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1.
Br J Cancer ; 113(1): 76-82, 2015 Jun 30.
Article in English | MEDLINE | ID: mdl-26057452

ABSTRACT

BACKGROUND: The prediction of therapy response in head and neck squamous cell cancer (HNSCC) requires biomarkers, which are also a prerequisite for personalised therapy concepts. The current study aimed to identify therapy-responsive microRNAs (miRNAs) in the circulation that can serve as minimally invasive prognostic markers for HNSCC patients undergoing radiotherapy. METHODS: We screened plasma miRNAs in a discovery cohort of HNSCC patients before therapy and after treatment. We further compared the plasma miRNAs of the patients to age- and sex-matched healthy controls. All miRNAs identified as biomarker candidates were then confirmed in an independent validation cohort of HNSCC patients and tested for correlation with the clinical outcome. RESULTS: We identified a signature of eight plasma miRNAs that differentiated significantly (P=0.003) between HNSCC patients and healthy donors. MiR-186-5p demonstrated the highest sensitivity and specificity to classify HNSCC patients and healthy individuals. All therapy-responsive and patient-specific miRNAs in plasma were also detectable in tumour tissues derived from the same patients. High expression of miR-142-3p, miR-186-5p, miR-195-5p, miR-374b-5p and miR-574-3p in the plasma correlated with worse prognosis. CONCLUSIONS: Circulating miR-142-3p, miR-186-5p, miR-195-5p, miR-374b-5p and miR-574-3p represent the most promising markers for prognosis and therapy monitoring in the plasma of HNSCC patients. We found strong evidence that the circulating therapy-responsive miRNAs are tumour related and were able to validate them in an independent cohort of HNSCC patients.


Subject(s)
Biomarkers, Tumor/metabolism , Carcinoma, Squamous Cell/therapy , Head and Neck Neoplasms/therapy , MicroRNAs/blood , Aged , Aged, 80 and over , Carcinoma, Squamous Cell/genetics , Cohort Studies , Female , Gene Expression Profiling , Head and Neck Neoplasms/genetics , Humans , Male , MicroRNAs/genetics , Middle Aged , Prognosis
2.
Br J Cancer ; 109(10): 2714-23, 2013 Nov 12.
Article in English | MEDLINE | ID: mdl-24129242

ABSTRACT

BACKGROUND: MiR-221/-222 are frequently overexpressed in breast cancer and are associated with increased malignancy. The specific modification of microRNAs (miRNAs) expression could be a promising strategy in breast cancer therapy, leading to the suppression of tumourigenic processes in tumour cells. METHODS: MiR-221/-222 expressions were analysed in 86 breast cancer tissues by quantitative RT-PCR and tested for correlation with immunohistochemistry data and clinical follow-up. In vitro assays were conducted using human breast cancer cell lines with lentiviral overexpression of miR-221/-222. RESULTS: In tumour tissues, miR-221/-222 were associated with the occurrence of distant metastases. In particular, high levels of miR-221 were revealed to have a high prognostic impact for the identification of significantly different groups with advanced tumours. MiR-221/-222 overexpression strongly increased cell proliferation and invasion in vitro. Following miR-221/-222 overexpression an increased uPAR expression and cell invasion were observed. CONCLUSION: This study demonstrates a significant role for highly expressed miR-221/-222 in advanced breast cancers allowing for the identification of significantly different prognostic groups, particularly for HER2-positive and lymph-node-positive breast cancers. Considering that miR-221/-222 are strongly involved in cell invasion, these miRNAs may be promising markers for breast cancer prognosis and therapy.


Subject(s)
Breast Neoplasms/pathology , MicroRNAs/physiology , Aged , Biomarkers, Tumor/genetics , Breast Neoplasms/genetics , Diagnosis, Differential , Disease Progression , Female , Gene Expression Regulation, Neoplastic/physiology , HEK293 Cells , Humans , Neoplasm Invasiveness , Neoplasm Metastasis , Neoplasm Staging , Prognosis , Tumor Cells, Cultured
3.
Radiat Res ; 180(2): 111-9, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23862692

