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1.
Biochemistry ; 39(46): 14075-81, 2000 Nov 21.
Article in English | MEDLINE | ID: mdl-11087354

ABSTRACT

Monocyte chemotactic protein 2 (MCP-2) is a CC chemokine that utilizes multiple cellular receptors to attract and activate human leukocytes. MCP-2 is a potent inhibitor of HIV-1 by virtue of its high-affinity binding to the receptor CCR5, one of the major coreceptors for HIV-1. Although a few structures of CC chemokines have been reported, none of these was determined with the N-terminal pyroglutamic acid residue (pGlu1) and a complete C-terminus. pGlu1 is essential for the chemotactic activity of MCP-2. Recombinant MCP-2 has Gln1 at the N terminus, 12-15% of which cyclizes automatically and forms pGlu1. The chemotactic activity of such MCP-2 mixture, which contains 12-15% pGlu1-form and 85-88% Gln1-form protein, is approximately 10 times lower when compared with that of fully cyclized MCP-2 preparation. Therefore, this chemokine is practically inactive without pGlu1. We have determined the complete crystal structure of MCP-2 that contains both pGlu1 and an intact C-terminus. With the existence of pGlu1, the conformation of the N-terminus allows two additional interactions between the two subunits of MCP-2 dimer: a hydrogen bond between pGlu1 and Asn17 and a salt bridge between Asp3 and Arg18. Consequently, both pGlu1 are anchored and buried, and thereby, both N-terminal regions are protected against protease degradation. We have also observed not previously reported extended helical nature of the C terminal region, which covers residues 58-74.


Subject(s)
Monocyte Chemoattractant Proteins/chemistry , Monocyte Chemoattractant Proteins/metabolism , Receptors, Chemokine/metabolism , Amino Acid Sequence , Chemokine CCL8 , Chemotaxis , Crystallization , Crystallography, X-Ray , Glutamine/chemistry , Humans , Lysine/chemistry , Models, Molecular , Molecular Sequence Data , Peptide Fragments/chemistry , Protein Conformation , Protein Isoforms/chemistry , Protein Structure, Secondary , Pyrrolidonecarboxylic Acid/chemistry
2.
Nucleosides Nucleotides Nucleic Acids ; 19(10-12): 1657-73, 2000.
Article in English | MEDLINE | ID: mdl-11200264

ABSTRACT

5'-O-Trityl-O2,3'-cycloanhydrothymidine (1) heated at 150 degrees C in the presence of O,O-diethyl phosphate or O,O-diethyl phosphorothioate anions undergoes rearrangement into N3-isomer (2); its structure was established by both advanced NMR methods and X-ray crystallographic studies. The most probable mechanism of 1-->2 rearrangement relies upon reversibility of glycosidic bond cleavage process.


Subject(s)
Thymidine/chemistry , Crystallography, X-Ray , Magnetic Resonance Spectroscopy , Nucleic Acid Conformation , Thymidine/analogs & derivatives
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