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1.
J Hosp Infect ; 93(2): 121-6, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26874935

ABSTRACT

BACKGROUND: Noroviruses are a leading cause of outbreaks globally and the most common cause of service disruption due to ward closures. Temporary suspension of visiting (TSV) is increasingly a recommended public health measure to reduce exposure, transmission and impact during norovirus outbreaks; however, preventing patient-visitor contact may contravene the ethos of person-centred care, and public acceptability of this measure is not known. AIM: To investigate the acceptability of TSV during norovirus outbreaks from the perspectives of patients, visitors and the wider public. METHODS: Cross-sectional survey of patients (N = 153), visitors (N = 175) and the public (N = 224) in three diverse areas in Scotland. Health Belief Model constructs were applied to understand ratings of acceptability of TSV during norovirus outbreaks, and to determine associations between these levels and various predictor variables. FINDINGS: The majority (84.6%) of respondents indicated that the possible benefits of TSV are greater than the possible disadvantages. Conversely, the majority (70%) of respondents disagreed that TSV 'is wrong as it ignores people's rights to have contact with family and friends'. The majority (81.6%) of respondents agreed that TSV would be more acceptable if exceptions were made for seriously ill or dying patients. Correlational analysis demonstrated that overall acceptability was positively related to perceived severity (r = 0.65), identified benefits (r = 0.54) and implementing additional communication strategies (r = 0.60); acceptability was negatively related to potential barriers (r = -0.49). CONCLUSIONS: There is greater service user and public support for the use of TSV than concerns around impinging upon patients' rights to have visitors. TSV should be considered as an acceptable infection control measure that could be implemented consistently during norovirus outbreaks.


Subject(s)
Caliciviridae Infections/epidemiology , Cross Infection/epidemiology , Disease Outbreaks , Disease Transmission, Infectious/prevention & control , Patient Acceptance of Health Care , Patients/psychology , Visitors to Patients/psychology , Adult , Aged , Aged, 80 and over , Caliciviridae Infections/transmission , Cross Infection/transmission , Cross-Sectional Studies , Female , Humans , Male , Middle Aged , Norovirus/isolation & purification , Scotland/epidemiology , Surveys and Questionnaires
2.
J Hosp Infect ; 92(3): 253-8, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26654470

ABSTRACT

BACKGROUND: Norovirus outbreaks cause significant patient distress and adversely affect healthcare service delivery. Measures to manage outbreaks include controlling patient/staff movement and advising visitors of the risks of infection; temporary suspension of visiting (TSV) is advocated by some. Factors influencing the use of TSV have not previously been reported. AIM: To describe current practice in Scotland regarding TSV during norovirus outbreaks. METHODS: Cross-sectional survey of Scottish Health Boards [National Health Service (NHS)] Infection Prevention Leads (N = 22) and independent care home (ICH) managers (N = 107). FINDINGS: TSV practice is inconsistent across care settings. NHS findings: although 86.4% reported a recent norovirus outbreak, only 36.4% reported having criteria in place to guide TSV decisions and only 57.9% of those who had an outbreak implemented TSV. Conversely, 77.6% ICH respondents do have TSV criteria in place; 70.1% who had previously experienced an outbreak all reported that they would normally close to visitors. The majority of both NHS (81.8%) and ICH (84.2%) respondents reported making exceptions to TSV for individual cases. Despite variation in practice, 75% NHS and 81.8% ICH respondents agreed that TSV was helpful in controlling outbreaks. Factors influencing TSV implementation decisions included use of judgement in individual cases, perceived lack of evidence for the role of visitors in transmission, and belief in patients' rights to have visitors. CONCLUSION: Implementation of TSV in Scotland is inconsistent, with variation in the use of criteria, personal beliefs, and professional judgements. Further research on the role of visitors in transmission and service-user acceptability of TSV is required for policy development.


Subject(s)
Caliciviridae Infections/epidemiology , Caliciviridae Infections/prevention & control , Disease Outbreaks , Disease Transmission, Infectious/prevention & control , Infection Control/methods , Norovirus/isolation & purification , Visitors to Patients , Caliciviridae Infections/transmission , Cross-Sectional Studies , Humans , Organizational Policy , Scotland/epidemiology
3.
J Hosp Infect ; 85(3): 170-82, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24051190

ABSTRACT

Infectious micro-organisms may be transmitted by a variety of routes, and some may be spread by more than one route. Respiratory and facial protection is required for those organisms that are usually transmitted via the droplet/airborne route, or when airborne particles have been artificially created, such as during 'aerosol-generating procedures'. A range of personal protective equipment that provides different degrees of facial and respiratory protection is available. It is apparent from the recent experiences with severe acute respiratory syndrome and pandemic (H1N1) 2009 influenza that healthcare workers may have difficulty in choosing the correct type of facial and respiratory protection in any given clinical situation. To address this issue, the Scientific Development Committee of the Healthcare Infection Society established a short-life working group to develop guidance. The guidance is based upon a review of the literature, which is published separately, and expert consensus.


