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1.
Appl Environ Microbiol ; 76(1): 264-74, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19880653

ABSTRACT

Bioluminescence imaging (BLI) is emerging as a powerful tool for real-time monitoring of infections in living animals. However, since luciferases are oxygenases, it has been suggested that the requirement for oxygen may limit the use of BLI in anaerobic environments, such as the lumen of the gut. Strains of Escherichia coli harboring the genes for either the bacterial luciferase from Photorhabdus luminescens or the PpyRE-TS and PpyGR-TS firefly luciferase mutants of Photinus pyralis (red and green thermostable P. pyralis luciferase mutants, respectively) have been engineered and used to monitor intestinal colonization in the streptomycin-treated mouse model. There was excellent correlation between the bioluminescence signal measured in the feces (R2=0.98) or transcutaneously in the abdominal region of whole animals (R2=0.99) and the CFU counts in the feces of bacteria harboring the luxABCDE operon. Stability in vivo of the bioluminescence signal was achieved by constructing plasmid pAT881(pGB2OmegaPamiluxABCDE), which allowed long-term monitoring of intestinal colonization without the need for antibiotic selection for plasmid maintenance. Levels of intestinal colonization by various strains of E. coli could be compared directly by simple recording of the bioluminescence signal in living animals. The difference in spectra of light emission of the PpyRE-TS and PpyGR-TS firefly luciferase mutants and dual bioluminescence detection allowed direct in vitro and in vivo quantification of two bacterial populations by measurement of red and green emitted signals and thus monitoring of the two populations simultaneously. This system offers a simple and direct method to study in vitro and in vivo competition between mutants and the parental strain. BLI is a useful tool to study intestinal colonization.


Subject(s)
Escherichia coli Infections/microbiology , Escherichia coli/growth & development , Gastrointestinal Tract/microbiology , Luciferases, Bacterial/metabolism , Luciferases/metabolism , Luminescence , Whole Body Imaging/methods , Animals , Colony Count, Microbial , Escherichia coli/genetics , Luciferases/genetics , Luciferases, Bacterial/genetics , Mice , Mice, Inbred BALB C , Plasmids , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Staining and Labeling/methods
2.
J Biol Inorg Chem ; 6(5-6): 490-503, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11472013

ABSTRACT

A derivative of rat microsomal cytochrome b5, obtained by substitution of the native heme moiety with protoporphyrin IX dimethyl ester, has been characterized by 1H and 15N NMR spectroscopy. Besides the two usual A and B forms, which depend on the orientation of the heme in the prostethic group cavity, two other minor forms have been detected which presumably indicate different conformations of the vinyl side chains. The shifts of the heme methyls, as well as the directions of the rhombic axes of the magnetic susceptibility tensor, indicate a small difference in the orientation of the imidazole planes of the histidine axial ligands. The solution structure was determined by using 1,303 meaningful NOEs and 241 pseudocontact shifts, the latter being derived from the native reduced protein. A family of 40 energy-minimized conformers was obtained with average RMSD of 0.56+/-0.09 A and 1.04+/-0.12 A for backbone and heavy atoms, respectively, and distance and pseudocontact shift penalty functions of 0.50+/-0.07 A2 and 0.51+/-0.02 ppm2. The structure shows some changes around the cavity and in particular a movement of the 60-70 backbone segment owing to the absence of two hydrogen bonds between the Ser64 backbone NH and side-chain OH and the carboxylate oxygen of propionate-7, present in the native protein. The analysis of the NMR spectra in the presence of unfolding agents indicates that this protein is less stable than the native form. The decrease in stability may be the result of the loss of the two hydrogen bonds connecting propionate-7 to Ser64 in the native protein. The available data on the reduction potential and the electron transfer rates are discussed on the basis of the present structural data.


