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1.
Community Dent Health ; 38(3): 198-208, 2021 Aug 31.
Article in English | MEDLINE | ID: mdl-34029018

ABSTRACT

OBJECTIVE: To synthesize English or Spanish-language literature on community health workers' (CHWs') roles, training, and impact in oral health. BASIC RESEARCH DESIGN: A scoping review conducted in accordance with the Arksey and O'Malley (2005) methodological framework. METHOD: Electronic literature searches were conducted in Medline (Ovid), Embase (Ovid), DOSS, CINAHL, Web of Science, and Global Health CAB from inception of the databases to April 2020. Three reviewers independently conducted the title and abstract and full-text reviews. This was followed by data charting by three reviewers and data summarizing by two reviewers. RESULTS: Out of the 36 articles that met the inclusion criteria, most took place in the United States (n=15) with most published between 2012 and 2019 (12). CHWs were incorporated in programs that focused on access to dental care (n=10), oral health promotion only (9), early childhood caries (8), oral health promotion and services (5), and oral cancer screening (4). Common roles included providing oral health education and behavior change motivation to community members, facilitating utilization of dental services, and the delivery of diagnostic and dental services to community members. Training and outcomes were not consistently described across studies. CONCLUSION: CHWs have been used in oral health programs and interventions across a wide range of locations and contexts. The implementation and scaling-up of oral health CHW programs requires appropriate provision of training as well as community embedded monitoring and evaluation structures based on rigorous methods with clearly defined outcomes.


Subject(s)
Community Health Workers , Oral Health , Child, Preschool , Global Health , Health Promotion , Humans , United States
2.
J Biol Chem ; 276(44): 41128-32, 2001 Nov 02.
Article in English | MEDLINE | ID: mdl-11518715

ABSTRACT

The association of the bacteriophage T4-encoded AsiA protein with the final sigma(70) subunit of the Escherichia coli RNA polymerase is one of the principal events governing transcription of the T4 genome. Analytical ultracentrifugation and NMR studies indicate that free AsiA is a symmetric dimer and the dimers can exchange subunits. Using NMR, the mutual recognition sites on AsiA and final sigma(70) have been elucidated. Residues throughout the N-terminal half of AsiA are involved either directly or indirectly in binding to final sigma(70) whereas the two highly conserved C-terminal regions of final sigma(70), denoted 4.1 and 4.2, constitute the entire AsiA binding domain. Peptides corresponding to these regions bind tightly to AsiA individually and simultaneously. Simultaneous binding promotes structural changes in AsiA that mimic interaction with the complete AsiA binding determinant of final sigma(70). Moreover, the results suggest that a significant rearrangement of the dimer accompanies peptide binding. Thus, both conserved regions 4.1 and 4.2 are intimately involved in recognition of AsiA by final sigma(70). The interaction of AsiA with 4.1 provides a potential explanation of the differential abilities of DNA and AsiA to bind to free final sigma(70) and a mechanistic alternative to models of AsiA function that rely on binding to a single site on final sigma(70).


Subject(s)
Viral Proteins/metabolism , Amino Acid Sequence , Binding Sites , DNA-Directed RNA Polymerases/chemistry , DNA-Directed RNA Polymerases/metabolism , Dimerization , Escherichia coli/enzymology , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Sigma Factor/chemistry , Sigma Factor/metabolism , Solutions
3.
Res Q Exerc Sport ; 71(2): 162-70, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10925813

ABSTRACT

Force and electromyographic (EMG) activity of the biceps and triceps brachii were measured in 15 strength-trained men during maximal isometric action of the forearm flexors, with the elbow at 90 degrees, following 20-s periods of psyching (PSY), reading aloud (RA), and mental arithmetic (MA). Perceived arousal and attentional focus ratings for PSY were greater than those obtained for RA and MA, which were undifferentiated. Perceived effort, biceps and triceps EMG, and maximal force did not differ across conditions. Therefore, in highly trained men under conditions of brief exertion, when the biomechanics of the muscular action were controlled, psyching resulted in a perception of enhanced readiness but did not influence force or muscular activation differently from psychological states that were preceded by distraction.