ABSTRACT

Rapid biodosimetry tools are required to assist with triage in the case of a large-scale radiation incident. Here, we aimed to determine the dose-assessment accuracy of the well-established dicentric chromosome assay (DCA) and cytokinesis-block micronucleus assay (CBMN) in comparison to the emerging γ-H2AX foci and gene expression assays for triage mode biodosimetry and radiation injury assessment. Coded blood samples exposed to 10 X-ray doses (240 kVp, 1 Gy/min) of up to 6.4 Gy were sent to participants for dose estimation. Report times were documented for each laboratory and assay. The mean absolute difference (MAD) of estimated doses relative to the true doses was calculated. We also merged doses into binary dose categories of clinical relevance and examined accuracy, sensitivity and specificity of the assays. Dose estimates were reported by the first laboratories within 0.3-0.4 days of receipt of samples for the γ-H2AX and gene expression assays compared to 2.4 and 4 days for the DCA and CBMN assays, respectively. Irrespective of the assay we found a 2.5-4-fold variation of interlaboratory accuracy per assay and lowest MAD values for the DCA assay (0.16 Gy) followed by CBMN (0.34 Gy), gene expression (0.34 Gy) and γ-H2AX (0.45 Gy) foci assay. Binary categories of dose estimates could be discriminated with equal efficiency for all assays, but at doses ≥1.5 Gy a 10% decrease in efficiency was observed for the foci assay, which was still comparable to the CBMN assay. In conclusion, the DCA has been confirmed as the gold standard biodosimetry method, but in situations where speed and throughput are more important than ultimate accuracy, the emerging rapid molecular assays have the potential to become useful triage tools.


Subject(s)
Biological Assay/methods , Chromosomes, Human/radiation effects , DNA Breaks, Double-Stranded/radiation effects , Histones/metabolism , Laboratory Proficiency Testing , Leukocytes/radiation effects , Micronucleus Tests , Radiometry/methods , Adult , Cells, Cultured/drug effects , Cells, Cultured/radiation effects , Chromosome Aberrations , Cytokinesis/radiation effects , Dose-Response Relationship, Radiation , Gene Expression/radiation effects , Humans , Leukocytes/ultrastructure , Male , Phosphorylation , Protein Processing, Post-Translational , Radiation Injuries/diagnosis , Radiation Injuries/genetics , Radioactive Hazard Release , Reproducibility of Results , Sensitivity and Specificity , Single-Blind Method , Time Factors , Triage/methods
4.
Radiat Res ; 180(2): 129-37, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23862730

ABSTRACT

The study design and obtained results represent an intercomparison of various laboratories performing dose assessment using the dicentric chromosome analysis (DCA) as a diagnostic triage tool for individual radiation dose assessment. Homogenously X-irradiated (240 kVp, 1 Gy/min) blood samples for establishing calibration data (0.25-5 Gy) as well as blind samples (0.1-6.4 Gy) were sent to the participants. DCA was performed according to established protocols. The time taken to report dose estimates was documented for each laboratory. Additional information concerning laboratory organization/characteristics as well as assay performance was collected. The mean absolute difference (MAD) was calculated and radiation doses were merged into four triage categories reflecting clinical aspects to calculate accuracy, sensitivity and specificity. The earliest report time was 2.4 days after sample arrival. DCA dose estimates were reported with high and comparable accuracy, with MAD values ranging between 0.16-0.5 Gy for both manual and automated scoring. No significant differences were found for dose estimates based either on 20, 30, 40 or 50 cells, suggesting that the scored number of cells can be reduced from 50 to 20 without loss of precision of triage dose estimates, at least for homogenous exposure scenarios. Triage categories of clinical significance could be discriminated efficiently using both scoring procedures.


Subject(s)
Biological Assay/methods , Chromosome Aberrations , Chromosomes, Human/radiation effects , Laboratory Proficiency Testing , Leukocytes/radiation effects , Radiometry/methods , Adult , Automation , Calibration , Chromosomes, Human/ultrastructure , Dose-Response Relationship, Radiation , Film Dosimetry , Humans , Leukocytes/ultrastructure , Male , Radiation Injuries/diagnosis , Radiation Injuries/genetics , Radioactive Hazard Release , Reproducibility of Results , Sensitivity and Specificity , Single-Blind Method , Time Factors , Triage/methods
5.
Radiat Res ; 180(2): 120-8, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23862731

ABSTRACT

The focus of the study is an intercomparison of laboratories' dose-assessment performances using the cytokinesis-block micronucleus (CBMN) assay as a diagnostic triage tool for individual radiation dose assessment. Homogenously X-irradiated (240 kVp, 1 Gy/min) blood samples for establishing calibration data (0.25-5 Gy) as well as blind samples (0.1-6.4 Gy) were sent to the participants. The CBMN assay was performed according to protocols individually established and varying among participating laboratories. The time taken to report dose estimates was documented for each laboratory. Additional information concerning laboratory organization/characteristics as well as assay performance was collected. The mean absolute difference (MAD) was calculated and radiation doses were merged into four triage categories reflecting clinical aspects to calculate accuracy, sensitivity and specificity. The earliest report time was 4 days after sample arrival. The CBMN dose estimates were reported with high accuracy (MAD values of 0.20-0.50 Gy at doses below 6.4 Gy for both manual and automated scoring procedures), but showed a limitation of the assay at the dose point of 6.4 Gy, which resulted in a clear dose underestimation in all cases. The MAD values (without 6.4 Gy) differed significantly (P = 0.03) between manual (0.25 Gy, SEM = 0.06, n = 4) or automated scoring procedures (0.37 Gy, SEM = 0.08, n = 5), but lowest MAD were equal (0.2 Gy) for both scoring procedures. Likewise, both scoring procedures led to the same allocation of dose estimates to triage categories of clinical significance (about 83% accuracy and up to 100% specificity).