Subject(s)
Cytochromes b5/chemistry , Metalloporphyrins/chemistry , Amino Acid Sequence , Cytochromes b5/metabolism , Enzyme Stability , Guanidine/chemistry , Heme/chemistry , Magnetic Resonance Spectroscopy , Magnetics , Metalloporphyrins/metabolism , Molecular Sequence Data , Protein Conformation , Protein Folding
3.
Biochemistry ; 40(8): 2410-8, 2001 Feb 27.
Article in English | MEDLINE | ID: mdl-11327861

ABSTRACT

Firefly luciferase catalyzes the highly efficient emission of yellow-green light from substrate firefly luciferin by a sequence of reactions that require Mg-ATP and molecular oxygen. We had previously developed a working model of the luciferase active site based on the X-ray structure of the enzyme without bound substrates. In our model, the side chain guanidinium group of Arg218 appears to be located in close proximity to the substrate's hydroxyl group at the bottom of the luciferin binding pocket. A similar role for Arg337 also has been proposed. We report here the construction, purification, and characterization of mutant luciferases R218A, R218Q, R218K, R337Q, and R337K. Alteration of the Arg218 side chain produced enzymes with 15-20-fold increases in the Km values for luciferin. The contrasting near-normal Km values for luciferin determined with the Arg337 enzymes support our proposal that Arg218 (and not Arg337) is an essential luciferin binding site residue. Bioluminescence emission studies indicated that in the absence of a positively charged group at position 218, red bioluminescence was produced. Based on this result and those of additional fluorescence experiments, we speculate that Arg218 maintains the polarity and rigidity of the emitter binding site necessary for the normal yellow-green emission of P. pyralis luciferase. The findings reported here are interpreted in the context of the firefly luciferase X-ray structures and computational-based models of the active site.


Subject(s)
Arginine/chemistry , Coleoptera/enzymology , Luciferases/metabolism , Amino Acid Sequence , Animals , Arginine/genetics , Arginine/metabolism , Binding Sites/genetics , Catalysis , Genetic Vectors/chemical synthesis , Genetic Vectors/metabolism , Kinetics , Luciferases/biosynthesis , Luciferases/chemistry , Luciferases/isolation & purification , Luminescent Measurements , Molecular Sequence Data , Mutagenesis, Site-Directed , Oxidation-Reduction , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Substrate Specificity/genetics
4.
Biochemistry ; 39(18): 5433-40, 2000 May 09.
Article in English | MEDLINE | ID: mdl-10820015

ABSTRACT

Firefly luciferase catalyzes the highly efficient emission of yellow-green light from the substrates luciferin, Mg-ATP, and oxygen in a two-step process. The enzyme first catalyzes the adenylation of the carboxylate substrate luciferin with Mg-ATP followed by the oxidation of the acyl-adenylate to the light-emitting oxyluciferin product. The beetle luciferases are members of a large family of nonbioluminescent proteins that catalyze reactions of ATP with carboxylate substrates to form acyl-adenylates. Formation of the luciferase-luciferyl-AMP complex is a specific example of the chemistry common to this enzyme family. Site-directed mutants at positions Lys529, Thr343, and His245 were studied to determine the effects of the amino acid changes at these positions on the individual luciferase-catalyzed adenylation and oxidation reactions. The results suggest that Lys529 is a critical residue for effective substrate orientation and that it provides favorable polar interactions important for transition state stabilization leading to efficient adenylate production. These findings as well as those with the Thr343 and His245 mutants are interpreted in the context of the firefly luciferase X-ray structures and computational-based models of the active site.


Subject(s)
Adenosine Monophosphate/metabolism , Coleoptera/enzymology , Luciferases/chemistry , Lysine/chemistry , Adenosine Triphosphate/metabolism , Animals , Binding Sites , Firefly Luciferin/biosynthesis , Hydrogen Bonding , Kinetics , Luciferases/genetics , Luminescent Measurements , Models, Molecular , Mutagenesis, Site-Directed
6.
Biochemistry ; 38(40): 13223-30, 1999 Oct 05.
Article in English | MEDLINE | ID: mdl-10529195

ABSTRACT

Under physiological conditions firefly luciferase catalyzes the highly efficient emission of yellow-green light from the substrates luciferin, Mg-ATP, and oxygen. In nature, bioluminescence emission by beetle luciferases is observed in colors ranging from green (approximately 530 nm) to red (approximately 635 nm), yet all known luciferases use the same luciferin substrate. In an earlier report [Branchini, B. R., Magyar, R. M., Murtiashaw, M. H., Anderson, S. M., and Zimmer, M. (1998) Biochemistry 37, 15311-15319], we described the effects of mutations at His245 on luciferase activity. In the context of molecular modeling results, we proposed that His245 is located at the luciferase active site. We noted too that the H245 mutants displayed red-shifted bioluminescent emission spectra. We report here the construction and purification of additional His245 mutants, as well as mutants at residues Lys529 and Thr343, all of which are stringently conserved in the beetle luciferase sequences. Analysis of specific activity and steady-state kinetic constants suggested that these residues are involved in luciferase catalysis and the productive binding of substrates. Bioluminescence emission spectroscopy studies indicated that point mutations at His245 and Thr343 produced luciferases that emitted light over the color range from green to red. The results of mutational and biochemical studies with luciferase reported here have enabled us to propose speculative mechanisms for color determination in firefly bioluminescence. An essential role for Thr343, the participation of His245 and Arg218, and the involvement of bound AMP are indicated.