Subject(s)
Exercise , Forearm , Isometric Contraction , Muscles/physiology , Adult , Arousal , Electromyography , Humans , Male
4.
J Biotechnol ; 74(1): 5-13, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10943568

ABSTRACT

Aptamers are oligonucleotides derived from an in vitro evolution process called SELEX. Aptamers have been evolved to bind proteins which are associated with a number of disease states. Using this method, many powerful antagonists of such proteins have been found. In order for these antagonists to work in animal models of disease and in humans, it is necessary to modify the aptamers. First of all, sugar modifications of nucleoside triphosphates are necessary to render the resulting aptamers resistant to nucleases found in serum. Changing the 2'OH groups of ribose to 2'F or 2'NH2 groups yields aptamers which are long lived in blood. The relatively low molecular weight of aptamers (8000-12000) leads to rapid clearance from the blood. Aptamers can be kept in the circulation from hours to days by conjugating them to higher molecular weight vehicles. When modified, conjugated aptamers are injected into animals, they inhibit physiological functions known to be associated with their target proteins. A new approach to diagnostics is also described. Aptamer arrays on solid surfaces will become available rapidly because the SELEX protocol has been successfully automated. The use of photo-cross-linkable aptamers will allow the covalent attachment of aptamers to their cognate proteins, with very low backgrounds from other proteins in body fluids. Finally, protein staining with any reagent which distinguishes functional groups of amino acids from those of nucleic acids (and the solid support) will give a direct readout of proteins on the solid support.


Subject(s)
Combinatorial Chemistry Techniques , DNA, Single-Stranded/therapeutic use , Oligonucleotide Array Sequence Analysis , Oligonucleotides/therapeutic use , Animals , Clinical Laboratory Techniques , DNA, Single-Stranded/chemistry , Humans , Oligonucleotides/chemistry
5.
Br J Nutr ; 84 Suppl 1: S39-46, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11242445

ABSTRACT

Biological activity of bovine kappa-caseino glycomacropeptide (GMP) has received much attention in recent years. Research has focused on the ability of GMP to bind cholera and Escherichia coli enterotoxins, inhibit bacterial and viral adhesion, suppress gastric secretions, promote bifidobacterial growth and modulate immune system responses. Of these, protection against toxins, bacteria, and viruses and modulation of the immune system are the most promising applications.


Subject(s)
Glycopeptides/physiology , Amino Acid Sequence , Animals , Anti-Bacterial Agents , Biological Factors/physiology , Caseins/genetics , Cattle , Colostrum/metabolism , Dietary Supplements , Forecasting , Gastric Acid/metabolism , Glycopeptides/genetics , Humans , Inflammation/therapy , Molecular Sequence Data
6.
Ann Pharmacother ; 33(9): 948-51, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10492498

ABSTRACT

OBJECTIVE: To describe a case of procainamide-induced psychosis in an adult treated for atrial fibrillation. CASE SUMMARY: A 45-year-old Native American woman developed acute psychosis within 72 hours of initiating procainamide for atrial fibrillation. Symptoms abated within 24 hours of discontinuing procainamide. Serum procainamide/N-acetylprocainamide concentrations were therapeutic throughout treatment. Sotalol was started without recurrence of symptoms. DISCUSSION: Psychosis is a rare complication of treatment with procainamide, but the exact mechanism for this adverse event is not fully understood. Seven cases implicating procainamide as the cause of acute psychosis are reported in the literature. Cases of psychosis involving other antiarrhythmic agents have also been reported. CONCLUSIONS: Healthcare personnel should be aware of this adverse event related to procainamide and other antiarrhythmic agents.


Subject(s)
Anti-Arrhythmia Agents/adverse effects , Procainamide/adverse effects , Psychoses, Substance-Induced/etiology , Adult , Aged , Anti-Arrhythmia Agents/therapeutic use , Atrial Fibrillation/drug therapy , Female , Humans , Male , Middle Aged , Procainamide/therapeutic use
7.
J Mol Biol ; 291(2): 267-81, 1999 Aug 13.
Article in English | MEDLINE | ID: mdl-10438620

ABSTRACT

In bacterial transcription, diverse sigma-family promoter recognition proteins compete for a common RNA polymerase core. Bacteriophage T4 infection ultimately reduces this competition to a duel between activated viral middle and enhanced late transcription, involving two sigma proteins, two phage-encoded activator proteins and two phage-specific co-activators. This competition has been analyzed in vitro, and the relative abundances in T4-infected Escherichia coli of the participating proteins have been measured. Activated late transcription holds an advantage over activated middle transcription, especially at higher ionic strength. This advantage is further compounded by ADP-ribosylation of the RNA polymerase alpha subunits, and by the phage-specific, RNA polymerase core-bound RpbA subunit. The largest contribution to the middle-late competition is made by gp55, the late sigma factor, but not enough of gp55 is produced during T4 infection to shut off middle transcription by direct competition with sigma(70). AsiA, the originally identified anti-sigma protein is not a major determinant of middle-late competition.