Subject(s)
Biological Assay/methods , Laboratory Proficiency Testing , Leukocytes/radiation effects , Micronucleus Tests/methods , Radiometry/methods , Adult , Automation , Cells, Cultured/radiation effects , Cells, Cultured/ultrastructure , Cytokinesis/radiation effects , Dose-Response Relationship, Radiation , Humans , Leukocytes/ultrastructure , Male , Radiation Injuries/diagnosis , Radiation Injuries/genetics , Radioactive Hazard Release , Reproducibility of Results , Sensitivity and Specificity , Single-Blind Method , Time Factors , Triage/methods
6.
Radiat Res ; 180(2): 149-55, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23883318

ABSTRACT

The focus of the study is an intercomparison of laboratories' dose-assessment performances using the γ-H2AX foci assay as a diagnostic triage tool for rapid individual radiation dose assessment. Homogenously X-irradiated (240 kVp, 1 Gy/min) blood samples for establishing calibration data (0.25-4 Gy) as well as blinded test samples (0.1-6.4 Gy) were incubated at 37°C for 2 and 24 h (repair time) and sent to the participants. The foci assay was performed according to protocols individually established in participating laboratories and therefore varied. The time taken to report dose estimates was documented for each laboratory. Additional information concerning laboratory organization/characteristics as well as assay performance was collected. The mean absolute difference (MAD) of estimated doses relative to the actual doses was calculated and radiation doses were merged into four triage categories reflecting clinical relevance to calculate accuracy, sensitivity and specificity. First γ-H2AX based dose estimates were reported 7 h after sample receipt. Estimates were similarly accurate for 2 and 24 h repair times, providing scope for its use in the early phase of a radiation exposure incident. Equal accuracy was achieved by scoring 20, 30, 40 or 50 cells per sample. However, MAD values of 0.5-0.7 Gy and 1.3-1.7 Gy divided the data sets into two groups, driven mainly by the considerable differences in foci yields between calibration and blind samples. Foci yields also varied dramatically between laboratories, highlighting reproducibility issues as an important caveat of the foci assay. Nonetheless, foci counts could distinguish high- and low-dose samples in all data sets and binary dose categories of clinical significance could be discriminated with satisfactory accuracy (mean 84%, ±0.03 SEM). Overall, the results suggest that the γ-H2AX assay is a useful tool for rapidly screening individuals for significant exposures that occurred up to at least 24 h earlier, and may help to prioritize cytogenetic dosimetry follow-up.


Subject(s)
Biological Assay/methods , DNA Breaks, Double-Stranded/radiation effects , Histones/metabolism , Laboratory Proficiency Testing , Leukocytes/radiation effects , Protein Processing, Post-Translational/radiation effects , Radiometry/methods , Adult , Calibration , Cells, Cultured/enzymology , Cells, Cultured/radiation effects , Dose-Response Relationship, Radiation , Humans , Leukocytes/enzymology , Male , Phosphorylation/radiation effects , Radiation Injuries/diagnosis , Radiation Injuries/enzymology , Radioactive Hazard Release , Reproducibility of Results , Sensitivity and Specificity , Single-Blind Method , Time Factors , Triage
7.
Radiat Res ; 180(2): 138-48, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23886340

