High-throughput sequencing outperforms traditional morphological methods in Blue Catfish diet analysis and reveals novel insights into diet ecology.

Blue Catfish Ictalurus furcatus are an invasive, yet economically important species in the Chesapeake Bay. However, their impact on the trophic ecology of this system is not well understood. In order to provide in-depth analysis of predation by Blue Catfish, we identified prey items using high-throughput DNA sequencing (HTS) of entire gastrointestinal tracts from 134 samples using two genetic markers, mitochondrial cytochrome c oxidase I (COI) and the nuclear 18S ribosomal RNA gene. We compared our HTS results to a more traditional "hybrid" approach that coupled morphological identification with DNA barcoding. The hybrid study was conducted on additional Blue Catfish samples (n = 617 stomachs) collected from the same location and season in the previous year. Taxonomic representation with HTS vastly surpassed that achieved with the hybrid methodology in Blue Catfish. Significantly, our HTS study identified several instances of at-risk and invasive species consumption not identified using the hybrid method, supporting the hypothesis that previous studies using morphological methods may greatly underestimate consumption of critical species. Finally, we report the novel finding that Blue Catfish diet diversity inversely correlates to daily flow rates, perhaps due to higher mobility and prey-seeking behaviors exhibited during lower flow.

Temporal invariance of social-ecological catchments.

Natural resources such as waterbodies, public parks, and wildlife refuges attract people from varying distances on the landscape, creating "social-ecological catchments." Catchments have provided great utility for understanding physical and social relationships within specific disciplines. Yet, catchments are rarely used across disciplines, such as its application to understand complex spatiotemporal dynamics between mobile human users and patchily distributed natural resources. We collected residence ZIP codes from 19,983 angler parties during 2014-2017 to construct seven angler-waterbody catchments in Nebraska, USA. We predicted that sizes of dense (10% utilization distribution) and dispersed (95% utilization distribution) angler-waterbody catchments would change across seasons and years as a function of diverse resource selection among mobile anglers. Contrary to expectations, we revealed that catchment size was invariant. We discuss how social (conservation actions) and ecological (low water quality, reduction in species diversity) conditions are expected to impact landscape patterns in resource use. We highlight how this simple concept and user-friendly technique can inform timely landscape-level conservation decisions within coupled social-ecological systems that are currently difficult to study and understand.

Dredging activity and associated sound have negligible effects on adult Atlantic sturgeon migration to spawning habitat in a large coastal river.

Dredging is considered a major threat/impedance to anadromous fish migrating to spawning habitat. Due to the perceived threat caused by dredging, environmental windows that restrict dredge operations are enforced within many rivers along the east coast. However, it is generally unknown how anadromous fish react to encountering an active dredge during spawning migrations. Atlantic sturgeon (ATS) are an endangered, anadromous species along the Atlantic slope of North America. To determine if and how an active dredge may affect ATS spawning migration, a Vemco Positioning System array was deployed around an active hydraulic-cutterhead dredge that adult ATS must traverse to reach spawning habitat in the James River, VA. Telemetry data showed that all ATS that entered the study area survived. ATS that migrated upstream during dredge operations (N = 103) traversed the dredge area and continued upstream to spawning habitat. Many ATS made multiple trips through the study area during dredge operations. There was no noticeable difference in swim behavior regardless of whether the dredge was absent or working within the study area. We suggest that dredging in the lower James River does not create a barrier for adult ATS migrating to spawning habitat or cause adults to significantly modify swim behavior. This is the first study to utilize fine-scale telemetry data to describe how an organism moves in relation to an active dredge. This methodology could be used to describe dredge-sturgeon interactions on different life stages and in other locations and could be expanded to other aquatic organisms of concern.