Subject(s)
Bacteriophage T4/genetics , DNA-Directed RNA Polymerases/metabolism , Sigma Factor/metabolism , Transcription, Genetic , Animals , DNA-Binding Proteins/metabolism , Osmolar Concentration , Promoter Regions, Genetic , Rabbits , Templates, Genetic , Trans-Activators/metabolism , Transcription Factors/metabolism , Transcriptional Activation , Viral Proteins/metabolism
8.
Mol Diagn ; 4(4): 381-8, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10671648

ABSTRACT

BACKGROUND: Aptamers are single-stranded oligonucleotides derived from an in vitro evolution protocol called systematic evolution of ligands by exponential enrichment (SELEX). They bind tightly and specifically to target molecules; most aptamers to proteins bind with Kds (equilibrium dissociation constant) in the range of 1 pM to 1 nM. METHODS AND RESULTS: The SELEX protocol has been automated; therefore, hundreds to thousands of aptamers can be made in an economically feasible fashion. Blood and urine can be analyzed on chips that capture and quantitate proteins. SELEX has been adapted to the use of 5-bromo (5-Br) and 5-iodo (5-I) deoxyuridine residues. These halogenated bases can be specifically cross-linked to proteins. Selection pressure during in vitro evolution can be applied for both binding specificity and specific photo-cross-linkability. These are sufficiently independent parameters to allow one reagent, a photo-cross-linkable aptamer, to substitute for two reagents, the capture antibody and the detection antibody, in a typical sandwich array. After a cycle of binding, washing, cross-linking, and detergent washing, proteins will be specifically and covalently linked to their cognate aptamers. CONCLUSIONS: Because no other proteins are present on the chips, protein-specific stain will now show a meaningful array of pixels on the chip. Learning algorithms and retrospective studies should lead to a robust, simple, diagnostic chip.


Subject(s)
Clinical Laboratory Techniques , Combinatorial Chemistry Techniques , Oligonucleotide Array Sequence Analysis , Body Fluids/chemistry , Bromodeoxyuridine , Humans , Idoxuridine , Ligands , Proteins/analysis
9.
Proc Natl Acad Sci U S A ; 95(26): 15247-52, 1998 Dec 22.
Article in English | MEDLINE | ID: mdl-9860954

ABSTRACT

The bacteriophage T4 encodes proteins that are responsible for tightly regulating mRNA synthesis throughout phage development in Escherichia coli. The three classes of T4 promoters (early, middle, and late) are utilized sequentially by the host RNA polymerase as a result of phage-induced modifications. One such modification is the tight binding of the T4 AsiA protein to the sigma70 subunit of the RNA polymerase. This interaction is pivotal for the transition between T4 early and middle transcription, since it both inhibits recognition of host and T4 early promoters and stimulates T4 middle mode synthesis. The activation of T4 middle transcription also requires the T4 MotA protein, bound specifically to its recognition sequence, the "Mot box," which is centered at position -30 of these promoters. Accordingly, the two T4 proteins working in concert are sufficient to effectively switch the transcription specificity of the RNA polymerase holoenzyme. Herein, we investigate the mechanism of transcription activation and report that, while the presence of MotA and AsiA increases the initial recruitment of RNA polymerase to a T4 middle promoter, it does not alter the intrinsic stability of the discrete complexes formed. In addition, we have characterized the RNA polymerase-promoter species by UV laser footprinting and followed their evolution from open into initiating complexes. These data, combined with in vitro transcription assays, indicate that AsiA and MotA facilitate promoter escape, thereby stimulating the production of full-length transcripts.