ABSTRACT

The possibility of a large-scale acute radiation exposure necessitates the development of new methods that could provide rapid individual dose estimates with high sample throughput. The focus of the study was an intercomparison of laboratories' dose-assessment performances using gene expression assays. Lithium-heparinized whole blood from one healthy donor was irradiated (240 kVp, 1 Gy/min) immediately after venipuncture at approximately 37°C using single X-ray doses. Blood samples to establish calibration curves (0.25-4 Gy) as well as 10 blinded test samples (0.1-6.4 Gy) were incubated for 24 h at 37°C supplemented with an equal volume of medium and 10% fetal calf serum. For quantitative reverse transcription polymerase chain reaction (qRT-PCR), samples were lysed, stored at -20°C and shipped on ice. For the Chemical Ligation Dependent Probe Amplification methodology (CLPA), aliquots were incubated in 2 ml CLPA reaction buffer (DxTerity), mixed and shipped at room temperature. Assays were run in each laboratory according to locally established protocols. The mean absolute difference (MAD) of estimated doses relative to the true doses (in Gy) was calculated. We also merged doses into binary categories reflecting aspects of clinical/diagnostic relevance and examined accuracy, sensitivity and specificity. The earliest reported time on dose estimates was <8 h. The standard deviation of technical replicate measurements in 75% of all measurements was below 11%. MAD values of 0.3-0.5 Gy and 0.8-1.3 Gy divided the laboratories contributions into two groups. These fourfold differences in accuracy could be primarily explained by unexpected variances of the housekeeping gene (P = 0.0008) and performance differences in processing of calibration and blinded test samples by half of the contributing laboratories. Reported gene expression dose estimates aggregated into binary categories in general showed an accuracies and sensitivities of 93-100% and 76-100% for the groups, with low MAD and high MAD, respectively. In conclusion, gene expression-based dose estimates were reported quickly, and for laboratories with MAD between 0.3-0.5 Gy binary dose categories of clinical significance could be discriminated with an accuracy and sensitivity comparable to established cytogenetic assays.


Subject(s)
Biological Assay/methods , Gene Expression/radiation effects , Laboratory Proficiency Testing , Leukocytes/radiation effects , Nucleic Acid Amplification Techniques/methods , Radiometry/methods , Adult , Dose-Response Relationship, Radiation , Electrophoresis, Capillary/methods , Humans , Leukocytes/ultrastructure , Male , Microspheres , Radiation Injuries/diagnosis , Radiation Injuries/genetics , Radioactive Hazard Release , Reproducibility of Results , Reverse Transcriptase Polymerase Chain Reaction/methods , Sensitivity and Specificity , Single-Blind Method , Time Factors , Triage
8.
Br J Cancer ; 103(5): 663-7, 2010 Aug 24.
Article in English | MEDLINE | ID: mdl-20700126

ABSTRACT

BACKGROUND: Protein tyrosine kinase 6 (PTK6; breast tumour kinase) is overexpressed in up to 86% of the invasive breast cancers, and its association with the oncoprotein human epidermal growth factor receptor 2 (HER2) was shown in vitro by co-precipitation. Furthermore, expression of PTK6 in tumours is linked with the expression of HER2. METHOD AND RESULTS: In this study, we used the proximity ligation assay (PLA) technique on formalin-fixed paraffin sections from eighty invasive breast carcinoma tissue specimens to locate PTK6-HER2 protein-protein complexes. Proximity ligation assay signals from protein complexes were assessed quantitatively, and expression levels showed a statistically significant association with tumour size (P=0.015) and course of the cancer disease (P=0.012). CONCLUSION: Protein tyrosine kinase 6 forms protein complexes with HER2 in primary breast cancer tissues, which can be visualised by use of the PLA technique. Human epidermal growth factor receptor 2-PTK6 complexes are of prognostic relevance.


Subject(s)
Breast Neoplasms/metabolism , Neoplasm Proteins/metabolism , Protein-Tyrosine Kinases/metabolism , Receptor, ErbB-2/metabolism , Breast Neoplasms/pathology , Female , Humans , Paraffin Embedding , Protein Binding
9.
Br J Cancer ; 99(7): 1089-95, 2008 Oct 07.
Article in English | MEDLINE | ID: mdl-18781181

ABSTRACT

The cytoplasmic tyrosine kinase PTK6 (BRK) shows elevated expression in approximately two-thirds of primary breast tumours, and is implicated in EGF receptor-dependent signalling and epithelial tumorigenesis. Using immunohistochemistry, we performed a retrospective study on 426 archival breast cancer samples from patients with long-term follow-up and compared the protein expression levels of PTK6, the HER receptors, Sam68 (a substrate of PTK6), and signalling proteins including MAP kinase (MAPK), phosphorylated MAPK (P-MAPK), and PTEN. We show that PTK6 expression is of significant prognostic value in the outcome of breast carcinomas. In multivariate analysis, the disease-free survival of patients of >or=240 months was directly associated with the protein expression level of PTK6 (P

Subject(s)
Breast Neoplasms/enzymology , Disease-Free Survival , Neoplasm Proteins/metabolism , Protein-Tyrosine Kinases/metabolism , Blotting, Western , Breast Neoplasms/pathology , Female , Humans , Immunohistochemistry , Immunoprecipitation , Phosphorylation , Prognosis , Tissue Array Analysis
10.
Biochem Biophys Res Commun ; 371(4): 694-7, 2008 Jul 11.
Article in English | MEDLINE | ID: mdl-18457664

