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1.
Heredity (Edinb) ; 131(1): 15-24, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37106116

ABSTRACT

Speciation entails a reduction in gene flow between lineages. The rates at which genomic regions become isolated varies across space and time. Barrier markers are linked to putative genes involved in (processes of) reproductive isolation, and, when observed over two transects, indicate species-wide processes. In contrast, transect-specific putative barrier markers suggest local processes. We studied two widely separated transects along the 900 km hybrid zone between Bufo bufo and B. spinosus, in northern and southern France, for ~1200 RADseq markers. We used genomic and geographic cline analyses to identify barrier markers based on their restricted introgression, and found that some markers are transect-specific, while others are shared between transects. Twenty-six barrier markers were shared across both transects, of which some are clustered in the same chromosomal region, suggesting that their associated genes are involved in reduced gene flow across the entire hybrid zone. Transect-specific barrier markers were twice as numerous in the southern than in the northern transect, suggesting that the overall barrier effect is weaker in northern France. We hypothesize that this is consistent with a longer period of secondary contact in southern France. The smaller number of introgressed genes in the northern transect shows considerably more gene flow towards the southern (B. spinosus) than the northern species (B. bufo). We hypothesize that hybrid zone movement in northern France and hybrid zone stability in southern France explain this pattern. The Bufo hybrid zone provides an excellent opportunity to separate a general barrier effect from localized gene flow-reducing conditions.


Subject(s)
Bufo bufo , Gene Flow , Animals , Bufo bufo/genetics , Chromosomes , Reproductive Isolation , Genome , Hybridization, Genetic
2.
Annu Rev Anim Biosci ; 10: 63-80, 2022 02 15.
Article in English | MEDLINE | ID: mdl-35167315

ABSTRACT

Toxin evolution in animals is one of the most fascinating and complex subjects of scientific inquiry today. Gaining an understanding of toxins poses a multifaceted challenge given the diverse modes of acquisition, evolutionary adaptations, and abiotic components that affect toxin phenotypes. Here, we highlight some of the main genetic and ecological factors that influence toxin evolution and discuss the role of antagonistic interactions and coevolutionary dynamics in shaping the direction and extent of toxicity and resistance in animals. We focus on toxic Pacific newts (family Salamandridae, genus Taricha) as a system to investigate and better evaluate the widely distributed toxin they possess, tetrodotoxin (TTX), and the hypothesized model of arms-race coevolution with snake predators that is used to explain phenotypic patterns of newt toxicity. Finally, we propose an alternative coevolutionary model that incorporates TTX-producing bacteria and draws from an elicitor-receptor concept to explain TTX evolution and ecology.


Subject(s)
Colubridae , Adaptation, Physiological/genetics , Animals , Colubridae/genetics , Humans , Predatory Behavior , Salamandridae , Tetrodotoxin/toxicity
3.
Eur J Surg Oncol ; 32(5): 577-82, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16644177

ABSTRACT

AIMS: To report clinical outcomes of a large series of cases with advanced thyroid cancer. STUDY DESIGN: Three hundred and eighty-five patients at the UICC stages III and IV were selected for the study with thyroid cancer. RESULTS: Papillary carcinoma and sclerosing carcinoma have better survival than the Hürthle cell and insular types. Lymphatic metastasis does not appear to worsen the prognosis. All the tumour forms offer the chance of long survival. CONCLUSIONS: Surgical treatment is the primary treatment of thyroid carcinoma. The combined treatments of surgery, metabolic beam therapy, suppressive hormone therapy, radiotherapy and chemotherapy cure a high percentage of patients with the tumour at an advanced stage.


Subject(s)
Carcinoma/surgery , Thyroid Neoplasms/surgery , Thyroidectomy , Adenocarcinoma/surgery , Adolescent , Adult , Aged , Aged, 80 and over , Antineoplastic Agents, Hormonal/therapeutic use , Carcinoma/pathology , Carcinoma, Papillary/surgery , Chemotherapy, Adjuvant , Female , Follow-Up Studies , Humans , Lymphatic Metastasis/pathology , Male , Middle Aged , Neoadjuvant Therapy , Neoplasm Recurrence, Local/surgery , Neoplasm Staging , Radiotherapy, Adjuvant , Risk Assessment , Survival Rate , Thyroid Neoplasms/pathology , Treatment Outcome
4.
Evolution ; 54(2): 652-9, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10937240