Subject(s)
Bacterial Proteins/metabolism , Bacteriophage T4/genetics , Bacteriophage T4/metabolism , Escherichia coli/virology , Transcription, Genetic , Viral Proteins/metabolism , Adenosine Triphosphate/metabolism , Cytidine Triphosphate/metabolism , DNA, Viral/genetics , DNA, Viral/metabolism , DNA-Directed RNA Polymerases/metabolism , Escherichia coli/metabolism , Guanosine Triphosphate/metabolism , Kinetics , Promoter Regions, Genetic , RNA, Messenger/genetics , RNA, Viral/genetics , Ultraviolet Rays
10.
Mol Microbiol ; 27(4): 819-29, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9515707

ABSTRACT

The AsiA protein, encoded by bacteriophage T4, inhibits Esigma70-dependent transcription at bacterial and early-phage promoters. We demonstrate that the inhibitory action of AsiA involves interference with the recognition of the -35 consensus promoter sequence by host RNA polymerase. In vitro experiments were performed with a C-terminally labelled sigma factor that is competent for functional holoenzyme reconstitution. By protease and hydroxyl radical protein footprinting, we show that AsiA binds region 4.2 of sigma70, which recognizes the -35 sequence. Direct interference with the recognition of the promoter at this locus is supported by two parallel experiments. The stationary-phase sigma factor containing holoenzyme, which can initiate transcription at promoters devoid of a -35 region, is insensitive to AsiA inhibition. The recognition of a galP1 promoter by Esigma70 is not affected by the presence of AsiA. Therefore, we conclude that AsiA inhibits transcription from Escherichia coli and T4 early promoters by counteracting the recognition of region 4.2 of sigma70 with the -35 hexamer.


Subject(s)
DNA-Directed RNA Polymerases/genetics , DNA-Directed RNA Polymerases/metabolism , Sigma Factor/genetics , Sigma Factor/metabolism , Viral Proteins/metabolism , Amino Acid Sequence , Binding Sites , Conserved Sequence , DNA Footprinting , DNA-Directed RNA Polymerases/chemistry , Deoxyribonuclease I/metabolism , Electrophoresis/methods , Helix-Turn-Helix Motifs , Hydroxyl Radical/metabolism , Molecular Sequence Data , Promoter Regions, Genetic , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Sigma Factor/chemistry , Transcription, Genetic , Viral Proteins/genetics
11.
Med Sci Sports Exerc ; 30(2): 206-14, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9502347

ABSTRACT

Respiratory sinus arrhythmia (RSA) was examined in aerobically trained (AT) and untrained (NT) college-aged males during 12 periods consisting of a 3-min sitting baseline, six common 3-min absolute exercise stages, and five 3-min recovery stages that followed voluntary exhaustion to determine the relationship of work and training status to parasympathetic influence upon the heart. RSA systematically decreased during absolute exercise, was observed at heart rates (HR) above 100 beats x min(-1), and progressively increased during recovery. Additionally, independent of work stages, comparative regression analyses were conducted for both the exercise and recovery phases, separately, in which HR was regressed on RSA, as well as RSA on % VO2max, to contrast the obtained relationships for the AT and NT. No differences were revealed as a function of endurance training status as the slopes and intercepts obtained for the two groups from each of these analyses were similar. The within-subject correlations between RSA and % VO2max, calculated for each of the individuals across all 12 periods, were consistently negative. Between-subjects correlations of RSA with RR and tidal volume were predominantly nonsignificant, indicating that RSA, as measured here, is independent of individual differences in ventilatory activity and, as such, can be compared between groups during exercise. The findings demonstrate that RSA is detectable during both exercise and recovery, even at HR beyond 100 beats x min(-1), and reveals a similar relationship to HR and metabolic state in both aerobically trained and untrained populations.


Subject(s)
Arrhythmia, Sinus/physiopathology , Exercise/physiology , Physical Education and Training , Respiration/physiology , Vagus Nerve/physiology , Adult , Heart Rate/physiology , Humans , Male , Oxygen Consumption/physiology , Physical Fitness/physiology , Regression Analysis
13.
J Biol Chem ; 272(43): 27435-43, 1997 Oct 24.
Article in English | MEDLINE | ID: mdl-9341196

ABSTRACT

The AsiA protein of bacteriophage T4 binds to the sigma70 subunit of Escherichia coli RNA polymerase and plays a dual regulatory role during T4 development: (i) inhibition of host and phage early transcription, and (ii) coactivation of phage middle-mode transcription, which also requires the T4 DNA binding transcriptional activator, MotA. We report that the interaction between AsiA and sigma70 occurs with a 1:1 stoichiometry. When preincubated with RNA polymerase, AsiA is a potent inhibitor of open complex formation at the lac UV5 promoter, whereas it does not perturb preformed open or intermediate promoter complexes. DNase I footprinting and electrophoretic mobility shift analyses of RNA polymerase-DNA complexes formed at the T4 early promoter P15.0 show that AsiA blocks the initial RNA polymerase binding step that leads to the formation of specific closed promoter complexes. A contrasting result is obtained on the T4 middle promoter PrIIB2, where AsiA stimulates the formation of both closed complexes and open complexes. Therefore, we propose that AsiA modulates initial DNA binding by the RNA polymerase, switching promoter usage at the level of closed complex formation.


