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1.
J Appl Microbiol ; 117(5): 1312-27, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25139334

ABSTRACT

AIM: To construct statistical models to predict the presence, abundance and potential virulence of Vibrio vulnificus in surface waters of Chesapeake Bay for implementation in ecological forecasting systems. METHODS AND RESULTS: We evaluated and applied previously published qPCR assays to water samples (n = 1636) collected from Chesapeake Bay from 2007-2010 in conjunction with State water quality monitoring programmes. A variety of statistical techniques were used in concert to identify water quality parameters associated with V. vulnificus presence, abundance and virulence markers in the interest of developing strong predictive models for use in regional oceanographic modeling systems. A suite of models are provided to represent the best model fit and alternatives using environmental variables that allow them to be put to immediate use in current ecological forecasting efforts. CONCLUSIONS: Environmental parameters such as temperature, salinity and turbidity are capable of accurately predicting abundance and distribution of V. vulnificus in Chesapeake Bay. Forcing these empirical models with output from ocean modeling systems allows for spatially explicit forecasts for up to 48 h in the future. SIGNIFICANCE AND IMPACT OF THE STUDY: This study uses one of the largest data sets compiled to model Vibrio in an estuary, enhances our understanding of environmental correlates with abundance, distribution and presence of potentially virulent strains and offers a method to forecast these pathogens that may be replicated in other regions.


Subject(s)
Bays , Models, Statistical , Vibrio vulnificus/isolation & purification , Water Microbiology , Forecasting , Salinity , Temperature , Vibrio vulnificus/genetics , Vibrio vulnificus/pathogenicity , Virulence Factors/genetics
2.
Clin Genet ; 79(6): 531-8, 2011 Jun.
Article in English | MEDLINE | ID: mdl-20662849

ABSTRACT

We report an ~1.3 Mb tandem duplication at Xp11.23p11.3 in an 11-year-old boy with pleasant personality, hyperactivity, learning and visual-spatial difficulties, relative microcephaly, long face, stellate iris pattern, and periorbital fullness. This clinical presentation is milder and distinct from that of patients with partially overlapping Xp11.22p11.23 duplications which have been described in males and females with intellectual disability, language delay, autistic behaviors, and seizures. The duplicated region harbors three known X-linked mental retardation genes: FTSJ1, ZNF81, and SYN1. Quantitative polymerase chain reaction from whole blood total RNA showed increased expression of three genes located in the duplicated region: EBP, WDR13, and ZNF81. Thus, over-expression of genes in the interval may contribute to the observed phenotype. Many of the features seen in this patient are present in individuals with Williams-Beuren syndrome (WBS). Interestingly, the SYN1 gene within the duplicated interval, as well as the STX1A gene, within the WBS critical region, co-localize to presynaptic active zones, and play important roles in neurotransmitter release.


Subject(s)
Abnormalities, Multiple/genetics , Chromosome Duplication , Chromosomes, Human, X/genetics , Cognition Disorders/genetics , Craniofacial Abnormalities/genetics , Mental Disorders/genetics , Adolescent , Adult , Child , Child, Preschool , Comparative Genomic Hybridization , Female , Genes, X-Linked , Humans , Male , Mental Retardation, X-Linked/genetics , Psychomotor Performance , Syndrome , Transcription, Genetic
3.
Am J Med Genet A ; 152A(3): 573-81, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20186804

ABSTRACT

The 22q13.3 deletion syndrome results from loss of terminal segments of varying sizes at 22qter. Few genotype-phenotype correlations have been found but all patients have mental retardation and severe delay, or absence of, expressive speech. We carried out clinical and molecular characterization of 13 patients. Developmental delay and speech abnormalities were common to all and comparable in frequency and severity to previously reported cases. Array-based comparative genomic hybridization showed the deletions to vary from 95 kb to 8.5 Mb. We also carried out high-resolution 244K array comparative genomic hybridization in 10 of 13 patients, that defined the proximal and distal breakpoints of each deletion and helped determine the size, extent, and gene content within the deletion. Two patients had a smaller 95 kb terminal deletion with breakpoints within the SHANK3 gene while three other patients had a similar 5.5 Mb deletion implying the recurrent nature of these deletions. The two largest deletions were found in patients with ring chromosome 22. No correlation could be made with deletion size and phenotype although complete/partial SHANK3 was deleted in all patients. There are very few reports on array comparative genomic hybridization analysis on patients with the 22q13.3 deletion syndrome, and we aim to accurately characterize these patients both clinically and at the molecular level, to pave the way for further genotype-phenotype correlations. (c) 2010 Wiley-Liss, Inc.


