685-90, 2000 May 26.
Article in English | MEDLINE | ID: mdl-10748193

ABSTRACT

The ZNF202 gene resides in a chromosomal region linked genetically to low high density lipoprotein cholesterol in Utah families. Here we show that the ZNF202 gene product is a transcriptional repressor that binds to elements found predominantly in genes that participate in lipid metabolism. Among its targets are structural components of lipoprotein particles (apolipoproteins AIV, CIII, and E), enzymes involved in lipid processing (lipoprotein lipase, lecithin cholesteryl ester transferase), and several genes involved in processes related to energy metabolism and vascular disease. Based on the linkage and apparent transcriptional function of ZNF202, we propose that ZNF202 is a candidate susceptibility gene for human dyslipidemia.


Subject(s)
Carrier Proteins/metabolism , Lipid Metabolism , Zinc Fingers/genetics , Alternative Splicing/genetics , Apolipoproteins/metabolism , Binding Sites , Carrier Proteins/genetics , Cell Line , Chromosome Mapping , Chromosomes, Human, Pair 11 , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Databases, Factual , Gene Expression Regulation , Genetic Linkage , Humans , Hyperlipidemias/etiology , Hyperlipidemias/genetics , Repressor Proteins/genetics , Repressor Proteins/metabolism , Sequence Alignment , Transcription Factors/genetics , Transcription Factors/metabolism , Utah
6.
Arterioscler Thromb Vasc Biol ; 20(4): 1089-93, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10764678

ABSTRACT

Clinical familial hypercholesterolemia has been shown to result from mutations in 2 genes, the low density lipoprotein (LDL) receptor on chromosome 19 and apolipoprotein B on chromosome 2. However, we have recently described a Utah pedigree in which linkage to both genes was clearly excluded. A multipoint linkage analysis of 583 markers genotyped on 31 (18 affected) members of this pedigree was undertaken to localize a genetic region that may harbor a third gene that could result in clinical familial hypercholesterolemia. A multipoint log of the odds score of 6.8 was obtained for markers on 1p32. Haplotype carriers and affected status are completely concordant (18/18 persons). The phenotype is also expressed in young children (ages 4 and 9). Specific recombinant individuals in the pedigree restrict the region of linkage to an approximately 17 cM interval between polymorphic markers D1S2130 and D1S1596. This region appears to overlap the region found linked to severe hypercholesterolemia in French and Spanish families. The identification of the gene in this region may provide important pathophysiological insights into new mechanisms that may lead to highly elevated LDL cholesterol and other associated dyslipidemic phenotypes.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 1 , Hypercholesterolemia/genetics , Adolescent , Adult , Apolipoproteins B/genetics , Female , Haplotypes , Humans , Lod Score , Male , Middle Aged , Pedigree , Receptors, LDL/genetics , Utah
7.
Glycobiology ; 8(3): 259-68, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9451035

ABSTRACT

Peripheral alpha1,3-fucosylation of glycans occurs by the action of either one of five different alpha1,3-fucosyltransferases (Fuc-Ts) cloned to date. Fuc-TVI is one of the alpha1,3-fucosyltransferases which is capable to synthesize selectin ligands. The major alpha1, 3-fucosyltransferase activity in human plasma is encoded by the gene for fucosyltransferase VI, which presumably originates from liver cells. While the sequence, chromosomal localization, and kinetic properties of Fuc-TVI are known, immunocytochemical localization and trafficking studies have been impossible because of the lack of specific antibodies. Here we report on the development and characterization of a peptide-specific polyclonal antiserum monospecific to Fuc-TVI and an antiserum to purified soluble recombinant Fuc-TVI crossreactive with Fuc-TIII and Fuc-TV. Both antisera were applied for immunodetection in stably transfected CHO cells expressing the full-length form of this enzyme (CHO clone 61/11). Fuc-TVI was found to be a resident protein of the Golgi apparatus. In addition, more than 30% of cell-associated and released enzyme activity was found in the medium. Maturation and release of Fuc-TVI was analyzed in metabolically labeled CHO 61/11 cells followed by immunoprecipitation. Fuc-TVI occurred in two forms of 47 kDa and 43 kDa bands, while the secreted form was detected as a 43 kDa. These two different intracellular forms arose by posttranslational modification, as shown by pulse-chase experiments. Fuc-TVI was released to the supernatant by proteolytic cleavage as a partially endo-H resistant glycoform.


