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1.
J Fish Biol ; 91(1): 260-277, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28593636

ABSTRACT

The present study explores the ability of intracellular bacteria within the renal-inter-renal tissue of the winter skate Leucoraja ocellata to metabolize steroids and contribute to the synthesis of the novel elasmobranch corticosteroid, 1α-hydroxycorticosterone (1α-OH-B). Despite the rarity of C1 hydroxylation noted in the original identification of 1α-OH-B, literature provides evidence for steroid C1 hydroxylation by micro-organisms. Eight ureolytic bacterial isolates were identified in the renal-inter-renal tissue of L. ocellata, the latter being the site of 1α-OH-B synthesis. From incubations of bacterial isolates with known amounts of potential 1α-OH-B precursors, one isolate UM008 of the genus Rhodococcus was seen to metabolize corticosteroids and produce novel products via HPLC analysis. Cations Zn2+ and Fe3+ altered metabolism of certain steroid precursors, suggesting inhibition of Rhodococcus steroid catabolism. Genome sequencing of UM008 identified strong sequence and structural homology to that of Rhodococcus erythropolis PR4. A complete enzymatic pathway for steroid-ring oxidation as documented within other Actinobacteria was identified within the UM008 genome. This study highlights the potential role of Rhodococcus bacteria in steroid metabolism and proposes a novel alternative pathway for 1α-OH-B synthesis, suggesting a unique form of mutualism between intracellular bacteria and their elasmobranch host.


Subject(s)
Corticosterone/analogs & derivatives , Corticosterone/biosynthesis , Rhodococcus/metabolism , Skates, Fish/metabolism , Animals , Chromatography, High Pressure Liquid , DNA, Bacterial/isolation & purification , Female , Genome, Bacterial , Kidney/metabolism , Kidney/microbiology , Kidney/ultrastructure , Liver/microbiology , Male , Microscopy, Electron, Transmission , Rhodococcus/genetics , Rhodococcus/ultrastructure , Skates, Fish/genetics , Skates, Fish/microbiology , Steroid Hydroxylases/metabolism , Steroids/metabolism , Urea/metabolism
2.
Transpl Infect Dis ; 11(3): 257-65, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19254325

ABSTRACT

Members of the family Enterobacteriaceae including Klebsiella have re-emerged as major pathogens in solid organ transplantation. The recent appearance and dissemination of carbapenemase-producing Enterobacteriaceae in Europe and the northeastern United States represents a major challenge to the treatment of enteric gram-negative bacterial infections in immunocompromised patients; however, few reports have detailed the outcomes of such infections. Here we report 2 cases of Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella infections in orthotopic liver transplant recipients, which were the index case and initial secondary case for an outbreak of KPC-producing Enterobacteriaceae in our institution. In both instances, the pathogens were initially misidentified as being carbapenem sensitive, the infections recurred after cessation of directed therapy, and the patients ultimately succumbed to their infections.


Subject(s)
Anti-Bacterial Agents/pharmacology , Carbapenems/pharmacology , Cross Infection , Drug Resistance, Bacterial , Klebsiella pneumoniae , Liver Transplantation/adverse effects , Bacterial Proteins/biosynthesis , Cross Infection/diagnosis , Cross Infection/microbiology , Fatal Outcome , Female , Humans , Klebsiella Infections/diagnosis , Klebsiella Infections/microbiology , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/enzymology , Klebsiella pneumoniae/isolation & purification , Male , Middle Aged , beta-Lactamases/biosynthesis
3.
Nucleic Acids Res ; 29(21): 4441-51, 2001 Nov 01.
Article in English | MEDLINE | ID: mdl-11691932

ABSTRACT

The alpha-proteobacterium Caulobacter crescentus possesses a developmental cell cycle that restricts chromosome replication to a stalked cell type. The proposed C.crescentus chromosome replication origin (Cori) lies between hemE and RP001, an unusual intergenic region not previously associated with bacterial replication origins, although a similar genomic arrangement is also present at the putative replication origin in the related bacterium Rickettsia prowazekii. The cloned Cori supports autonomous plasmid replication selectively in the stalked cell type implying that replication of the entire chromosome also initiates between hemE and RP001. To confirm this location, we applied the 2-D (N/N) agarose gel electrophoresis technique to resolve and identify chromosome replication intermediates throughout a 30 kb region spanning Cori. Replication initiation in Cori was uniquely characterized by an 'origin bubble and Y-arc' pattern and this observation was supported by simple replication fork 'Y-arc' patterns that characterized the regions flanking Cori. These replication forks originated bi-directionally from within Cori as determined by the fork direction assay. Therefore, chromosomal replication initiates from the unusual hemE/RP001 intergenic region that we propose represents a new class of replication origins.


Subject(s)
Caulobacter crescentus/genetics , Chromosomes, Bacterial/genetics , DNA Replication , DNA, Bacterial/biosynthesis , DNA, Intergenic/genetics , Replication Origin/genetics , Blotting, Southern , Caulobacter crescentus/cytology , Comet Assay , DNA Methylation , DNA, Bacterial/genetics , DNA, Intergenic/biosynthesis , Genes, Bacterial/genetics , Mutation/genetics , Restriction Mapping
4.
J Bacteriol ; 183(5): 1824-9, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11160121

ABSTRACT

A 30-kb region surrounding the replication origin in Caulobacter crescentus was analyzed. Comparison to the genome sequence of another alpha-proteobacterium, Rickettsia prowazekii, revealed a conserved cluster of genes (RP001, hemE, hemH, and RP883) that overlaps the established origin of replication in C. crescentus and the putative origin of replication in R. prowazekii. The genes flanking this cluster differ between these two organisms. We therefore propose that this conserved gene cluster can be used to identify the origin of replication in other alpha-proteobacteria.


Subject(s)
Caulobacter crescentus/genetics , Genes, Bacterial , Replication Origin/genetics , Rickettsia prowazekii/genetics , Alphaproteobacteria/classification , Alphaproteobacteria/genetics , Base Sequence , Conserved Sequence , Multigene Family , Sequence Analysis, DNA
5.
EMBO J ; 19(4): 702-9, 2000 Feb 15.
Article in English | MEDLINE | ID: mdl-10675339

ABSTRACT

Caulobacter crescentus divides asymmetrically and creates distinct polar membrane surfaces that partition during the cell cycle to distinct cell progeny. Blocking membrane synthesis prevented transcription from selective promoters involved in asymmetric cell division. Transcription from sigma-54-dependent flagellar promoters was blocked completely; however, transcription from the CtrA response regulator-dependent flagellar promoters was activated but reduced. Transcription from the ccrM (DNA methylation) promoter and the che (chemosensory) promoter was also blocked completely. Transcription from a strong promoter at the chromosome replication origin was first stopped then induced by blocked membrane synthesis. We propose a feedback control coupling membrane synthesis to transcription that selectively supports membrane-associated processes such as flagellar assembly, chemosensory biogenesis and chromosome replication.


Subject(s)
Caulobacter crescentus/genetics , Cell Cycle/genetics , Caulobacter crescentus/cytology , Caulobacter crescentus/metabolism , Cell Division , Cell Membrane/metabolism , DNA Methylation , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , Feedback , Flagellin/biosynthesis , Flagellin/genetics , Genes, Bacterial , Glycerolphosphate Dehydrogenase/genetics , Glycerolphosphate Dehydrogenase/metabolism , Operon , Promoter Regions, Genetic , Replication Origin , Site-Specific DNA-Methyltransferase (Adenine-Specific)/genetics , Site-Specific DNA-Methyltransferase (Adenine-Specific)/metabolism , Transcription, Genetic
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