Subject(s)
DNA-Directed RNA Polymerases/metabolism , Escherichia coli/enzymology , Sigma Factor/metabolism , T-Phages/metabolism , Transcription, Genetic , Viral Proteins/metabolism , Bacterial Proteins/metabolism , DNA Footprinting , DNA-Directed RNA Polymerases/isolation & purification , Deoxyribonuclease I , Kinetics , Macromolecular Substances , Plasmids/metabolism , Promoter Regions, Genetic , Recombinant Fusion Proteins/isolation & purification , Recombinant Fusion Proteins/metabolism , Sigma Factor/isolation & purification , Viral Proteins/isolation & purification
14.
Curr Opin Genet Dev ; 7(6): 848-51, 1997 Dec.
Article in English | MEDLINE | ID: mdl-9468797

ABSTRACT

The interrupted genome structures of complex multicellular organisms have most likely changed the evolution of the regulation of metabolism and development. Wasted intron sequences make regulation of gene expression in (for example) mammals appear to be unnecessarily complicated. The recent discoveries that globular RNA molecules are very much like the antigen-combining sites of antibodies suggest that intronic RNA may be used to help solve the problems raised by this complexity.


Subject(s)
Evolution, Molecular , Genome , Genetic Linkage , Introns , Models, Genetic , Proteins/physiology , RNA/physiology
15.
J Mol Biol ; 263(5): 637-47, 1996 Nov 15.
Article in English | MEDLINE | ID: mdl-8947564

ABSTRACT

We used limited trypsin digestion to determine the domain organization of the Escherichia coli RNA polymerase sigma 70 subunit. Trypsin-resistant fragments containing sigma 70 conserved region 2 (sigma 70(2)), and carboxy-terminal fragments containing conserved regions 3 and 4 (sigma 70(3-4)) were identified by a combination of amino acid sequencing and mass spectrometry. The domains were studied for partial biochemical functions of sigma 70.sigma 70(2) bound core RNA polymerase competitively with intact sigma 70. In contrast to sigma 70(2) alone, the RNA polymerase holoenzyme formed with sigma 70(2) specifically bound a single-stranded DNA oligomer with a sequence corresponding to the non-template strand of the -10 promoter element (the Pribnow box). Sigma 70(2) also forms crystals that are suitable for X-ray analysis. Sigma 70(3-4) bound the T4 AsiA protein with high affinity. The epitope for T4 AsiA on sigma 70 was further localized to within sigma 70[551-608], comprising sigma conserved region 4.2.


Subject(s)
DNA-Directed RNA Polymerases/chemistry , Escherichia coli/enzymology , Sigma Factor/chemistry , Amino Acid Sequence , Bacteriophage T4/metabolism , Binding, Competitive , DNA-Directed RNA Polymerases/metabolism , Molecular Sequence Data , Protein Conformation , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Sigma Factor/metabolism , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Substrate Specificity , Templates, Genetic , Transcription, Genetic , Trypsin/chemistry , Viral Proteins/metabolism
16.
J Nerv Ment Dis ; 184(4): 203-4, 1996 Apr.
Article in English | MEDLINE | ID: mdl-8604028
17.
J Bacteriol ; 178(3): 753-67, 1996 Feb.
Article in English | MEDLINE | ID: mdl-8550510

ABSTRACT

In order to study the Salmonella typhimurium cobalamin biosynthetic pathway, the S. typhimurium cob operon was isolated and cloned into Escherichia coli. This approach has given the new host of the cob operon the ability to make cobalamins de novo, an ability that had probably been lost by this organism. In total, 20 genes of the S. typhimurium cob operon have been transferred into E. coli, and the resulting recombinant strains have been shown to produce up to 100 times more corrin than the parent S. typhimurium strain. These measurements have been performed with a quantitative cobalamin microbiological assay which is detailed in this work. As with S. typhimurium, cobalamin synthesis is only observed in the E. coli cobalamin-producing strains when they are grown under anaerobic conditions. Derivatives of the cobalamin-producing E. coli strains were constructed in which genes of the cob operon were inactivated. These strains, together with S. typhimurium cob mutants, have permitted the determination of the genes necessary for cobalamin production and classification of cbiD and cbiG as cobl genes. When grown in the absence of endogenous cobalt, the oxidized forms of precorrin-2 and precorrin-3, factor II and factor III, respectively, were found to accumulate in the cytosol of the corrin-producing E. coli. Together with the finding that S. typhimurium cbiL mutants are not complemented with the homologous Pseudomonas denitrificans gene, these results lend further credence to the theory that cobalt is required at an early stage in the biosynthesis of cobalamins in S. typhimurium.