Subject(s)
CHO Cells/enzymology , Fucosyltransferases/chemistry , Animals , Cricetinae , Enzyme-Linked Immunosorbent Assay , Fluorescent Antibody Technique , Fucosyltransferases/immunology , Golgi Apparatus/enzymology , Hexosaminidases/metabolism , Immunohistochemistry , Isoenzymes/analysis , Mannosyl-Glycoprotein Endo-beta-N-Acetylglucosaminidase , Molecular Weight , Protein Processing, Post-Translational/physiology , Recombinant Proteins/analysis , Transfection/genetics
8.
Biochemistry ; 35(36): 11747-55, 1996 Sep 10.
Article in English | MEDLINE | ID: mdl-8794755

ABSTRACT

Synthetic combinatorial libraries have proven to be a valuable source of diverse structures useful for large-scale biochemical screening. Their use has greatly facilitated the study of protein-protein interactions. We have developed a practical technique for screening such libraries by integrating affinity chromatography selection with electrospray ionization mass spectrometric detection, referred to as library affinity selection-mass spectrometry (LAS-MS). The process allows for rapid and efficient screening of solution phase libraries and provides detailed information such as the relative affinities of substrates. The method is generally applicable to include nonpeptide libraries; moreover, electrospray tandem mass spectrometry (ES-MS/MS) yields sequence-specific identification of individual components without the need for chemical tags. This technique is demonstrated using the Src homology 2 (SH2) domain of phosphatidylinositol 3-kinase (PI 3-kinase). The critical importance of methionine in the position +3 (relative to the phosphotyrosine position) is demonstrated in a library built with a phosphotyrosine mimic, (phosphonodifluoromethyl)phenylalanine. The described method has broad applicability to combinatorial library screening.


Subject(s)
Mass Spectrometry/methods , Peptides/chemistry , Phosphotransferases (Alcohol Group Acceptor)/chemistry , src Homology Domains , Amino Acid Sequence , Chromatography, Affinity , Escherichia coli/genetics , Gene Library , Ligands , Methionine/chemistry , Molecular Sequence Data , Peptides/genetics , Phosphatidylinositol 3-Kinases , Phosphotyrosine/chemistry , Protein Binding , Recombinant Fusion Proteins/chemistry
9.
FEBS Lett ; 371(3): 315-20, 1995 Sep 11.
Article in English | MEDLINE | ID: mdl-7556619

ABSTRACT

The search for isoform-specific enzyme inhibitors has been the focus of much recent research effort. Towards this goal, human recombinant cyclooxygenase-2 (EC 1.14.99.1, prostaglandin H synthase) was expressed in insect cells and purified to > 98% purity. Recombinant enzyme was characterized both by physical methods and activity measurements and shown to be fully active with kinetic properties similar to native COX-2 and COX-1. After detergent extraction, the enzyme had hydrodynamic properties indistinguishable from native bovine COX-1 and corresponded to the enzyme dimer as measured with size-exclusion chromatography. Peptide mapping via Lys-C protease identified a site of N-linked glycosylation and the aspirin covalent modification site. In the presence of heme, aspirin-specifically acetylated Ser-516. The enzyme will be suitable for biophysical studies and may lead to isoform-specific enzyme inhibitors.


Subject(s)
Aspirin/metabolism , Prostaglandin-Endoperoxide Synthases/metabolism , Amino Acid Sequence , Amino Acids/analysis , Animals , Binding Sites , Cattle , Gene Expression Regulation, Enzymologic , Glycosylation , Humans , Kinetics , Molecular Sequence Data , Peptide Mapping , Prostaglandin-Endoperoxide Synthases/genetics , Prostaglandin-Endoperoxide Synthases/isolation & purification , Recombinant Fusion Proteins/isolation & purification , Recombinant Fusion Proteins/metabolism , Serine/metabolism
10.
Biochem Biophys Res Commun ; 201(1): 356-62, 1994 May 30.
Article in English | MEDLINE | ID: mdl-8198595

ABSTRACT

The open reading frame of human cyclooxygenase-2 was cloned by pcr amplification of IL-1 beta stimulated human dermal fibroblast cDNA. The coding region was used to construct a recombinant baculovirus which when used to infect Sf9 cells directed the expression of recombinant human cyclooxygenase-2. The heterologously expressed enzyme was characterized and found to display all salient features of cyclooxygenase. Large-scale microsomal preparations of infected cells yielded more than 20 units of enzyme with a specific activity of 240 nmoles prostaglandin product/mg protein.