Subject(s)
Amino Acid Substitution/genetics , Coleoptera/enzymology , Insect Proteins/genetics , Luciferases/genetics , Luminescent Measurements , Luminescent Proteins/genetics , Animals , Binding Sites/genetics , Catalysis , Histidine/genetics , Insect Proteins/chemistry , Kinetics , Luciferases/biosynthesis , Luciferases/chemistry , Luciferases/isolation & purification , Luminescent Proteins/chemistry , Lysine/genetics , Models, Biological , Models, Molecular , Mutagenesis, Site-Directed , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Substrate Specificity/genetics , Threonine/genetics
7.
Biochemistry ; 37(44): 15311-9, 1998 Nov 03.
Article in English | MEDLINE | ID: mdl-9799491

ABSTRACT

Firefly luciferase catalyzes the highly efficient emission of yellow-green light from substrate luciferin by a sequence of reactions that require Mg-ATP and molecular oxygen. We previously reported [Branchini, B. R., Magyar, R. A., Marcantonio, K. M., Newberry, K. J., Stroh, J. G., Hinz, L. K., and Murtiashaw, M. H. (1997) J. Biol. Chem. 272, 19359-19364] that 2-(4-benzoylphenyl)thiazole-4-carboxylic acid (BPTC), a firefly luciferin analogue, was a potent photoinactivation reagent for luciferase. We identified a luciferase peptide 244HHGF247, the degradation of which was directly correlated to the photooxidation process. We report here the construction and purification of wild-type and mutant luciferases H244F, H245F, H245A, and H245D. The results of photoinactivation and kinetic and bioluminescence studies with these proteins are consistent with His245 being the primary functional target of BPTC-catalyzed enzyme inactivation. The possibility that His245 is oxidized to aspartate during the photooxidation reaction was supported by the extremely low specific activity ( approximately 300-fold lower than WT) of the H245D mutant. Using the crystal structures of luciferase without substrates [Conti, E., Franks, N. P., and Brick, P. (1996) Structure 4, 287-298] and the functionally related phenylalanine-activating subunit of gramicidin synthetase 1 [Conti, E., Stachelhaus, T., Marahiel, M. A., and Brick, P. (1997) EMBO J. 16, 4174-4183] as a starting point, we have performed molecular-modeling studies and propose here a model for the luciferase active site with substrates luciferin and Mg-ATP bound. We have used this model to provide a structure-based interpretation of the role of 244HHGF247 in firefly bioluminescence.


Subject(s)
Histidine/genetics , Luciferases/genetics , Luciferases/metabolism , Models, Molecular , Mutagenesis, Site-Directed , Amino Acid Substitution/genetics , Animals , Binding Sites/genetics , Carboxylic Acids/metabolism , Catalysis , Coleoptera , Computer Simulation , Histidine/metabolism , Luciferases/antagonists & inhibitors , Luminescent Measurements , Peptide Fragments/chemistry , Peptide Fragments/metabolism , Photolysis , Photosensitizing Agents/metabolism , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification , Substrate Specificity/genetics , Thiazoles/metabolism
8.
J Biol Chem ; 272(31): 19359-64, 1997 Aug 01.
Article in English | MEDLINE | ID: mdl-9235934

ABSTRACT

Firefly luciferase catalyzes the highly efficient emission of yellow-green light from substrate luciferin by a series of reactions that require MgATP and molecular oxygen. We prepared 2-(4-benzoylphenyl)thiazole-4-carboxylic acid (BPTC), a novel benzophenone-based substrate analog, intending to use it in photoaffinity labeling studies to probe the luciferase active site. Instead, we found that while BPTC was a potent photoinactivating reagent for firefly luciferase, it was not a photoaffinity labeling agent. Using proteolysis, reverse phase high-performance liquid chromatography, tandem high performance liquid chromatography-electrospray ionization mass spectrometry, and Edman sequencing, we identified a single luciferase peptide, 244HHGF247, the degradation of which was directly correlated to luciferase photoinactivation. Results of enzyme kinetics and related studies were consistent with this peptide being at or near the luciferin binding site. Further, peptide model studies and additional investigations on the nature of the photoinactivation process strongly suggested that BPTC catalyzed the formation of singlet oxygen at the active site of the enzyme. We describe here an uncommon example of active site-directed photooxidation of an enzyme by singlet oxygen.