Subject(s)
Communicable Diseases/transmission , Infection Control/methods , Masks/statistics & numerical data , Respiratory Protective Devices/statistics & numerical data , Humans
4.
J Hosp Infect ; 85(3): 165-9, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24035256

ABSTRACT

Infectious micro-organisms may be transmitted by a variety of routes. This is dependent on the particular pathogen and includes bloodborne, droplet, airborne, and contact transmission. Some micro-organisms are spread by more than one route. Respiratory and facial protection is required for those organisms which are usually transmitted via the droplet and/or airborne routes or when airborne particles have been created during 'aerosol-generating procedures'. This article presents a critical review of the recently published literature in this area that was undertaken by Health Protection Scotland and the Healthcare Infection Society and which informed the development of guidance on the use of respiratory and facial protection equipment by healthcare workers.


Subject(s)
Communicable Diseases/transmission , Infection Control/methods , Masks , Respiratory Protective Devices , Humans , Masks/statistics & numerical data , Respiratory Protective Devices/statistics & numerical data
5.
Br J Cancer ; 108(2): 438-41, 2013 Feb 05.
Article in English | MEDLINE | ID: mdl-23299532

ABSTRACT

BACKGROUND: A cohort of 629 patients with suspected Bannayan-Riley-Ruvalcaba syndrome or Cowden syndrome was tested for mutations in the PTEN gene. METHODS: Dosage analysis of PTEN was carried out using a PTEN-specific multiplex ligation-dependent probe amplification (MLPA) kit, whereas point mutation analysis was performed using direct sequencing. RESULTS: Approximately 4% of the patients from the testing cohort were heterozygously deleted for the two MLPA probe-binding sites situated in intron 1. The same deletion was subsequently seen in ∼3% of 220 normal controls, and in patients from the testing cohort with a causative mutation elsewhere in the PTEN gene. Sequencing of the variant revealed an 899 bp deletion, the 3' breakpoint of which is only 58 bp from the start of exon 2. CONCLUSION: Although all evidence suggests that the 899 bp deletion is a polymorphism with no clinical effect, it removes the binding sites of almost all published PTEN exon 2 forward primers, resulting in allelic loss during PCR.


Subject(s)
Hamartoma Syndrome, Multiple/diagnosis , Hamartoma Syndrome, Multiple/genetics , PTEN Phosphohydrolase/genetics , Sequence Deletion , DNA Mutational Analysis , Humans , Molecular Diagnostic Techniques , Sequence Analysis, DNA
6.
J Hosp Infect ; 82(2): 108-13, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22944362

ABSTRACT

BACKGROUND: The 2009-2010 norovirus season was reported anecdotally by infection prevention and control teams (IPCTs) to be one of the worst seasons in Scotland. At its peak, Health Protection Scotland's (HPS) weekly point prevalence identified that 53 wards were closed. AIM: To develop an annual cycle of learning lessons and improving systems to reduce the impact and incidence of norovirus outbreaks in Scotland. METHODS: An analysis of two end-of-year norovirus season evaluations (2009-2010 and 2010-2011) by IPCTs in Scotland using a national Plan, Do, Study, Act (PDSA) model. FINDINGS: The first evaluation (2009-2010) identified that IPCTs responded well when outbreaks were reported, but were not optimally prepared for the season. In addition, IPCTs had little data to describe their particular problems in detail. HPS planned for the 2010-2011 season with tools to optimize preparedness and norovirus management. The second evaluation (2010-2011) identified much more proactive responses to both preparedness and norovirus management. CONCLUSION: This national PDSA cycle has led to system improvements designed to reduce the incidence and impact of norovirus in NHS Scotland. The incidence of norovirus was reduced in the 2011-2012 season; however, confounding from the variation in circulating viruses makes it difficult to measure any effect of the system improvements. As noroviruses challenge the health service every year, mainly in winter months, the end-of-season evaluations can be used to improve planning for subsequent seasons to share and demonstrate good practice. As more years of data become available for analysis, the impact of system improvements will become measurable.


Subject(s)
Caliciviridae Infections/epidemiology , Caliciviridae Infections/prevention & control , Communicable Disease Control/methods , Cross Infection/epidemiology , Cross Infection/prevention & control , Norovirus/isolation & purification , Health Policy , Health Services Research , Humans , Incidence , Quality of Health Care , Scotland/epidemiology
7.
Clin Microbiol Infect ; 16(12): 1721-8, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20825434

ABSTRACT

Methicillin-resistant Staphylococcus aureus (MRSA) clones have caused a huge worldwide epidemic of hospital-acquired infections over the past 20-30 years and continue to evolve, including the advent of virulent community strains. The burden on healthcare services is highly significant, in particular because MRSA has not replaced susceptible staphylococcal infection but is an additional problem. Treatment strategies for MRSA are suboptimal and compromise the care of patients. MRSA is associated with serious morbidity and mortality, both within and without hospitals. Although the literature on the costs of MRSA and its control is suboptimal, it is clear that the control of MRSA is highly desirable and likely to be cost-effective. Any compromises in control are likely to be false economies.


