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1.
Phytomedicine ; 44: 32-38, 2018 May 15.
Article in English | MEDLINE | ID: mdl-29895490

ABSTRACT

BACKGROUND: Differences in regulatory policies between countries as well as a lack of appropriate standardized methods for the authentication and quality control of herbal products directly impact their quality and safety. Echinacea products are among the top-selling herbal products in Europe and the United States with indications for a broad range of ailments. The increased use of Echinacea species has led to concerns about adulterated products resulting from challenges in morphology-based identification, due to overlapping morphological variation, frequent hybridization between species, and deliberate adulteration. PURPOSE: This study addressed the need for a novel analytical strategy in the authentication of herbal products. METHODS: A combination of high performance thin layer chromatography (HPTLC) and DNA metabarcoding was employed. Fifty-three Echinacea herbal products marketed across Europe were tested to evaluate the accuracy of these methods in plant identification and their potential for detecting substitutes, adulterants and other unreported plant constituents. RESULTS: HPTLC provides high resolution in the detection of Echinacea phytochemical target compounds, but does not offer information on the other species within the product. Alternatively, we showed that the limitation of HPTLC in detecting non-targeted species can be overcome by the complementary use of DNA metabarcoding. Using DNA metabarcoding, Echinacea species were detected in 34 out of the 38 retained products (89%), but with a lack of discriminatory resolution at the species level due to the low level of molecular divergence within the Echinacea genus. All of the tested herbal products showed considerable discrepancies between ingredients listed on the label and the ones detected using DNA metabarcoding, registering an overall ingredient fidelity of only 43%. CONCLUSION: The results confirm that DNA metabarcoding can be used to test for the presence of Echinacea species and simultaneously to detect other species present in even highly processed and multi-ingredient herbal products.


Subject(s)
Chromatography, Thin Layer/methods , DNA Barcoding, Taxonomic/methods , Echinacea/genetics , Plant Preparations/standards , Chromatography, High Pressure Liquid/methods , Drug Contamination , Europe , Plant Preparations/analysis , Plant Preparations/chemistry , Quality Control
2.
Sci Rep ; 7(1): 1291, 2017 May 02.
Article in English | MEDLINE | ID: mdl-28465563

ABSTRACT

Many herbal products have a long history of use, but there are increasing concerns over product efficacy, safety and quality in the wake of recent cases exposing discrepancies between labeling and constituents. When it comes to St. John's wort (Hypericum perforatum L.) herbal products, there is limited oversight, frequent off-label use and insufficient monitoring of adverse drug reactions. In this study, we use amplicon metabarcoding (AMB) to authenticate 78 H. perforatum herbal products and evaluate its ability to detect substitution compared to standard methods using thin-layer chromatography (TLC) and high performance liquid chromatography coupled with mass spectrometry (HPLC-MS). Hypericum perforatum was detected in 68% of the products using AMB. Furthermore, AMB detected incongruence between constituent species and those listed on the label in all products. Neither TLC nor HPLC-MS could be used to unambiguously identify H. perforatum. They are accurate methods for authenticating presence of the target compounds, but have limited efficiency in detecting infrageneric substitution and do not yield any information on other plant ingredients in the products. Random post-marketing AMB of herbal products by regulatory agencies could raise awareness among consumers of substitution and would provide an incentive to manufacturers to increase quality control from raw ingredients to commercialized products.


Subject(s)
DNA Barcoding, Taxonomic/methods , Hypericum/genetics , Plant Extracts/genetics , Quality Control , Chromatography, High Pressure Liquid , Chromatography, Thin Layer , Humans , Hypericum/chemistry , Mass Spectrometry , Plant Extracts/chemistry
3.
Nature ; 506(7486): 47-51, 2014 Feb 06.
Article in English | MEDLINE | ID: mdl-24499916

ABSTRACT

Although it is generally agreed that the Arctic flora is among the youngest and least diverse on Earth, the processes that shaped it are poorly understood. Here we present 50 thousand years (kyr) of Arctic vegetation history, derived from the first large-scale ancient DNA metabarcoding study of circumpolar plant diversity. For this interval we also explore nematode diversity as a proxy for modelling vegetation cover and soil quality, and diets of herbivorous megafaunal mammals, many of which became extinct around 10 kyr bp (before present). For much of the period investigated, Arctic vegetation consisted of dry steppe-tundra dominated by forbs (non-graminoid herbaceous vascular plants). During the Last Glacial Maximum (25-15 kyr bp), diversity declined markedly, although forbs remained dominant. Much changed after 10 kyr bp, with the appearance of moist tundra dominated by woody plants and graminoids. Our analyses indicate that both graminoids and forbs would have featured in megafaunal diets. As such, our findings question the predominance of a Late Quaternary graminoid-dominated Arctic mammoth steppe.


Subject(s)
Biodiversity , Diet , Herbivory , Nematoda , Plants , Animals , Arctic Regions , Bison/physiology , Cold Climate , Freezing , High-Throughput Nucleotide Sequencing , Horses/physiology , Mammoths/physiology , Nematoda/classification , Nematoda/genetics , Nematoda/isolation & purification , Plants/classification , Plants/genetics , Poaceae/genetics , Poaceae/growth & development , Soil , Time Factors , Yukon Territory
4.
Am J Bot ; 99(6): e226-9, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22615303

ABSTRACT

PREMISE OF THE STUDY: Using genomic shotgun 454 sequencing, 50 candidate microsatellite markers were targeted for the arctic-alpine polyploid perennial herb Bistorta vivipara to distinguish between individual genets and ramets within a population. METHODS AND RESULTS: Out of the 50 markers, 31 were polymorphic for seven test samples. We have developed a multiplex protocol for 16 of these microsatellite markers. CONCLUSIONS: Our results show that the microsatellite markers provide a powerful tool for the research on genetic variation of B. vivipara.


Subject(s)
Microsatellite Repeats/genetics , Plant Leaves/genetics , Plant Roots/genetics , Polygonaceae/genetics , DNA, Plant/chemistry , DNA, Plant/genetics , Genetic Variation , Geography , Molecular Sequence Data , Norway , Sequence Analysis, DNA/methods
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