Subject(s)
Chromosome Deletion , Chromosomes, Human, Pair 22/genetics , Abnormalities, Multiple/genetics , Adolescent , Autistic Disorder/genetics , Carrier Proteins/genetics , Child , Child, Preschool , Comparative Genomic Hybridization , Developmental Disabilities/genetics , Female , Genetic Association Studies , Humans , Language Development Disorders/genetics , Male , Nerve Tissue Proteins , Phenotype , Syndrome , Young Adult
4.
Ann N Y Acad Sci ; 1061: 173-82, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16467266

ABSTRACT

Spermatogenesis requires progression of germ line stem cells through a precisely ordered differentiation pathway to form spermatozoa. Diverse and dynamic signals from the transforming growth factor-beta (TGF-beta) superfamily influence many stages of germ cell development. For example, interactions between several TGF-beta superfamily ligands (bone morphogenetic proteins, activin, and glial-derived neurotrophic growth factor [GDNF]) appear to govern the onset of spermatogenesis, and we are exploring how germ cells interpret these competing signals. We examined the in vivo impact of activin on testis development using two mouse models, the inhba-/- mouse (which lacks the gene encoding the activin A subunit and dies at birth) and BK mice, with inhbb (encoding the activin betaB subunit) replacing inhba (which survive to adulthood and show delayed fertility onset in males). Distinct effects on Sertoli cell and germ cell populations during fetal and early postnatal development were measured. We recognize that specific proteins, including downstream targets of TGF-beta signals, such as Smads, must move into the nucleus to implement the gene transcription changes required for development. We hypothesized that changes at the level of cellular nuclear transport machinery may be required to mediate this. Examination of proteins involved in classical nuclear import, the importins, revealed that each importin has a developmentally regulated expression pattern in male germ cells. Because each importin binds a selected range of cargo proteins and mediates their nucleocytoplasmic passage, our findings suggest that each importin ferries cargo required for discrete stages of spermatogenesis.


Subject(s)
Spermatogenesis/physiology , Spermatozoa/growth & development , Testis/embryology , Testis/growth & development , Activins/metabolism , Activins/pharmacology , Animals , Biological Transport , Cell Differentiation , Cell Nucleus/metabolism , Gene Expression Regulation, Developmental , Karyopherins/metabolism , Male , Mice , Models, Biological , Signal Transduction , Spermatozoa/physiology , Testis/cytology , Transforming Growth Factor beta/metabolism
5.
Pediatr Blood Cancer ; 44(2): 187-9, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15390361

ABSTRACT

Sotos syndrome is an overgrowth disorder that manifests characteristic dysmorphic features, neurological problems, and an increased risk for cancers and heart defects. Alterations of NSD1 are responsible for this disease. A subset of cases arise from deletions, which is of interest as the factor XII locus lies in close proximity to NSD1. This case report describes an individual with Sotos syndrome and factor XII deficiency, providing a potential link between these two genes and, consequently, expanding the clinical phenotype of Sotos syndrome.


Subject(s)
Abnormalities, Multiple/blood , Craniofacial Abnormalities/blood , Factor XII Deficiency/blood , Gigantism/blood , Child, Preschool , Factor XII/genetics , Histone Methyltransferases , Histone-Lysine N-Methyltransferase , Humans , Intracellular Signaling Peptides and Proteins/genetics , Male , Nuclear Proteins/genetics , Syndrome
6.
Brain ; 126(Pt 3): 590-7, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12566280

ABSTRACT

Neurofilament light chain polypeptide (NEFL) is one of the most abundant cytoskeletal components of the neuron. Mutations in the NEFL gene were recently reported as a cause for autosomal dominant Charcot-Marie-Tooth type 2E (CMT2E) linked to chromosome 8p21. In order to investigate the frequency and phenotypic consequences of NEFL mutations, we screened 323 patients with CMT or related peripheral neuropathies. We detected six disease associated missense mutations and one 3-bp in-frame deletion clustered in functionally defined domains of the NEFL protein. Patients have an early onset and often a severe clinical phenotype. Electrophysiological examination shows moderately to severely slowed nerve conduction velocities. We report the first nerve biopsy of a CMT patient with a de novo missense mutation in NEFL, and found an axonal pathology with axonal regeneration clusters and onion bulb formations. Our findings provide further evidence that the clinical variation observed in CMT depends on the gene mutated and the specific type of mutation, and we also suggest that NEFL mutations need to be considered in the molecular evaluation of patients with sporadic or dominantly inherited CMT.