ABSTRACT

DNA double strand breaks (DSBs) pose a severe hazard to the genome as erroneous rejoining of DSBs can lead to mutation and cancer. Here, we have investigated the correlation between X irradiation-induced gamma-H2AX foci, theoretically induced DSBs, and the minimal number of mis-rejoined DNA breaks (MNB) in irradiated lymphocytes obtained from two healthy humans by painting of the whole chromosome complement by spectral karyotyping. There were less gamma-H2AX foci/dose than theoretically expected, while misrepair, as expressed by MNB/gamma-H2AX focus, was similar at 0.5 and 1Gy but 3.6-fold up at 3Gy. Hence, our results suggest that X-ray-induced gamma-H2AX foci in G0 lymphocyte nuclei contain more than one DSB and that the increasing number of DSBs per gamma-H2AX repair factory lead to an increased rate of misrepair.


Subject(s)
Chromosome Breakage , DNA Breaks, Double-Stranded , DNA Repair , Histones/metabolism , Histones/radiation effects , Cell Nucleus/metabolism , Cell Nucleus/radiation effects , Histones/analysis , Humans , Karyotyping , Lymphocytes/radiation effects , Lymphocytes/ultrastructure , Protein Structure, Tertiary , Resting Phase, Cell Cycle , X-Rays
11.
Oncogene ; 27(33): 4592-602, 2008 Jul 31.
Article in English | MEDLINE | ID: mdl-18408749

ABSTRACT

The aim of this study is to investigate additional genetic alterations in papillary thyroid carcinomas (PTCs) with known RET/PTC rearrangements. We applied array-based comparative genomic hybridization (array CGH) to 33 PTC (20 PTC from adults, 13 post-Chernobyl PTC from children) with known RET/PTC status. Principal component analysis and hierarchical cluster analysis identified cases with similar aberration patterns. Significant deviations between tumour-groups were obtained by statistical testing (Fisher's exact test in combination with Benjamini-Hochberg FDR-controlling procedure). FISH analysis on FFPE sections was applied to validate the array CGH data. Deletions were found more frequently in RET/PTC-positive and RET/PTC-negative tumours than amplifications. Specific aberration signatures were identified that discriminated between RET/PTC-positive and RET/PTC-negative cases (aberrations on chromosomes 1p, 3q, 4p, 7p, 9p/q, 10q, 12q, 13q and 21q). In addition, childhood and adult RET/PTC-positive cases differ significantly for a deletion on the distal part of chromosome 1p. There are additional alterations in RET/PTC-positive tumours, which may act as modifiers of RET activation. In contrast, alterations in RET/PTC-negative tumours indicate alternative routes of tumour development. The data presented serve as a starting point for further studies on gene expression and function of genes identified in this study.


Subject(s)
Carcinoma, Papillary/genetics , Chernobyl Nuclear Accident , Chromosome Aberrations , Chromosomes, Human/genetics , DNA-Binding Proteins/genetics , Neoplasms, Radiation-Induced/genetics , Nuclear Proteins/genetics , Thyroid Neoplasms/genetics , Adolescent , Adult , Child , Female , Humans , In Situ Hybridization, Fluorescence/methods , Male
12.
Radiat Res ; 169(5): 575-83, 2008 May.
Article in English | MEDLINE | ID: mdl-18439037

ABSTRACT

The case for a DNA-damaging action produced by radiofrequency (RF) signals remains controversial despite extensive research. With the advent of the Universal Mobile Telecommunication System (UMTS) the number of RF-radiation-exposed individuals is likely to escalate. Since the epigenetic effects of RF radiation are poorly understood and since the potential modifications of repair efficiency after exposure to known cytotoxic agents such as ionizing radiation have been investigated infrequently thus far, we studied the influence of UMTS exposure on the yield of chromosome aberrations induced by X rays. Human peripheral blood lymphocytes were exposed in vitro to a UMTS signal (frequency carrier of 1.95 GHz) for 24 h at 0.5 and 2.0 W/kg specific absorption rate (SAR) using a previously characterized waveguide system. The frequency of chromosome aberrations was measured on metaphase spreads from cells given 4 Gy of X rays immediately before RF radiation or sham exposures by fluorescence in situ hybridization. Unirradiated controls were RF-radiation- or sham-exposed. No significant variations due to the UMTS exposure were found in the fraction of aberrant cells. However, the frequency of exchanges per cell was affected by the SAR, showing a small but statistically significant increase of 0.11 exchange per cell compared to 0 W/kg SAR. We conclude that, although the 1.95 GHz signal (UMTS modulated) does not exacerbate the yield of aberrant cells caused by ionizing radiation, the overall burden of X-ray-induced chromosomal damage per cell in first-mitosis lymphocytes may be enhanced at 2.0 W/kg SAR. Hence the SAR may either influence the repair of X-ray-induced DNA breaks or alter the cell death pathways of the damage response.


