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1.
Lab Chip ; 16(8): 1383-92, 2016 Apr 21.
Article in English | MEDLINE | ID: mdl-27001545

ABSTRACT

Living bacteria or yeast cells are frequently used as bioreporters for the detection of specific chemical analytes or conditions of sample toxicity. In particular, bacteria or yeast equipped with synthetic gene circuitry that allows the production of a reliable non-cognate signal (e.g., fluorescent protein or bioluminescence) in response to a defined target make robust and flexible analytical platforms. We report here how bacterial cells expressing a fluorescence reporter ("bactosensors"), which are mostly used for batch sample analysis, can be deployed for automated semi-continuous target analysis in a single concise biochip. Escherichia coli-based bactosensor cells were continuously grown in a 13 or 50 nanoliter-volume reactor on a two-layered polydimethylsiloxane-on-glass microfluidic chip. Physiologically active cells were directed from the nl-reactor to a dedicated sample exposure area, where they were concentrated and reacted in 40 minutes with the target chemical by localized emission of the fluorescent reporter signal. We demonstrate the functioning of the bactosensor-chip by the automated detection of 50 µgarsenite-As l(-1) in water on consecutive days and after a one-week constant operation. Best induction of the bactosensors of 6-9-fold to 50 µg l(-1) was found at an apparent dilution rate of 0.12 h(-1) in the 50 nl microreactor. The bactosensor chip principle could be widely applicable to construct automated monitoring devices for a variety of targets in different environments.


Subject(s)
Biosensing Techniques/instrumentation , Lab-On-A-Chip Devices , Automation , Dimethylpolysiloxanes , Equipment Design , Escherichia coli/cytology
2.
Rev Sci Instrum ; 85(1): 015120, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24517825

ABSTRACT

We present a compact portable biosensor to measure arsenic As(III) concentrations in water using Escherichia coli bioreporter cells. Escherichia coli expresses green fluorescent protein in a linearly dependent manner as a function of the arsenic concentration (between 0 and 100 µg/L). The device accommodates a small polydimethylsiloxane microfluidic chip that holds the agarose-encapsulated bacteria, and a complete optical illumination/collection/detection system for automated quantitative fluorescence measurements. The device is capable of sampling water autonomously, controlling the whole measurement, storing and transmitting data over GSM networks. We demonstrate highly reproducible measurements of arsenic in drinking water at 10 and 50 µg/L within 100 and 80 min, respectively.


Subject(s)
Arsenic/analysis , Biosensing Techniques/instrumentation , Escherichia coli/cytology , Microfluidic Analytical Techniques/instrumentation , Water/chemistry , Water Pollutants, Chemical/analysis
3.
Curr Opin Biotechnol ; 24(3): 534-41, 2013 Jun.
Article in English | MEDLINE | ID: mdl-22999825

ABSTRACT

A wide variety of whole cell bioreporter and biosensor assays for arsenic detection has been developed over the past decade. The assays permit flexible detection instrumentation while maintaining excellent method of detection limits in the environmentally relevant range of 10-50 µg arsenite per L and below. New emerging trends focus on genetic rewiring of reporter cells and/or integration into microdevices for more optimal detection. A number of case studies have shown realistic field applicability of bioreporter assays.


Subject(s)
Arsenic/analysis , Biological Assay/methods , Biosensing Techniques/methods , Biotechnology/methods , Arsenites/analysis , Biosensing Techniques/instrumentation
4.
Bioeng Bugs ; 2(5): 296-8, 2011.
Article in English | MEDLINE | ID: mdl-22008638

ABSTRACT

Combining bacterial bioreporters with microfluidics systems holds great promise for in-field detection of chemical or toxicity targets. Recently we showed how Escherichia coli cells engineered to produce a variant of green fluorescent protein after contact to arsenite and arsenate can be encapsulated in agarose beads and incorporated into a microfluidic chip to create a device for in-field detection of arsenic, a contaminant of well known toxicity and carcinogenicity in potable water both in industrialized and developing countries. Cell-beads stored in the microfluidics chip at -20°C retained inducibility up to one month and we were able to reproducibly discriminate concentrations of 10 and 50 µg arsenite per L (the drinking water standards for European countries and the United States, and for the developing countries, respectively) from the blank in less than 200 minutes. We discuss here the reasons for decreasing bioreporter signal development upon increased storage of cell beads but also show how this decrease can be reduced, leading to a faster detection and a longer lifetime of the device.


Subject(s)
Arsenic/analysis , Biosensing Techniques/methods , Escherichia coli/metabolism , Microfluidics/methods , Water Pollutants, Chemical/analysis , Arsenic/metabolism , Biosensing Techniques/instrumentation , Escherichia coli/chemistry , Escherichia coli/genetics , Microfluidics/instrumentation , Water Pollutants, Chemical/metabolism , Water Supply
5.
Lab Chip ; 11(14): 2369-77, 2011 Jul 21.
Article in English | MEDLINE | ID: mdl-21614381

ABSTRACT

Contamination with arsenic is a recurring problem in both industrialized and developing countries. Drinking water supplies for large populations can have concentrations much higher than the permissible levels (for most European countries and the United States, 10 µg As per L; elsewhere, 50 µg As per L). Arsenic analysis requires high-end instruments, which are largely unavailable in developing countries. Bioassays based on genetically engineered bacteria have been proposed as suitable alternatives but such tests would profit from better standardization and direct incorporation into sensing devices. The goal of this work was to develop and test microfluidic devices in which bacterial bioreporters could be embedded, exposed and reporter signals detected, as a further step towards a complete miniaturized bacterial biosensor. The signal element in the biosensor is a nonpathogenic laboratory strain of Escherichia coli, which produces a variant of the green fluorescent protein after contact to arsenite and arsenate. E. coli bioreporter cells were encapsulated in agarose beads and incorporated into a microfluidic device where they were captured in 500 × 500 µm(2) cages and exposed to aqueous samples containing arsenic. Cell-beads frozen at -20 °C in the microfluidic chip retained inducibility for up to a month and arsenic samples with 10 or 50 µg L(-1) could be reproducibly discriminated from the blank. In the 0-50 µg L(-1) range and with an exposure time of 200 minutes, the rate of signal increase was linearly proportional to the arsenic concentration. The time needed to reliably and reproducibly detect a concentration of 50 µg L(-1) was 75-120 minutes, and 120-180 minutes for a concentration of 10 µg L(-1).


Subject(s)
Arsenites/analysis , Biosensing Techniques/methods , Escherichia coli/metabolism , Microfluidic Analytical Techniques/instrumentation , Sepharose/chemistry , Arsenates/analysis , Biosensing Techniques/instrumentation , Capsules/chemistry , Cells, Immobilized/drug effects , Cells, Immobilized/metabolism , Escherichia coli/drug effects , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Microfluidic Analytical Techniques/methods , Microscopy, Fluorescence , Water Supply/analysis
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