Subject(s)
Charcot-Marie-Tooth Disease/genetics , Mutation , Neurofilament Proteins/genetics , Adolescent , Axons/pathology , Charcot-Marie-Tooth Disease/pathology , Charcot-Marie-Tooth Disease/physiopathology , Child , Child, Preschool , Electrophysiology , Gene Deletion , Humans , Infant , Microscopy, Electron , Mutation, Missense , Sural Nerve/pathology
7.
J Endocrinol ; 171(3): 403-16, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11739006

ABSTRACT

We have previously demonstrated that overexpression of parathyroid hormone-related protein (PTHrP) in the mammary glands of transgenic mice results in defects in ductal elongation and branching during puberty and in lobuloalveolar development during pregnancy. In addition, we have shown that PTHrP is necessary for the formation of the initial ductal tree during embryonic mammary development. In order to examine the effect of varying the timing of PTHrP overexpression on mammary development, we created tetracycline-regulated, K14-tTA/Tet(O)-PTHrP double transgenic mice. In this report, we document that this 'tet-off' system directs transgene expression to the mammary gland and that it is fully repressed in the presence of tetracycline. Using these mice, we demonstrate that transient overexpression of PTHrP before birth causes defects in ductal branching during puberty and that overexpression of PTHrP during puberty decreases the rate of ductal elongation. Furthermore, we demonstrate that if PTHrP overexpression is initiated after ductal morphogenesis is completed, lobuloalveolar development is unaffected. Finally, we demonstrate that the impairment in ductal elongation caused by PTHrP is associated with an increase in the basal rate of epithelial cell apoptosis in terminal end buds and a failure to increase end bud cell proliferation and decrease apoptosis in response to estrogen and progesterone.


Subject(s)
Mammary Glands, Animal/growth & development , Proteins/physiology , Animals , Apoptosis/physiology , Cell Division/physiology , Embryonic and Fetal Development/physiology , Female , Gene Expression Regulation, Developmental , Mammary Glands, Animal/cytology , Mammary Glands, Animal/embryology , Mice , Mice, Transgenic , Morphogenesis/physiology , Parathyroid Hormone-Related Protein , Phenotype , Proteins/genetics , Tetracycline
8.
Dermatol Surg ; 27(11): 975-8, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11737136

ABSTRACT

BACKGROUND: Over the course of the last three decades Americans have grown more and more fond of "alternative" or homeopathic medical therapies. The explosion of the Internet has made these nontraditional remedies more accessible to the general public. OBJECTIVE: To describe two cases of auto-Mohs through patient self-application of products containing zinc chloride paste. The case of a basal cell carcinoma and the case of a squamous cell carcinoma are described. METHODS: Each of our patients applied a homeopathic paste containing zinc chloride to sites of biopsy-proven skin cancer. RESULTS: At the conclusion of the self-directed therapy in both cases, histopathologic analysis of the site determined no further skin cancer to be present. CONCLUSION: We present and describe two cases of auto-Mohs.


Subject(s)
Carcinoma, Basal Cell/drug therapy , Carcinoma, Squamous Cell/drug therapy , Chlorides/therapeutic use , Materia Medica , Self Medication , Skin Neoplasms/drug therapy , Zinc Compounds/therapeutic use , Administration, Topical , Adult , Chlorides/administration & dosage , Female , Humans , Internet , Male , Middle Aged , Ointments , Zinc Compounds/administration & dosage
10.
Dev Dyn ; 221(4): 380-90, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11500975

ABSTRACT

Cell proliferation and cell movement during early regeneration of zebrafish caudal fins were examined by injecting BrdU and Di-I, respectively. In normal fins of adult fish, a small number of proliferating cells are observed in the epidermis only. Shortly following amputation, epithelial cells covered the wound to form the epidermal cap but did not proliferate. However, by 24 hr, epithelial cells proximal to the level of amputation were strongly labeled with BrdU. Label incorporation was also detected in a few mesenchymal cells. Proliferating cells in the basal epithelial layer were first observed at 48 hr at the level of the newly formed lepidotrichia. At 72 hr, proliferating mesenchymal cells were found distal to the plane of amputation whereas more proximal labeled cells included mainly those located between the lepidotrichia and the basal membrane. When BrdU-injected fins were allowed to regenerate for longer periods, labeled cells were observed in the apical epidermal cap, a location where cells are not thought to proliferate. This result is suggestive of cell migration. Epithelial cells, peripheral to the rays or in the tissue between adjacent rays, were labeled with Di-I and were shown to quickly migrate towards the site of amputation, the cells closer to the wound migrating faster. Amputation also triggered migration of cells of the connective tissue located between the hemirays. Although cell movement was induced up to seven segments proximal from the level of amputation, cells located within two segments from the wound provided the main contribution to the blastema. Thus, cell proliferation and migration contribute to the early regeneration of zebrafish fins.