Subject(s)
Cell Phone , Chromosome Aberrations/radiation effects , Lymphocytes/radiation effects , Microwaves/adverse effects , X-Rays/adverse effects , Adult , Cell Death/radiation effects , Cells, Cultured , DNA Repair/radiation effects , Humans , Lymphocytes/cytology , Lymphocytes/metabolism , Male , Models, Biological
13.
Br J Cancer ; 96(5): 801-7, 2007 Mar 12.
Article in English | MEDLINE | ID: mdl-17299391

ABSTRACT

The HER receptors are of therapeutic and prognostic significance in breast cancer, and their function is modulated by cytoplasmic tyrosine kinases like PTK6 (brk). We performed a retrospective study on archival breast cancer samples from patients with long follow-up and compared the protein expression between individual HERs and between HERs and the PTK6. Univariate and multivariate analyses were used to study the prognostic value of parameters. Metastases-free survival of patients for longer than 240 months was inversely associated (P< or =0.05) with nodal status, tumour size, and oestrogen receptor status, but was also directly associated with high protein expression levels of HER4 and PTK6 in Kaplan-Meier analysis. In multivariate analysis for metastases-free survival of >240 months, the stepwise selected parameters were tumour size (relative risk 3.1), PTK6 expression (0.4), and number of positive lymph nodes (1.2). Furthermore, we demonstrated a timedependence of the prognostic value attributed to the parameters. The HER receptors (HER2,4), but not PTK6, were independent prognostic markers for metastases-free survival at 60 months, whereas at 240 months PTK6 is the strongest prognostic marker. We demonstrate that PTK6 is a prognostic marker of metastases-free survival in breast cancer, and is independent of the classical morphological and molecular markers of lymph node involvement, tumour size, and HER2 status.


Subject(s)
Biomarkers, Tumor/analysis , Breast Neoplasms/metabolism , Breast Neoplasms/mortality , ErbB Receptors/biosynthesis , Protein-Tyrosine Kinases/biosynthesis , Disease-Free Survival , Female , Humans , Immunohistochemistry , Receptor, ErbB-2/biosynthesis , Receptor, ErbB-3/biosynthesis , Receptor, ErbB-4 , Retrospective Studies , Survival Analysis , Time Factors , Tissue Array Analysis
14.
Exp Cell Res ; 312(19): 3768-81, 2006 Nov 15.
Article in English | MEDLINE | ID: mdl-17010969

ABSTRACT

Meiosis pairs and segregates homologous chromosomes and thereby forms haploid germ cells to compensate the genome doubling at fertilization. Homologue pairing in many eukaryotic species depends on formation of DNA double strand breaks (DSBs) during early prophase I when telomeres begin to cluster at the nuclear periphery (bouquet stage). By fluorescence in situ hybridization criteria, we observe that mid-preleptotene and bouquet stage frequencies are altered in male mice deficient for proteins required for recombination, ubiquitin conjugation and telomere length control. The generally low frequencies of mid-preleptotene spermatocytes were significantly increased in male mice lacking recombination proteins SPO11, MEI1, MLH1, KU80, ubiquitin conjugating enzyme HR6B, and in mice with only one copy of the telomere length regulator Terf1. The bouquet stage was significantly enriched in Atm(-/-), Spo11(-/-), Mei1(m1Jcs/m1Jcs), Mlh1(-/-), Terf1(+/-) and Hr6b(-/-) spermatogenesis, but not in mice lacking recombination proteins DMC1 and HOP2, the non-homologous end-joining DNA repair factor KU80 and the ATM downstream effector GADD45a. Mice defective in spermiogenesis (Tnp1(-/-), Gmcl1(-/-), Asm(-/-)) showed wild-type mid-preleptotene and bouquet frequencies. A low frequency of bouquet spermatocytes in Spo11(-/-)Atm(-/-) spermatogenesis suggests that DSBs contribute to the Atm(-/-)-correlated bouquet stage exit defect. Insignificant changes of bouquet frequencies in mice with defects in early stages of DSB repair (Dmc1(-/-), Hop2(-/-)) suggest that there is an ATM-specific influence on bouquet stage duration. Altogether, it appears that several pathways influence telomere dynamics in mammalian meiosis.