ABSTRACT

Population disjunctions have been proposed to play an important role in speciation processes. In this study, we have examined the possible role of the Pacific Ocean-Sea of Cortez disjunction as a contributing factor to cryptic speciation in a reef fish, the opaleye, Girella nigricans. Mitochondrial control region (D-loop) sequences (380 bp) of 117 individuals completely separated opaleye populations from the Pacific Ocean and the Sea of Cortez. Although opaleye exhibit pelagic larval stages that remain in the water column for several months, gene flow between the Pacific Ocean and the Sea of Cortez was found to be extremely limited (FST = 0.84, Nm = 0.10). Whereas limited gene flow and reciprocal monophyly suggest that the observed physical and genetic disjunction are potentially contributing to the incipient speciation of Pacific and Sea of Cortez opaleye, moderate levels of D-loop sequence divergence (3.3%) and the absence of fixed allozyme markers challenge this idea. Pacific Coast populations also exhibited restricted gene flow levels (FST = 0.25, Nm = 1.49) across Punta Eugenia, a recognized oceanographic boundary along the Baja California coast. Thus, opaleye individuals grouped into three clades: one clade in the Sea of Cortez, one Pacific clade south of Punta Eugenia, and one Pacific clade north of Punta Eugenia. Future work in this region will determine if our results can be generalized to other disjunct populations.


Subject(s)
Fishes/genetics , Animals , Pacific Ocean , Phylogeny , Species Specificity
5.
Mol Phylogenet Evol ; 13(1): 77-81, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10508541

ABSTRACT

Labroid fishes include a variety of families, such as wrasses (Labridae), odacids (Odacidae), damselfishes (Pomacentridae), parrotfishes (Scaridae), cichlids (Cichlidae), and surfperches (Embiotocidae). With only 23 species, the small embiotocid family exhibits a remarkably low species diversity compared to the large species diversity of the Cichlidae. Using mitochondrial DNA sequences of all 14 extant embiotocid genera, we established a molecular phylogeny of the family and compared it with a previously proposed morphological phylogeny. Genetic differentiation among embiotocids was compared to that among cichlids. Although species numbers are extremely different between these two families, the degrees of genetic differentiation within each family was found to be very similar.


Subject(s)
Perches/classification , Perches/genetics , Phylogeny , Animals , Cytochrome b Group/genetics , DNA, Mitochondrial/genetics , DNA, Ribosomal/genetics , Evolution, Molecular , Perciformes/genetics , Species Specificity
6.
Minerva Chir ; 48(3-4): 85-92, 1993 Feb.
Article in Italian | MEDLINE | ID: mdl-8479655

ABSTRACT

Laparoceles are diseases of the abdominal wall and their repair does not usually involve technical problems which are difficult to resolve. The use of classic surgical methods, such as direct suture and plastic surgery, enables the parietal defect to be easily repaired in most case. However, cases do occur in which the surgeon is faced with considerable technical and tactical difficulties largely due to anatomopathological causes: the "loss of the right of domicile" of herniated viscera and the loss of musculo-aponeurotic substance. In the former case it is necessary to prepare the peritoneal cavity using pneumoperitoneum. In the event of the extensive destruction of the muscular component, or when the parietal breech is located next to bone or cartilagenous structures, it is essential to use a prosthesis. The paper goes on to describe the indications for the use of various techniques and their respective methods of use under different anatomo-clinical conditions.


Subject(s)
Hernia, Ventral/surgery , Prostheses and Implants , Abdominal Muscles/surgery , Cardiovascular Diseases/etiology , Female , Hernia, Ventral/complications , Humans , Male , Polyethylene Terephthalates , Polytetrafluoroethylene , Preoperative Care , Respiratory Tract Diseases/etiology , Silicones
7.
Minerva Chir ; 48(1-2): 29-33, 1993 Jan.
Article in Italian | MEDLINE | ID: mdl-8464554

ABSTRACT

Reparative surgery of ventral hernia may be relatively simple or, on the other hand, the surgeon may be confronted with a number of tactical and technical problems. Many of these are caused by the "loss of the right of domicile". In order to avoid this particular condition it is useful to resort to preoperative pneumoperitoneum. This method entails the gradual and progressive introduction of air into the peritoneal cavity. In this way abdominal capacity is increased and it is therefore possible to re-insert all the viscera into their natural cavities avoiding all the harmful consequences for respiratory and cardio-circulatory organs following forced replacement. Preoperative pneumo-peritoneum is a relatively well consolidated surgical technique in large scale eventration. The methods is simple to perform and has a low incidence of complications.