Subject(s)
Regeneration , Zebrafish/physiology , Animals , Bromodeoxyuridine/metabolism , Bromodeoxyuridine/pharmacology , Carbocyanines/pharmacology , Cell Division , Cell Movement , Epidermis/metabolism , Extremities , Fluorescent Dyes/pharmacology , Time Factors
16.
Nat Genet ; 25(4): 453-7, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10932194

ABSTRACT

The activins (dimers of betaA or betaB subunits, encoded by the genes Inhba and Inhbb, respectively) are TGF-beta superfamily members that have roles in reproduction and development. Whereas mice homozygous for the Inhba-null allele demonstrate disruption of whisker, palate and tooth development, leading to neonatal lethality, homozygous Inhbb-null mice are viable, fertile and have eye defects. To determine if these phenotypes were due to spatiotemporal expression differences of the ligands or disruption of specific ligand-receptor interactions, we replaced the region of Inhba encoding the mature protein with Inhbb, creating the allele Inhbatm2Zuk (hereafter designated InhbaBK). Although the craniofacial phenotypes of the Inhba-null mutation were rescued by the InhbaBK allele, somatic, testicular, genital and hair growth were grossly affected and influenced by the dosage and bioactivity of the allele. Thus, functional compensation within the TGF-beta superfamily can occur if the replacement gene is expressed appropriately. The novel phenotypes in these mice further illustrate the usefulness of insertion strategies for defining protein function.


Subject(s)
Activins , Inhibin-beta Subunits , Inhibins/genetics , Oligopeptides , Peptides/genetics , Alleles , Animals , Body Weight , CHO Cells , Cells, Cultured , Cricetinae , DNA, Recombinant , Embryo, Mammalian/metabolism , Female , Gene Expression Regulation, Developmental , Genotype , In Situ Hybridization , Inhibins/physiology , Male , Mice , Mice, Inbred Strains , Mice, Mutant Strains , Mutagenesis, Insertional , Mutation , Organ Size , Ovary/metabolism , Phenotype , Pregnancy , RNA/genetics , RNA/metabolism , Survival Analysis , Testis/growth & development , Testis/metabolism
17.
Cutis ; 65(6): 363-6, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10879304

ABSTRACT

Molluscum contagiosum is a common cutaneous infection complicating the course of patients afflicted with acquired immunodeficiency syndrome. We describe a human immunodeficiency virus-positive patient with a disfiguring molluscum contagiosum infection of the face. Conventional cytodestructive therapies failed in this patient, but imiquimod 5% cream, an immunomodulator, clinically cleared his cutaneous disease.


Subject(s)
AIDS-Related Opportunistic Infections/drug therapy , Adjuvants, Immunologic/administration & dosage , Aminoquinolines/administration & dosage , Facial Dermatoses/drug therapy , Interferon Inducers/administration & dosage , Molluscum Contagiosum/drug therapy , AIDS-Related Opportunistic Infections/pathology , Administration, Cutaneous , Adult , Facial Dermatoses/pathology , Humans , Imiquimod , Male , Molluscum Contagiosum/pathology
19.
Dermatol Surg ; 26(6): 531-4, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10848932

ABSTRACT

BACKGROUND: Microcystic adnexal carcinoma is an uncommon, locally aggressive cutaneous neoplasm. To date, there are only two reports of histologically proven lymph node involvement with this tumor. We describe a case of a patient with microcystic adnexal carcinoma who developed multiple local metastasis in transit with histologically proven lymph node involvement and was diagnosed with chronic lymphocytic leukemia. OBJECTIVE: To describe the details of our case and to review what is currently known about this tumor. METHODS: Mohs micrographic surgery was utilized for tumor removal. RESULTS: This patient developed multiple tumors of the scalp over the period of a 1 year which were histologically proven to be microcystic adnexal carcinoma. All tumors were noncontiguous and presented on the scalp. During the histologic analysis of the last tumor removed by Mohs micrographic surgery a lymph node was resected which revealed infiltrative microcystic adnexal carcinoma. CONCLUSIONS: We present the case of an immunocompromised patient treated for microcystic adnexal carcinoma with Mohs micrographic surgery who proceeded to develop local metastasis in transit.


Subject(s)
Carcinoma, Skin Appendage/secondary , Immunocompromised Host , Scalp , Skin Diseases/pathology , Skin Neoplasms/pathology , Aged , Aged, 80 and over , Carcinoma, Skin Appendage/pathology , Carcinoma, Skin Appendage/surgery , Humans , Leukemia, Lymphocytic, Chronic, B-Cell/immunology , Lymphatic Metastasis , Male , Mohs Surgery , Skin Diseases/surgery , Skin Neoplasms/surgery
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