Subject(s)
Prostaglandin-Endoperoxide Synthases/genetics , Animals , Base Sequence , Cell Compartmentation , Cloning, Molecular , Cyclooxygenase Inhibitors/pharmacology , DNA Primers/chemistry , Gene Expression , Humans , Molecular Sequence Data , Moths , Prostaglandin-Endoperoxide Synthases/metabolism , Prostaglandins/biosynthesis , RNA, Messenger/genetics , Recombinant Proteins
11.
Biochem Biophys Res Commun ; 187(1): 152-7, 1992 Aug 31.
Article in English | MEDLINE | ID: mdl-1520296

ABSTRACT

The polymerase chain reaction was used to amplify a novel fucosyltransferase cDNA (FucT-VI) from A431 and from HL60 cells. The amplified cDNA has a high degree of sequence identity to FucT-V and to FucT-III, and a much lower level of similarity to FucT-IV. Transfection of the FucT-VI gene into mammalian cells confers alpha-1,3 fucosyltransferase activity to the cells, resulting in cell surface expression of Lewis x and sialyl-Lewis x carbohydrates. In contrast to FucT-IV activity, FucT-VI catalyzes the transfer of fucose from GDP-beta-fucose to alpha-2,3 sialylated substrates. The substrate specificity of the FucT-VI gene product suggests that FucT-VI may be an enzyme involved in the biosynthesis of the E-Selectin ligand, sialyl-Lewis x, in myeloid cells.


Subject(s)
Cloning, Molecular , Fucosyltransferases/genetics , Gene Expression , Isoenzymes/genetics , Amino Acid Sequence , Base Sequence , Cell Line , DNA/chemistry , DNA/genetics , Fucosyltransferases/chemistry , Fucosyltransferases/metabolism , Humans , Isoenzymes/chemistry , Isoenzymes/metabolism , Molecular Sequence Data , Polymerase Chain Reaction , Transfection
12.
Int J Pept Protein Res ; 40(2): 141-7, 1992 Aug.
Article in English | MEDLINE | ID: mdl-1280251

ABSTRACT

The acyl transfer rate for proline, in the prior thiol capture strategy, was enhanced by changing the electronic character of the dibenzofuran template. The rate of amide bond formation between proline and cysteine by the 1-chloro-4-hydroxy-6-mercaptodibenzofuran was measured to be 0.012 min-1, which translates to a half-life of 53 min. Further enhancement of the reaction rate was accomplished by the use of a 1,3-dichloro-dibenzofuran template. The k1 for the reaction was measured to be 0.093 min-1, and the half-life was calculated to be 7 min. To test the applicability of the activated template, 1-chloro-4-hydroxy-6-mercaptodibenzofuran, in peptide synthesis, the 34 amino acid long peptide, H-RPDFCLEPPYTGPCRKARNNFKSADECMRTCGGA-OH, was synthesized. This peptide represents the condensation of the N-terminal 13-mer and the C-terminal 21-mer of the basic pancreatic trypsin inhibitor.


Subject(s)
Benzofurans/chemistry , Peptides/chemical synthesis , Proline/chemistry , Sulfhydryl Compounds/chemistry , Acetylation , Amino Acid Sequence , Aprotinin/chemical synthesis , Cysteine/chemistry , Kinetics , Molecular Sequence Data , Sulfhydryl Compounds/chemical synthesis
13.
J Cell Biol ; 110(1): 147-53, 1990 Jan.
Article in English | MEDLINE | ID: mdl-1688560