Subject(s)
Luciferases/chemistry , Affinity Labels , Animals , Binding Sites , Coleoptera , Luciferases/antagonists & inhibitors , Luciferases/metabolism , Oxidation-Reduction , Photolysis
9.
J Biol Chem ; 272(30): 18766-71, 1997 Jul 25.
Article in English | MEDLINE | ID: mdl-9228050

ABSTRACT

Luciferase (EC 1.13.12.7) from the North American firefly, Photinus pyralis, is widely used as a reporter enzyme in cell biology. One of its distinctive properties is a pronounced susceptibility to proteolytic degradation that causes luciferase to have a very short intracellular half-life. To define the structural basis for this behavior and possibly facilitate the design of more stable forms of luciferase, limited proteolysis studies were undertaken using trypsin and chymotrypsin to identify regions of the protein whose accessible and flexible character rendered them especially sensitive to cleavage. Regions of amino acid sequence 206-220 and 329-341 were found to be sensitive, and because the region around 206-220 had high homology with other luciferases, CoA ligases, and peptidyl synthetases, this region was selected for mutagenesis experiments intended to determine which of its amino acids were essential for activity. Surprisingly, many highly conserved residues including Ser198, Ser201, Thr202, and Gly203 could be mutated with little effect on the luminescent activity of P. pyralis luciferase. One mutation, however, S198T, caused several alterations in enzymatic properties including shifting the pH optimum from 8.1 to 8.7, lowering the Km for Mg-ATP by a factor of 4 and increasing the half-time for light emission decay by a factor of up to 150. While the S198T luciferase was less active than wild type, activity could be restored by the introduction of the additional L194F and N197Y mutations. In addition to indicating the involvement of this region in ATP binding, these results provide a new form of the enzyme that affords a more versatile reporter system.


Subject(s)
Luciferases/genetics , Mutation , Amino Acid Sequence , Animals , Coleoptera , Electrophoresis, Polyacrylamide Gel , Hydrogen-Ion Concentration , Kinetics , Luciferases/chemistry , Luminescent Measurements , Molecular Sequence Data , Sequence Homology, Amino Acid
10.
Arch Biochem Biophys ; 340(1): 52-8, 1997 Apr 01.
Article in English | MEDLINE | ID: mdl-9126276

ABSTRACT

N-Iodoacetyl-N'-(5-sulfo-1-naphthyl)ethylenediamine (I-AEDANS), a fluorescent reagent that selectively modifies cysteine residues, was demonstrated to irreversibly inhibit native Photinus pyralis luciferase purified from firefly lanterns. Complete inactivation of luciferase activity was accompanied by the blockage of all four cysteine thiols and the concomitant incorporation of 4 mol of N-acetyl-N'-(5-sulfo-1-naphthyl)ethylenediamine (AEDANS) per mole of enzyme. Employing proteolytic digestions of AEDANS-labeled luciferase and reverse-phase-high-performance liquid chromatography (RP-HPLC), seven tagged peptides were isolated. The AEDANS label provided a convenient spectroscopic marker for the identification of the modified peptides. The sequences of the labeled peptides were deduced from electrospray ionization mass spectrometry (ESMS) and N-terminal sequencing. The fluorescent peptides included cysteine residues and spanned sequences composed of amino acids Leu78-Lys85, Thr214-Arg218, Asp224-Arg275, and Gly388-Met396. The luciferin substrate provided substantial protection against luciferase inactivation resulting in a 60-67% decrease in the labeling of all four cysteine thiols. Thus, it does not appear that a specific cysteine mediates the loss of luciferase activity. Additional LC/ESMS studies permitted the identification of 78% of the native luciferase molecule, which, unlike the recombinant protein, was found to contain an acetylated N-terminus. The AEDANS labeling results and the identification of well-defined proteolytic fragments should facilitate future structure-function investigations of the firefly luciferases.