Subject(s)
Hernia, Ventral/surgery , Pneumoperitoneum, Artificial , Female , Humans , Middle Aged , Postoperative Complications/prevention & control , Preoperative Care/methods
8.
Eur J Cancer ; 29A(6): 887-93, 1993.
Article in English | MEDLINE | ID: mdl-8097920

ABSTRACT

Homeobox genes are a network of genes encoding nuclear proteins functioning as transcriptional regulators. Human and murine homeobox genes of the HOX family are organised in four clusters on different chromosomes. Gene order within each cluster is highly conserved, perhaps in direct relation to their expression. Homeobox genes have recently been involved in normal development and oncogenesis. We have analysed HOX gene expression in normal human colon and in primary and metastatic colorectal carcinomas. The majority of HOX genes are active in normal adult colon and their overall expression pattern is characteristic of this organ. Furthermore, the expression of some HOX genes is identical in normal and neoplastic colon indicating that these genes may exert an organ-specific function. In contrast, other HOX genes exhibit altered expression in primary colon cancers and their hepatic metastases which may suggest an association with colon cancer progression.


Subject(s)
Colorectal Neoplasms/genetics , Genes, Homeobox , Colon/chemistry , Gene Expression Regulation, Neoplastic , Humans , Intestinal Mucosa/chemistry , Liver Neoplasms/genetics , Liver Neoplasms/secondary
10.
Int J Cancer ; 51(6): 892-7, 1992 Jul 30.
Article in English | MEDLINE | ID: mdl-1379214

ABSTRACT

As a consequence of transformation, cancer cells generally lose some of their differentiative properties. Thus, alterations interfering with the genetic mechanisms required to maintain embryonic determination could lead to tumorigenesis. Homeobox genes are a network of genes encoding nuclear proteins containing DNA-binding homeodomains that are highly conserved throughout evolution. They are expressed in a stage-related fashion in the developing embryo and, in adult life, in normal tissues. In mice and humans, homeobox genes of the HOX family are organized in 4 clusters on different chromosomes which have presumably evolved by duplication of a primordial gene cluster. Strikingly, the order of genes within each cluster is also highly conserved throughout evolution, suggesting that the physical organization of HOX genes might be essential for their expression. Recent reports indicate that homeobox mutant mice display morphological abnormalities or show neoplastic alterations, and that growth factors can turn on homeobox genes. We have studied the expression of the Antennapedia-like HOX genes in normal human kidney and in renal carcinomas. The great majority of the HOX genes analyzed are expressed in a peculiar manner in normal kidney: blocks of genes, even entire HOX loci, are coordinately regulated. Alterations in HOX gene expression in renal carcinoma can be observed in 2 genes of the HOX-2 locus, HOX-2A and HOX-2E, which are actively expressed in normal kidney and silent in cancer biopsies. The HOX-3H gene is not expressed in normal kidney whereas the HOX-3H transcripts are present in renal carcinomas. Homeobox genes within the 4 HOX loci can be aligned on the basis of the maximal sequence homology of their homeodomains: this alignment defines 13 paralogous gene groups. In renal carcinomas, genes of group 10 (HOX-1D, 2F, 3E, 4B) display a marked difference in their transcript classes when compared to those of normal kidney. Our findings suggest an association between altered HOX gene expression and kidney cancer.


Subject(s)
Carcinoma, Renal Cell/genetics , Genes, Homeobox , Kidney Neoplasms/genetics , Kidney/physiopathology , Multigene Family , Carcinoma, Renal Cell/pathology , Carcinoma, Renal Cell/surgery , Gene Expression , Genetic Variation , Humans , Kidney/pathology , Kidney Neoplasms/pathology , Kidney Neoplasms/surgery , Poly A/genetics , Poly A/isolation & purification , RNA/genetics , RNA/isolation & purification , RNA, Messenger , RNA, Neoplasm/genetics , RNA, Neoplasm/isolation & purification , Transcription, Genetic
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