Subject(s)
Meiosis/genetics , Mutation , Animals , Ataxia Telangiectasia Mutated Proteins , Cell Cycle Proteins/genetics , DNA Breaks, Double-Stranded , DNA Repair , DNA-Binding Proteins/deficiency , DNA-Binding Proteins/genetics , Endodeoxyribonucleases , Esterases/deficiency , Esterases/genetics , In Situ Hybridization, Fluorescence , Male , Mice , Mice, Knockout , Prophase/genetics , Protein Serine-Threonine Kinases/deficiency , Protein Serine-Threonine Kinases/genetics , Recombination, Genetic , Spermatocytes/cytology , Spermatocytes/metabolism , Spermatogenesis/genetics , Telomere/genetics , Tumor Suppressor Proteins/deficiency , Tumor Suppressor Proteins/genetics
15.
Br J Cancer ; 94(10): 1472-7, 2006 May 22.
Article in English | MEDLINE | ID: mdl-16641909

ABSTRACT

Tissue samples from 13 post-Chernobyl childhood thyroid tumours that occurred within a short period of time (4-8 years) after the Chernobyl accident have been investigated by interphase FISH analysis for rearrangements of RET. In all, 77% of cases showed RET/PTC rearrangements and a distinct intratumoural genetic heterogeneity. The data were compared to findings on 32 post-Chernobyl PTCs that occurred after a longer period of time (9-12 years) after the accident. In none of the cases from either group were 100% of cells positive for RET rearrangement. In addition, the pattern of RET-positive cells was different in the two groups (short vs longer latency). A significant clustering of aberrant cells could be detected in the long-latency subgroup, whereas the aberrant cells were more homogeneously distributed among the short-latency tumours. The findings suggest that oligoclonal tumour development occurs in post-Chernobyl PTCs. This pattern of different clones within the tumour appears to become more discrete in cases with longer latencies, suggesting either outgrowth of individual clones or development of later subclones with time.


Subject(s)
Carcinoma, Papillary/genetics , Gene Rearrangement , Neoplasms, Radiation-Induced/genetics , Power Plants , Proto-Oncogene Proteins c-ret/genetics , Radioactive Hazard Release , Thyroid Neoplasms/genetics , Adolescent , Carcinoma, Papillary/pathology , Child , Child, Preschool , Female , Humans , In Situ Hybridization, Fluorescence , Male , Neoplasms, Radiation-Induced/pathology , Thyroid Neoplasms/pathology , Time Factors , Ukraine
16.
Mutat Res ; 578(1-2): 124-33, 2005 Oct 15.
Article in English | MEDLINE | ID: mdl-15963536

ABSTRACT

For a retrospective dose estimation of human exposure to ionising radiation, a partial genome analysis is routinely used to quantify radiation-induced chromosome aberrations. For this purpose, fluorescence in situ hybridisation (FISH) with whole chromosome painting probes for selected chromosomes is usually applied covering about 20% of the whole genome. Since genome-wide screening techniques like spectral karyotyping (SKY) and multiplex FISH (mFISH) have been developed the detection of radiation-induced aberrations within the whole genome has now become feasible. To determine the correspondence between partial and whole genome analysis of radiation-induced chromosome aberrations, they were measured comprehensively in this study using in vitro irradiated blood samples from three donors. We were able to demonstrate that comparable results can be detected with both approaches. However, complex aberrations might be misinterpreted by partial genome analysis. We therefore conclude that whole genome analysis by SKY is useful especially in the high dose range to correct aberration data for complex exchange aberrations.


Subject(s)
Chromosome Aberrations/radiation effects , Genome, Human/radiation effects , In Situ Hybridization, Fluorescence , Spectral Karyotyping , X-Rays , Adult , Chromosomes, Human, Pair 1/radiation effects , Chromosomes, Human, Pair 12/radiation effects , Chromosomes, Human, Pair 4/radiation effects , Female , Humans , Lymphocytes/radiation effects , Male , Mathematics
17.
Cytogenet Genome Res ; 104(1-4): 232-6, 2004.
Article in English | MEDLINE | ID: mdl-15162044

ABSTRACT

Published data concerning the effects of indoor radon exposure on the frequency of chromosome aberrations in peripheral lymphocytes of residents are contradictory. Possible reasons for this may be the low radon concentration in dwellings and/or the limited number of investigated persons. We therefore studied the relationship of domestic radon exposure and the occurrence of chromosome aberrations in peripheral lymphocytes in 61 persons living in houses with radon concentrations from 80 up to 13,000 Bq/m3. We analyzed 60,000 cells from fluorescence plus Giemsa (FPG)-stained slides. It could be clearly demonstrated that in groups of persons living in dwellings with indoor radon concentrations >200 Bq/m3 the number of cells containing dicentrics and/or centric rings (C(dic + cr)) (2.45 +/- 0.50 x 10(-3)) was significantly increased (p < 0.05) in comparison to the control level (1.03 +/- 0.15 x 10(-3)). However, there was no difference in the mean frequency of C(dic + cr) between the groups living in dwellings with higher radon concentrations. Using the fluorescence in situ hybridization (FISH) technique for the detection of translocations, we analyzed 23,315 cells in 16 persons of the highest exposed group (>5,000 Bq/m3). The observed frequency of translocations was 3.9 +/- 0.64 x 10(-3). In comparison to the control group (2.02 +/- 0.18 x 10(-3)), there was a slight but not statistically significant increase in the exposed group (P = 0.055). If, however, the age of the examined persons is taken into account, the values are significantly increased (P < 0.05) in the exposed persons older than 40 years in comparison to the age-matched controls. Since most of the translocations were found in stable cells, it is concluded that translocations are also induced in blood-forming tissue and are transmitted to peripheral blood.