Subject(s)
Enzyme Inhibitors/pharmacology , Luciferases/antagonists & inhibitors , Naphthalenesulfonates/pharmacology , Sulfhydryl Reagents/pharmacology , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Animals , Coleoptera/enzymology , Cysteine/chemistry , Firefly Luciferin/metabolism , Molecular Sequence Data , Peptide Mapping , Structure-Activity Relationship , Trypsin
11.
J Biomol Struct Dyn ; 14(4): 441-8, 1997 Feb.
Article in English | MEDLINE | ID: mdl-9172644

ABSTRACT

We propose that heterologous posttranslational chromophore formation in green fluorescent protein (GFP) occurs because the chromophore-forming amino acid residues 65SYG67 are preorganized and activated for imidazolinone ring formation. Based on extensive molecular mechanical conformational searching of the precursor hexapeptide fragment (64FSYGVQ69), we suggest that the presence of low energy conformations characterized by short contacts (approximately 3 A) between the carbonyl carbon of Ser65 and the amide nitrogen of Gly67 accounts for the initial step in posttranslational chromophore formation. Database searches showed that the tight turn required to establish the key short contact is a unique structural motif that is rarely found, except in other FSYG tetrapeptide sequences. Additionally, ab initio calculations demonstrated that an arginine side chain can hydrogen bond to the carbonyl oxygen of Ser65, activating this group for nucleophilic attack by the nearby lone pair of the Gly67 amide nitrogen. We propose that GFP chromophore-formation is initiated by a unique combination of conformational and electronic enhancements, identified by computational methods.


Subject(s)
Luminescent Proteins/chemistry , Protein Conformation , Chemical Phenomena , Chemistry, Physical , Databases, Factual , Green Fluorescent Proteins , Models, Molecular , Peptide Fragments/chemistry
12.
Biol Bull ; 191(3): 393-401, 1996 Dec.
Article in English | MEDLINE | ID: mdl-29215932

ABSTRACT

Post-diapausing gemmules of the freshwater sponge Eunapius fragilis were found to contain sorbitol and glycogen as their primary carbohydrates. The sorbitol probably acts to increase the tolerance of the gemmules to freezing and desiccation. During germination, average sorbitol levels--measured as micromoles of sorbitol per gram of fresh weight of gemmule tissue (µmol/gfw)--declined from a control value of 36 µmol/gfw to about 4 µmol/gfw. Concomitantly, average glycogen levels increased from a control value of 29 µmol/gfw to a steady-state level of 62 µmol/gfw. It is probable that glycogen is being synthesized at the expense of sorbitol. The breakdown of sorbitol was associated with an increase in the activity of sorbitol dehydrogenase from undetectable levels in dormant gemmules to a maximum of 0.2 µmol/ min · mg protein after 30 h of exposure to 20°C. Aldose reductase activity remained constant throughout germination. These data support the hypothesis that the decrease in sorbitol levels is the result of an increase in the rate of catabolism by sorbitol dehydrogenase. The total activity of glycogen synthase did not change during germination; however, the activity of glucose-6-phosphate-dependent glycogen synthase was about 18 times greater than the activity of glucose-6-phosphate-independent glycogen synthase. Total glycogen phosphorylase activity increased from about 1.6 nmol/min.mg protein to 3.6 nmol/min.mg protein during germination. At the same time, however, the percentage of glycogen phosphorylase a decreased from almost 100% to about 84%. This decrease would attenuate the apparent increase in activity. cAMP levels remained constant throughout germination. The observed changes in the level of glycogen in the gemmules are not simply due to changes in the activity of either glycogen phosphorylase or glycogen synthase.

13.
Protein Sci ; 4(12): 2478-86, 1995 Dec.
Article in English | MEDLINE | ID: mdl-8580838

ABSTRACT

The serine-phosphorylated form of histidine-containing protein (HPr), a component of the phosphoenolpyruvate:sugar phosphotransferase system from Bacillus subtilis, has been characterized by NMR spectroscopy and solvent denaturation studies. The results indicate that phosphorylation of Ser 46, the N-cap of alpha-helix-B, does not cause a conformational change but rather stabilizes the helix. Amide proton exchange rates in helix-B are decreased and phosphorylation stabilizes the protein to solvent and thermal denaturation, with a delta delta G of 0.7-0.8 kcal mol-1. A mutant in which Ser 46 is replaced by aspartic acid shows a similar stabilization, indicating that an electrostatic interaction between the negatively charged groups and the helix macrodipole contributes significantly to the stabilization.