ABSTRACT

Murine and human leukocytes express surface glycoproteins, termed homing receptors (HRs), containing lectin-like, EGF-like (egf), and complement binding-like domains, that apparently endow these cells with the ability to home to peripheral lymph nodes (pln's) by virtue of an adhesive interaction with the pln postcapillary venule endothelium. The murine pln HR was initially characterized with a rat monoclonal antibody, Mel 14, that was specific for the murine form of the receptor. This work demonstrated that Mel 14 blocked the binding of murine lymphocytes to pln endothelium both in vitro and in vivo, a result consistent with the possibility that this monoclonal antibody recognizes a region of the HR that is involved with endothelium recognition and adhesion. In addition, this antibody also blocked the binding to the HR of PPME, a polyphosphomannan carbohydrate known to inhibit lymphocyte-pln endothelium interactions, suggesting that Mel 14 may recognize the lectin domain of the pln HR. Here we show that, while Mel 14 recognized truncated HR containing both the lectin and egf domains, antibody recognition was lost when the lectin domain alone was expressed. Chimeric molecules, in which regions of the lectin domain of the non-Mel 14-reactive human pln HR were replaced with homologous regions of the murine pln HR, demonstrated that the Mel 14 recognition site is within the NH2-terminal 53 amino acids of the lectin domain. These results suggest that the Mel 14 monoclonal antibody recognizes a determinant within the lectin domain of the pln HR whose conformation may be dependent upon the presence of the egf domain. Since Mel 14 efficiently blocks lymphocyte-endothelial interactions, these results support the hypothesis that the pln HR lectin domain may be directly involved with binding of lymphocytes to a carbohydrate ligand on the pln postcapillary venule endothelium.


Subject(s)
Antibodies, Monoclonal , Antigens, Surface/analysis , Epitopes/analysis , Lectins/analysis , Lymph Nodes/immunology , Membrane Glycoproteins/analysis , Receptors, Immunologic/analysis , Animals , Antigen-Antibody Complex , Chimera , Chromosome Deletion , Humans , Immunoglobulin G , Mannans , Mannosephosphates , Mice , Mutation , Plant Lectins , Protein Conformation , Receptors, Immunologic/genetics , Receptors, Immunologic/immunology , Receptors, Lymphocyte Homing , Recombinant Proteins/analysis , Transfection
14.
J Cell Biol ; 109(1): 421-7, 1989 Jul.
Article in English | MEDLINE | ID: mdl-2663882

ABSTRACT

Lymphocyte trafficking is a fundamental aspect of the immune system that allows B and T lymphocytes with diverse antigen recognition specificities to be exposed to various antigenic stimuli in spatially distinct regions of an organism. A lymphocyte adhesion molecule that is involved with this trafficking phenomenon has been termed the homing receptor. Previous work (Lasky, L., T. Yednock, M. Singer, D. Dowbenko, C. Fennie, H. Rodriguez, T. Nguyen, S. Stachel, and S. Rosen. 1989. Cell. 56:1045-1055) has characterized a cDNA clone encoding a murine homing receptor that is involved in trafficking of lymphocytes to peripheral lymph nodes. This molecule was found to contain a number of protein motifs, the most intriguing of which was a carbohydrate binding domain, or lectin, that is apparently involved in the adhesive interaction between murine lymphocytes and peripheral lymph node endothelium. In this study, we have used the murine cDNA clone to isolate a human homologue of this peripheral lymph node-specific adhesion molecule. The human receptor was found to be highly homologous to the murine receptor in overall sequence, but showed no sequence similarity to another surface protein that may be involved with human lymphocyte homing, the Hermes glycoprotein. The extracellular region of the human receptor contained an NH2 terminally located carbohydrate binding domain followed by an EGF-like domain and a domain containing two repeats of a complement binding motif. Transient cell transfection assays using the human receptor cDNA showed that it encoded a surface glycoprotein that cross reacted with a polyclonal antibody directed against the murine peripheral lymph node homing receptor. Interestingly, the human receptor showed a high degree of sequence homology to another human cell adhesion glycoprotein, the endothelial cell adhesion molecule ELAM.


Subject(s)
Cell Adhesion , Membrane Glycoproteins/physiology , Receptors, Immunologic/physiology , Amino Acid Sequence , Antigens, Surface/physiology , Base Sequence , Cell Adhesion Molecules , Cloning, Molecular , DNA/genetics , Humans , Lectins , Membrane Glycoproteins/ultrastructure , Molecular Sequence Data , Receptors, Immunologic/ultrastructure , Receptors, Lymphocyte Homing , Structure-Activity Relationship
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