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1.
Comp Cytogenet ; 12(1): 1-12, 2018.
Article in English | MEDLINE | ID: mdl-29362669

ABSTRACT

Several cytogenetic markers show chromosomal diversity in the fish such as "armoured catfish". Although studies have characterized many species in the major genera representing these Siluridae, particularly in the genus Hypostomus Lacépède, 1803, trends in chromosome evolution of this group remain unclear. The Paraíba do Sul river basin contains the armoured catfish Hypostomus affinis Steindachner, 1877, which is unique because of its distribution of repetitive DNAs, the 5S and 18S rDNA. Identified samples and registered collections in Brazilian museums were identified as the same typological species, while we observed wide variations in the physical location of this gene in the karyotype based on fluorescent in situ hybridization results. In this study, we propose that these species can represent evolutionarily independent units, as these fish frequently undergo processes such as dispersion and vicariance and that the rDNA is associated with DNA that spreads in the genome, such as transposons. Additionally, the absence of gene flow due to the distance of the sample location could intensify evolutionary processes. The phenotypes found for the 18S rDNA showed minor changes in relation to the number of sites between the lower and upper drainage regions of Paraíba do Sul. The large difference in the number of sites found for the 5S rDNA entered the same region (upper drainage of the basin) and the literature data could represent a population dynamics where an expansion of the 5S rDNA sites provides an extinct or non-sampled cytotype in this work.

2.
Zebrafish ; 13(4): 345-53, 2016 08.
Article in English | MEDLINE | ID: mdl-27148810

ABSTRACT

Comprising a large number of species, the genus Astyanax has been intensively studied by several approaches to elucidate its evolutionary relationships. Such studies have demonstrated that many nominal species are artificial clusters where distinct taxa are grouped under the same denomination. Astyanax aff. fasciatus stands out due to its high karyotypic diversity, since cytogenetic studies have reported three standard cytotypes (2n = 46, 48, and 50), as well as cases of sympatry between cytotypes, variant cytotypes, and B chromosomes. In this study, we attempted to evaluate the reliability of the chromosomal differences in relation to the analysis of the ATPase6/8 mitochondrial DNA (mtDNA) sequence, thereby providing subsidies to the evolutionary reconstruction of this group. Nine populations from four distinct hydrographic basins along Southeastern Brazil were analyzed. These are the first cytogenetic data collected for four of them. Fluorescent in situ hybridization with 5S rDNA probe evidenced the presence of a standard phenotype for the group and the existence of a new arrangement in the individuals from Ribeira de Iguape River. Besides the karyotypic variation, the genetic distance was low among the studied populations and some aspects of the evolutionary relationships among distinct cytotypes/populations could be ascertained by phylogeographic studies. The incipient molecular structuring of certain cytotypes in different hydrographic basins indicates the role of different evolutionary processes on the diversification of the group.


Subject(s)
Characidae/genetics , Evolution, Molecular , Genetic Speciation , Karyotype , Animals , Brazil , Fish Proteins/genetics , In Situ Hybridization, Fluorescence , Mitochondrial Proteins/genetics , Mitochondrial Proton-Translocating ATPases/genetics , Phylogeography
3.
Dev Biol ; 386(2): 340-57, 2014 Feb 15.
Article in English | MEDLINE | ID: mdl-24370451

ABSTRACT

The basic helix-loop-helix (bHLH) transcriptional activator Ptf1a determines inhibitory GABAergic over excitatory glutamatergic neuronal cell fate in progenitors of the vertebrate dorsal spinal cord, cerebellum and retina. In an in situ hybridization expression survey of PR domain containing genes encoding putative chromatin-remodeling zinc finger transcription factors in Xenopus embryos, we identified Prdm13 as a histone methyltransferase belonging to the Ptf1a synexpression group. Gain and loss of Ptf1a function analyses in both frog and mice indicates that Prdm13 is positively regulated by Ptf1a and likely constitutes a direct transcriptional target. We also showed that this regulation requires the formation of the Ptf1a-Rbp-j complex. Prdm13 knockdown in Xenopus embryos and in Ptf1a overexpressing ectodermal explants lead to an upregulation of Tlx3/Hox11L2, which specifies a glutamatergic lineage and a reduction of the GABAergic neuronal marker Pax2. It also leads to an upregulation of Prdm13 transcription, suggesting an autonegative regulation. Conversely, in animal caps, Prdm13 blocks the ability of the bHLH factor Neurog2 to activate Tlx3. Additional gain of function experiments in the chick neural tube confirm that Prdm13 suppresses Tlx3(+)/glutamatergic and induces Pax2(+)/GABAergic neuronal fate. Thus, Prdm13 is a novel crucial component of the Ptf1a regulatory pathway that, by modulating the transcriptional activity of bHLH factors such as Neurog2, controls the balance between GABAergic and glutamatergic neuronal fate in the dorsal and caudal part of the vertebrate neural tube.


Subject(s)
Cell Differentiation/physiology , GABAergic Neurons/physiology , Gene Expression Regulation, Developmental/physiology , Histone-Lysine N-Methyltransferase/metabolism , Neural Tube/embryology , Xenopus Proteins/metabolism , Animals , Basic Helix-Loop-Helix Transcription Factors/metabolism , Chick Embryo , DNA Primers/genetics , Electroporation , Histone Methyltransferases , Histone-Lysine N-Methyltransferase/genetics , Immunohistochemistry , Immunoprecipitation , In Situ Hybridization , Mice , Neural Tube/cytology , PAX2 Transcription Factor/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Xenopus Proteins/genetics , Xenopus laevis
4.
Genet. mol. biol ; 32(3): 477-483, 2009. ilus, mapas, tab
Article in English | LILACS | ID: lil-522315

ABSTRACT

Four populations of Astyanax hastatus Myers 1928 from the Guapimirim River basin (Rio de Janeiro State) were analyzed and three distinct cytotypes identified. These cytotypes presented 2n = 50 chromosomes, with 4M+8SM+10ST+28A (Cytotype A), 8M+10SM+14ST+18A (Cytotype B), 6M+8SM+4ST+32A (Cytotype C) and scanty heterochromatin, mainly located throughout pericentromeric regions of several chromosomal pairs. No homologies with the As-51 satellite DNA were observed in the three cytotypes, although all of them presented multiple 18S rDNA sites, as detected by both silver nitrate staining and FISH (fluorescent in situ hybridization). The application of the term "species complex" in Astyanax is discussed from a cytotaxonomic viewpoint.


Subject(s)
Animals , DNA, Satellite , Fishes/genetics , Cytogenetic Analysis , Heterochromatin , In Situ Hybridization, Fluorescence , Silver Staining , Karyotyping , Fishes/classification
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