Subject(s)
Bacillus subtilis/chemistry , Bacterial Proteins/chemistry , Phosphoserine/metabolism , Amino Acid Sequence , Drug Stability , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Sequence Data , Molecular Structure , Phosphoenolpyruvate Sugar Phosphotransferase System , Phosphorylation , Phosphoserine/chemistry , Protein Structure, Secondary , Thermodynamics
14.
G Ital Cardiol ; 25(5): 561-74, 1995 May.
Article in Italian | MEDLINE | ID: mdl-7642061

ABSTRACT

BACKGROUND: While efficacy of coronary artery bypass surgery in patients with depressed left ventricular function and myocardial ischemia is widely recognized, its results in patients in the absence of clinical evidence of myocardial ischemia remain uncertain. The purpose of this study was to evaluate the effects of coronary revascularization in comparison with conventional medical therapy in subjects with ischemic cardiomyopathy and myocardial ischemia presumed on the basis of angiographic anatomy but not demonstrated by functional testings. METHODS: We selected retrospectively patients who underwent coronary angiography from 1986 trough 1993 and met the following criteria: presence of three-vessel coronary artery disease, occlusion of two and significant luminal narrowing (> or = 50%) of the third major epicardial artery, left ventricular dysfunction (ejection fraction < or = 40%), no angina or presence of mild angina, absence of inducible ischemia on exercise test and, when performed, of redistribution in the vascular territory of the patent vessel. RESULTS: Thirty-one consecutive patients underwent isolated surgical revascularization treatment, while thirty medically treated patients with matched clinical characteristics were selected. Age (61 +/- 10 vs 62 +/- 9), gender (M/F 27/3 vs 24/7), NYHA class I-II (53 vs 62%) or NYHA III-IV (47 vs 38%), incidence of previous infarction (87 vs 94%), number of reversible defects in the vascular territory of the patient vessel on stress scintigraphy (0.6 vs 0.5), patent vessel (right coronary artery 7 vs 10; left circumflex 14 vs 12; left anterior descending 9 vs 9) and left ventricular ejection fraction (28 +/- 8 vs 31 +/- 7), were similar in the two groups (medical vs surgical). Surgically treated patients exhibited a lower proportion of overall cardiac deaths (7/31, 23% vs 19/30, 63%; p < 0.001), and more prolonged survival (67 +/- 9.3 vs 34 +/- 2.5 months; p = 0.04, Mantel and Cox test) than medically treated patients, respectively. The incidence of perioperative myocardial infarction was 10% (3/31). Causes of cardiac death were myocardial ischemia (9/19; 47%), sudden death (5/19; 26%) and heart failure (5/19; 26%) in medical patients, while were surgery (3 cases) and surgery related infection (1 case) (total 4/7; 57%), myocardial ischemia (1/7; 14%), sudden death (1/7; 14%) and heart failure (1/7; 14%) in surgical patients. Cox proportional hazard regression analysis with survival as the dependent variable, identified treatment, surgical or medical, as the best predictor of cardiac events (chi square improvement 9.36, p = 0.002). The next most powerful predictors were NYHA class and ACE-inhibitors treatment (chi square improvement 4.47 and 2.79, respectively). CONCLUSIONS: In patients with left ventricular dysfunction, multivessel coronary artery disease and single patent but stenotic residual vessel, coronary artery bypass grafting appear to offer a better survival than medical therapy, even in the absence of clinically evident myocardial ischemia.