Subject(s)
Escherichia coli/metabolism , Genes, Bacterial , Salmonella typhimurium/genetics , Vitamin B 12/biosynthesis , Amino Acid Sequence , Base Sequence , Cobalt/pharmacology , Molecular Sequence Data , Mutation , Salmonella typhimurium/metabolism , Vitamin B 12/analogs & derivatives , Vitamin B 12/analysis
19.
Biochimie ; 78(6): 457-65, 1996.
Article in English | MEDLINE | ID: mdl-8915535

ABSTRACT

Alternative splicing of premessenger RNA (pre-mRNA) is a widespread process used in higher eucaryotes to regulate gene expression. A single primary transcript can generate multiple proteins with distinct functions in a tissue- and/or developmental-specific manner. A central question in alternative splicing concerns the selection of splice sites in different cell environments. In this review, we present our results on the alternative splicing of the chicken beta-tropomyosin gene which provides an interesting model for understanding mechanisms involved in splice site selection. The beta-tropomyosin gene contains in its central portion a pair of exons (6A and 6B) that are used mutually exclusively in a tissue and developmental stage-specific manner. Exon 6A is present in mRNA of non-muscle and smooth muscle tissues while exon 6B is only present in mRNA of skeletal muscle. Regulation of both exons is necessary to ensure specific expression of beta-tropomyosin gene in non-muscle cells. Several cis-acting elements involved in the repression of exon 6B and activation of exon 6A have been identified. In addition, we show that the tissue-specific choice of exon 6A is mediated through interaction with a specific class of splicing factors, the SR proteins. In the last part of this review we will focus on possible mechanisms needed to switch to exon 6B selection in skeletal muscle tissue. We propose that tissue-specific choice of exon 6B involves down regulation of exon 6A and activation of exon 6B. A G-rich enhancer sequence downstream of exon 6B has been defined that is needed for efficient recognition of the exon 6B 5' splice site. Moreover, we suggest that alteration of the ratio between proteins of the SR family contributes to tissue-specific splice site selection.


Subject(s)
RNA Precursors/metabolism , RNA Splicing/genetics , Tropomyosin/genetics , Animals , Chickens , Exons/genetics , Gene Expression Regulation/genetics , Muscle, Skeletal/metabolism , Nucleic Acid Conformation , RNA Processing, Post-Transcriptional/genetics
20.
Nucleic Acids Res ; 23(17): 3419-25, 1995 Sep 11.
Article in English | MEDLINE | ID: mdl-7567451

ABSTRACT

In a patient with a beta-thalassemia intermedia, a mutation was identified in the second intron of the human beta-globin gene. The U-->G mutation is located within the polypyrimidine tract at position -8 upstream of the 3' splice site. In vivo, this mutation leads to decreased levels of the hemoglobin protein. Because of the location of the mutation and the role of the polypyrimidine tract in the splicing process, we performed in vitro splicing assays on the pre-messenger RNA (pre-mRNA). We found that the splicing efficiency of the mutant pre-mRNA is reduced compared to the wild type and that no cryptic splice sites are activated. Analysis of splicing complex formation shows that the U-->G mutation affects predominantly the progression of the H complex towards the pre-spliceosome complex. By cross-linking and immunoprecipitation assays, we show that the hnRNP C protein interacts more efficiently with the mutant precursor than with the wild-type. This stronger interaction could play a role, directly or indirectly, in the decreased splicing efficiency.


Subject(s)
Globins/genetics , Introns , RNA Splicing , Ribonucleoproteins/metabolism , Spliceosomes/metabolism , Base Sequence , DNA-Binding Proteins/metabolism , Heterogeneous-Nuclear Ribonucleoprotein Group C , Heterogeneous-Nuclear Ribonucleoproteins , Humans , In Vitro Techniques , Macromolecular Substances , Molecular Sequence Data , Point Mutation , RNA-Binding Proteins/metabolism , Structure-Activity Relationship
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