Subject(s)
Chromosome Aberrations , Housing , Lymphocytes/radiation effects , Radon/adverse effects , Adolescent , Adult , Aged , Aged, 80 and over , Bone Marrow/radiation effects , Cells, Cultured/radiation effects , Cells, Cultured/ultrastructure , Child , Female , Hematopoiesis/radiation effects , Humans , In Situ Hybridization, Fluorescence , Lymphocytes/ultrastructure , Male , Middle Aged , Smoking , Translocation, Genetic
18.
Int J Radiat Biol ; 79(6): 393-403, 2003 Jun.
Article in English | MEDLINE | ID: mdl-12963541

ABSTRACT

PURPOSE: To investigate the DNA-proportional distribution of radiation-induced chromosome aberrations for all chromosomes of a male and a female human karyotype. MATERIALS AND METHODS: Metaphases were prepared from whole blood cultures obtained from two healthy donors and set up after irradiation with 3 Gy 220 kV X-rays. Single whole-chromosome FISH painting simultaneously with pancentromeric DNA painting were performed separately for each chromosome of the human karyotype. One thousand exclusively first-division metaphases were analysed per chromosome and donor. After statistical analysis, the data obtained were compared with theoretically expected values. RESULTS: All aberration types (translocations, dicentrics) showed deviations from a DNA-proportional distribution. For both donors, chromosomes 2 and 3 exhibited significantly less and chromosome 4 more symmetrical translocations than expected. Chromosomes 15 and 22 showed more symmetrical translocations than predicted for one of the two donors. Less dicentrics than expected became apparent for chromosomes 2, 3 and 18, while more dicentrics were seen for chromosomes 15, 16 and 17. Moreover, chromosomes 4, 14 and 22 showed a significant deviation from the theoretically expected 1:1 ratio of the yields of symmetrical translocations to the yields of dicentrics. CONCLUSION: The results from the whole-chromosome complement in two different donors confirmed published data from the analysis of single chromosomes that some human chromosomes were not involved in radiation-induced dicentrics and symmetrical translocations proportional to their DNA content. This must be taken into account if chromosome subsets for dose reconstruction are selected or if whole genomic frequencies have to be calculated from partial genome analysis.


Subject(s)
Chromosome Aberrations , Chromosomes, Human/radiation effects , Adult , DNA Damage , Female , Genome, Human , Humans , In Situ Hybridization, Fluorescence , Karyotyping , Male , Metaphase/radiation effects , Models, Statistical , Sex Factors
20.
Int J Radiat Biol ; 77(8): 891-9, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11571023

ABSTRACT

PURPOSE: To determine the instability of microsatellite sequences in post-Chernobyl thyroid tumours from children and young adults, and to ascertain whether they correlated with the age of the patient at the time of the accident and the tumour latency period. MATERIALS AND METHODS: The stability of 26 microsatellite markers was investigated in 122 radiation-associated thyroid tumours (96 children, 26 adults) from Belarus and 39 spontaneous thyroid tumours (adults) from Munich without radiation history. RESULTS: A significant correlation between patient age at the time of the accident and the instability of microsatellite sequences was established. Also, a high instability of microsatellite sequences was found in 28 early thyroid tumours from Belarus with latency periods of 6-8 years, in contrast to a low instability of microsatellites in 94 tumours emerging 9-11 years after the accident. Microsatellite instability in the reference group from Munich proved similar to the early thyroid tumours from Belarus. CONCLUSION: Early, fast-growing and aggressive post-Chernobyl thyroid tumours are characterized by an increase in microsatellite instability.


Subject(s)
Microsatellite Repeats , Neoplasms, Radiation-Induced/genetics , Thyroid Neoplasms/genetics , Adolescent , Adult , Age Factors , Aged , Case-Control Studies , Child , DNA, Neoplasm/genetics , Humans , Middle Aged , Mutation , Neoplasms, Radiation-Induced/etiology , Radioactive Hazard Release , Thyroid Neoplasms/etiology , Time Factors , Ukraine
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