Subject(s)
Coronary Artery Bypass , Coronary Disease/surgery , Ventricular Dysfunction, Left/complications , Aged , Chi-Square Distribution , Coronary Angiography , Coronary Disease/drug therapy , Coronary Disease/mortality , Electrocardiography , Exercise Test , Female , Humans , Male , Middle Aged , Proportional Hazards Models , Retrospective Studies , Survival Rate , Time Factors
15.
Arch Biochem Biophys ; 318(1): 221-30, 1995 Apr 01.
Article in English | MEDLINE | ID: mdl-7726565

ABSTRACT

Using human red blood cell ghost membranes, we have evaluated 5-nitro-2-[N-3-(4-azidophenyl)-propylamino]-benzoic acid and 5-nitro-2-[N-3-(4-azido-2,3,5,6-tetrafluorophenyl)-propylamino]- benzoic acid (FAzNPPB) as photoaffinity labeling agents based on the structure of the widely important Cl- channel blocker 5-nitro-2-(3-phenylpropyl-amino)-benzoic acid (NPPB). The tetrafluoro-substituted aryl azide was found to be a more effective photoinactivating agent than the corresponding protio compound. Using a tritiated version ([3H]FAzNPPB), we demonstrated that photoinactivation of Cl- flux was accompanied by photolabeling of the band 3 protein and membrane lipids. Both processes were diminished in the presence of NPPB and the related arylanthranilate flufenamic acid. Photolabeling resulted in the incorporation of 1.0 +/- 0.2 mol 3H/mol protein in the band 3 integral membrane domain, whereas the cytoplasmic domain was essentially unlabeled. By sodium dodecyl sulfate-polyacrylamide gel electrophoresis, photolabeling was found to be the result of partial labeling of at least three different regions of the membrane domain. Based on trypsin proteolysis, reverse-phase high-performance liquid chromatography and electrospray ionization mass spectrometry analysis, it is proposed that one of the sites of photolabeling is the peptide lys-phe-lys (590-592). FAzNPPB is a successful polyfluoro aryl azide photoaffinity labeling agent which may be of further use in studying the diverse effects of arylanthranilates on biological membranes.


Subject(s)
Affinity Labels/pharmacology , Azides/pharmacology , Chlorides/metabolism , Erythrocyte Membrane/drug effects , Erythrocyte Membrane/metabolism , Nitrobenzoates/pharmacology , Amino Acid Sequence , Anion Exchange Protein 1, Erythrocyte/genetics , Anion Exchange Protein 1, Erythrocyte/metabolism , Binding Sites , Chloride Channels/antagonists & inhibitors , Erythrocyte Membrane/radiation effects , Humans , In Vitro Techniques , Ion Transport/drug effects , Ion Transport/radiation effects , Molecular Sequence Data , Photolysis
16.
Protein Sci ; 1(10): 1363-76, 1992 Oct.
Article in English | MEDLINE | ID: mdl-1303754

ABSTRACT

The solution structure of the phosphocarrier protein, HPr, from Bacillus subtilis has been determined by analysis of two-dimensional (2D) NMR spectra acquired for the unphosphorylated form of the protein. Inverse-detected 2D (1H-15N) heteronuclear multiple quantum correlation nuclear Overhauser effect (HMQC NOESY) and homonuclear Hartmann-Hahn (HOHAHA) spectra utilizing 15N assignments (reported here) as well as previously published 1H assignments were used to identify cross-peaks that are not resolved in 2D homonuclear 1H spectra. Distance constraints derived from NOESY cross-peaks, hydrogen-bonding patterns derived from 1H-2H exchange experiments, and dihedral angle constraints derived from analysis of coupling constants were used for structure calculations using the variable target function algorithm, DIANA. The calculated models were refined by dynamical simulated annealing using the program X-PLOR. The resulting family of structures has a mean backbone rmsd of 0.63 A (N, C alpha, C', O atoms), excluding the segments containing residues 45-59 and 84-88. The structure is comprised of a four-stranded antiparallel beta-sheet with two antiparallel alpha-helices on one side of the sheet. The active-site His 15 residue serves as the N-cap of alpha-helix A, with its N delta 1 atom pointed toward the solvent to accept the phosphoryl group during the phosphotransfer reaction with enzyme I. The existence of a hydrogen bond between the side-chain oxygen atom of Tyr 37 and the amide proton of Ala 56 is suggested, which may account for the observed stabilization of the region that includes the beta-turn comprised of residues 37-40. If the beta alpha beta beta alpha beta (alpha) folding topology of HPr is considered with the peptide chain polarity reversed, the protein fold is identical to that described for another group of beta alpha beta beta alpha beta proteins that include acylphosphatase and the RNA-binding domains of the U1 snRNP A and hnRNP C proteins.


