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1.
FEMS Microbiol Ecol ; 87(1): 204-16, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24102552

ABSTRACT

To investigate the effect of overfeeding on the ileal and cecal microbiota of two genotypes of ducks (Pekin and Muscovy), high-throughput 16S rRNA gene-based pyrosequencing was used. The ducks were overfed for 12 days with 58% maize flour and 42% maize grain. Samples were collected before the overfeeding period (at 12 weeks), at 13 weeks, at 14 weeks, and 3 h after feeding. In parallel, ducks fed ad libitum were killed at the same ages. Whatever the digestive segment, the genotype, and the level of intake, Firmicutes and Bacteroidetes are the dominant phyla in the bacterial community of ducks (at least 80%). Before overfeeding, ileal samples were dominated by Bacilli, Clostridia, and Bacteroidia classes (≥ 70%), and cecal samples, by Bacteroidia and Clostridia classes (around 90%) in both Pekin and Muscovy ducks. The richness and diversity decreased in the ileum and increased in the ceca after overfeeding. Overfeeding triggers major changes in the ileum, whereas the ceca are less affected. Overfeeding increased the relative abundance of Clostridiaceae, Lactobacillaceae, Streptococcaceae, and Enterococcaceae families in the ileum, whereas genotype affects particularly three families: Lachnospiraceae, Bacteroidaceae, and Desulfovibrionaceae in the ceca.


Subject(s)
Bacteria/isolation & purification , Cecum/microbiology , Ducks/microbiology , Ileum/microbiology , Microbiota , Animal Feed/analysis , Animals , Bacteria/classification , Bacteria/genetics , Biodiversity , Cecum/metabolism , Ducks/genetics , Ducks/metabolism , Genotype , Ileum/metabolism , Phylogeny
2.
Cell Microbiol ; 7(3): 363-71, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15679839

ABSTRACT

Photorhabdus is an entomopathogenic bacterium belonging to the Enterobacteriaceae. The genome of the TT01 strain of Photorhabdus luminescens was recently sequenced and a large number of toxin-encoding genes were found. Genomic analysis predicted the presence on the chromosome of genes encoding a type three secretion system (TTSS), the main role of which is the delivery of effector proteins directly into eukaryotic host cells. We report here the functional characterization of the TTSS. The locus identified encodes the secretion/translocation apparatus, gene expression regulators and an effector protein - LopT - homologous to the Yersinia cysteine protease cytotoxin YopT. Heterologous expression in Yersinia demonstrated that LopT was translocated into mammal cells in an active form, as shown by the appearance of a form of the RhoA GTPase with modified electrophoretic mobility. In vitro study showed that recombinant LopT was able to release RhoA and Rac from human and insect cell membrane. In vivo assays of infection of the cutworm Spodoptera littoralis and the locust Locusta migratoria with a TT01 strain carrying a translational fusion of the lopT gene with the gfp reporter gene revealed that the lopT gene was switched on only at sites of cellular defence reactions, such as nodulation, in insects. TTSS-mutant did not induce nodule formation and underwent phagocytosis by insect macrophage cells, suggesting that the LopT effector plays an essential role in preventing phagocytosis and indicating an unexpected link between TTSS expression and the nodule reaction in insects.


Subject(s)
Bacterial Proteins/physiology , Locusta migratoria/microbiology , Phagocytosis/immunology , Photorhabdus/metabolism , Spodoptera/microbiology , Amino Acid Sequence , Animals , Bacterial Proteins/genetics , Bacterial Proteins/immunology , Cell Membrane/metabolism , Cysteine Endopeptidases/genetics , GTP Phosphohydrolases/metabolism , Genome, Bacterial , Green Fluorescent Proteins/genetics , HeLa Cells , Humans , Locusta migratoria/immunology , Locusta migratoria/ultrastructure , Molecular Sequence Data , Photorhabdus/immunology , Photorhabdus/ultrastructure , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Spodoptera/immunology , Spodoptera/ultrastructure , rhoA GTP-Binding Protein/metabolism
3.
Appl Environ Microbiol ; 70(11): 6473-80, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15528508

ABSTRACT

Bacteria of the genus Xenorhabdus are mutually associated with entomopathogenic nematodes of the genus Steinernema and are pathogenic to a broad spectrum of insects. The nematodes act as vectors, transmitting the bacteria to insect larvae, which die within a few days of infection. We characterized the early stages of bacterial infection in the insects by constructing a constitutive green fluorescent protein (GFP)-labeled Xenorhabdus nematophila strain. We injected the GFP-labeled bacteria into insects and monitored infection. We found that the bacteria had an extracellular life cycle in the hemolymph and rapidly colonized the anterior midgut region in Spodoptera littoralis larvae. Electron microscopy showed that the bacteria occupied the extracellular matrix of connective tissues within the muscle layers of the Spodoptera midgut. We confirmed the existence of such a specific infection site in the natural route of infection by infesting Spodoptera littoralis larvae with nematodes harboring GFP-labeled Xenorhabdus. When the infective juvenile (IJ) nematodes reached the insect gut, the bacterial cells were rapidly released from the intestinal vesicle into the nematode intestine. Xenorhabdus began to escape from the anus of the nematodes when IJs were wedged in the insect intestinal wall toward the insect hemolymph. Following their release into the insect hemocoel, GFP-labeled bacteria were found only in the anterior midgut region and hemolymph of Spodoptera larvae. Comparative infection assays conducted with another insect, Locusta migratoria, also showed early bacterial colonization of connective tissues. This work shows that the extracellular matrix acts as a particular colonization site for X. nematophila within insects.


Subject(s)
Rhabditida/microbiology , Spodoptera/microbiology , Xenorhabdus/growth & development , Xenorhabdus/pathogenicity , Animals , Connective Tissue/microbiology , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hemolymph/microbiology , Intestines/microbiology , Larva/microbiology , Locusta migratoria/microbiology , Microscopy, Electron
4.
J Bacteriol ; 186(13): 4376-81, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15205440

ABSTRACT

Entomopathogenic bacteria of the genus Photorhabdus harbor a type III secretion system. This system was probably acquired prior to the separation of the species within this genus. Furthermore, the core components of the secretion machinery are highly conserved but the predicted effectors differ between Photorhabdus luminescens and P. asymbiotica, two highly related species with different hosts.


Subject(s)
Genome, Bacterial , Photorhabdus/genetics , Base Sequence , Molecular Sequence Data , Photorhabdus/metabolism , Phylogeny
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