Subject(s)
Bacillus subtilis/chemistry , Bacterial Proteins , Phosphoenolpyruvate Sugar Phosphotransferase System/chemistry , Amino Acid Sequence , Binding Sites , Escherichia coli/chemistry , Hydrogen Bonding , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Sequence Data , Protein Conformation , Solutions
17.
Biochem Biophys Res Commun ; 176(1): 459-65, 1991 Apr 15.
Article in English | MEDLINE | ID: mdl-2018534

ABSTRACT

A photoaffinity analog of the potent epithelial chloride channel blocker 5-nitro-2-(3-phenylpropylamino)-benzoic acid has been synthesized and characterized. In the dark, this reagent, 5-nitro-2-[N-3-(4-azidophenyl)-propylamino]-benzoic acid, and the parent compound reversibly inhibited chloride efflux in human red blood cell ghosts. Irradiation of ghost membranes with 350 microM arylazide analog reduced the rate of chloride efflux to 33% of the control value. The photoinactivation process was not reversed by exhaustive washing of ghost membranes. Covalent incorporation of the photoaffinity reagent was supported by difference ultraviolet spectroscopy, which indicated the attachment of the substituted 2-amino-5-nitrobenzoic acid chromophore to ghost membranes. The novel photolabeling agent described here should be a useful structural probe for chloride channels in erythrocyte membranes and epithelial cells.


Subject(s)
Affinity Labels/chemical synthesis , Azides/chemical synthesis , Chlorides/blood , Erythrocyte Membrane/metabolism , Nitrobenzoates/chemical synthesis , Azides/pharmacology , Darkness , Erythrocyte Membrane/drug effects , Erythrocyte Membrane/radiation effects , Humans , Indicators and Reagents , Kinetics , Light , Magnetic Resonance Spectroscopy , Mass Spectrometry , Molecular Structure , Nitrobenzoates/pharmacology , Spectrophotometry
19.
Photochem Photobiol ; 49(5): 689-95, 1989 May.
Article in English | MEDLINE | ID: mdl-2756004

ABSTRACT

In the course of investigations on the possible involvement of the CIEEL (chemically initiated electron-exchange luminescence) mechanism in firefly bioluminescence, we have synthesized two novel firefly luciferin substrate analogues. D-Naphthylluciferin and D-quinolylluciferin were prepared by condensing D-cysteine with 2-cyano-6-hydroxynaphthalene and 2-cyano-6-hydroxyquinoline, respectively. These analogues are the first examples of bioluminescent substrates for firefly luciferase that do not contain a benzothiazole moiety. Firefly luciferase-catalyzed bioluminescence emission spectra revealed that compared to the normal yellow-green light of luciferin (lambda max = 559 nm), the emission from naphthylluciferin is significantly blue-shifted (lambda max = 524 nm); whereas quinolylluciferin emits orange-red light (lambda max = 608 nm). The fluorescence emission spectra, reaction pH optima, relative light yields, light emission kinetics and KM values of the analogues also were measured and compared to those of luciferin. Neither of the analogues produced the characteristic flash kinetics observed for the natural substrate. Instead, slower rise times to peak emission intensity were recorded. It appears that the formation of an intermediate from the analogue adenylates prior to the addition of oxygen is responsible for the slow rise times. The synthetic substrate analogues described here should be useful for future mechanistic studies.


Subject(s)
Coleoptera/metabolism , Firefly Luciferin/analogs & derivatives , Hydroxyquinolines , Naphthols , Thiazoles , Animals , Luminescence , Spectrum Analysis
20.
Int J Cardiol ; 21(2): 105-10, 1988 Nov.
Article in English | MEDLINE | ID: mdl-3225064

ABSTRACT

Two patients are reported in whom ventricular septal rupture complicated the recovery from surgery for left ventricular free wall rupture. One patient was successfully reoperated upon, but the second died before the diagnosis was obtained. The importance of being aware of the association and of excluding a left ventricular to right ventricular shunt at the time of surgery, or subsequently during clinical deterioration, is discussed.


Subject(s)
Heart Rupture, Post-Infarction/surgery , Heart Rupture/surgery , Heart Septal Defects, Ventricular/surgery , Heart Septum/surgery , Heart Ventricles/surgery , Postoperative Complications/surgery , Aged , Follow-Up Studies , Heart Rupture, Post-Infarction/pathology , Heart Septal Defects, Ventricular/pathology , Heart Septum/pathology , Heart Ventricles/pathology , Humans , Male , Postoperative Complications/pathology , Reoperation
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