Subject(s)
Disease Outbreaks/economics , Health Care Costs , Methicillin-Resistant Staphylococcus aureus , Staphylococcal Infections/economics , Clinical Protocols , Cost-Benefit Analysis , Cross Infection/economics , Disease Outbreaks/prevention & control , Health Policy/economics , Hospital Costs , Humans , Infection Control/economics , Quality of Life , Sentinel Surveillance , Staphylococcal Infections/epidemiology , Staphylococcal Infections/prevention & control , Staphylococcal Infections/therapy
9.
Am J Med Genet A ; 152A(2): 340-6, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20082465

ABSTRACT

Congenital pancreatic hypoplasia is a rare cause of neonatal diabetes. We report on a series of three patients with pancreatic agenesis and congenital heart defects. All had abdominal scan evidence of pancreatic agenesis. In addition, Patient 1 had a ventricular septal defect, patent ductus arteriosus and pulmonary artery stenosis; Patient 2 had a truncus arteriosus and Patient 3 had tetralogy of Fallot. Two of the three patients have developmental delay. All three patients were isolated cases within the family. Investigations included sequencing of GCK, ABCC8, IPF1, NEUROD1, PTF1A, HNF1B, INS, ISL1, NGN3, HHEX, G6PC2, TCF7L2, SOX4, FOXP3 (Patients 1 and 2), GATA4 and KCNJ11 genes (all three patients), but no mutations were found. Genetic investigation to exclude paternal UPD 6, methylation aberrations and duplications of 6q24 was also negative in all three. 22q11 deletion was excluded in all three patients. Array CGH in Patient (1) showed a approximately 250 kb, paternally inherited duplication of chromosome 12q [arr cgh 12q24.33 (B35:CHR12:131808577-132057649++) pat], not found in the other two patients. Permanent neonatal diabetes mellitus due to pancreatic hypoplasia with congenital heart defects has been reported before and may represent a distinct condition. We discuss this rare association and review previously reported literature.


Subject(s)
Developmental Disabilities/diagnosis , Developmental Disabilities/genetics , Heart Defects, Congenital/diagnosis , Heart Defects, Congenital/genetics , Pancreas/abnormalities , Pancreatic Diseases/complications , Child, Preschool , Chromosome Deletion , Chromosomes, Human, Pair 12 , Chromosomes, Human, Pair 22 , Comparative Genomic Hybridization , DNA Mutational Analysis , Developmental Disabilities/complications , Echocardiography/methods , Female , Heart Defects, Congenital/complications , Humans , Magnetic Resonance Imaging/methods , Male , Pancreatic Diseases/diagnosis
10.
Eye (Lond) ; 24(2): 328-33, 2010 Feb.
Article in English | MEDLINE | ID: mdl-19407846

ABSTRACT

PURPOSE: To identify the prevalence of myocilin gene mutations in a UK glaucoma cohort. METHODS: Primary open-angle (POAG) and normal tension glaucoma patients were recruited from the Southampton University Hospital Trust Eye Clinic and satellite regional glaucoma clinics. Phenotype data relating to disease history and other potential risk factors were recorded and blood samples collected for each consenting participant. Point mutation analysis of the myocilin gene was carried out using six overlapping PCR fragments covering the entire coding sequence of the gene. A total of 316 POAG samples were examined of which 7 (2.2 %) tested positive for disease-causing mutations in this gene. One of these seven non-synonymous mutations represented a previously unreported amino-acid substitution of cysteine for arginine at codon 296 (p.R296C) of the myocilin protein. CONCLUSIONS: This study identifies a 2.2% prevalence of myocilin mutations in a cohort of ethnically homogenous glaucoma patients selected from a UK ophthalmic clinic. A novel myocilin mutation is also described. This study identifies that myocilin genetic screening is feasible in NHS glaucoma clinics for genetic counselling and cascade testing of relatives of patients affected by myocilin glaucoma.


Subject(s)
Cytoskeletal Proteins/genetics , Eye Proteins/genetics , Glaucoma/genetics , Glycoproteins/genetics , Point Mutation/genetics , Adult , Aged , Aged, 80 and over , Cohort Studies , DNA Mutational Analysis , Exons/genetics , Feasibility Studies , Female , Glaucoma/epidemiology , Humans , Male , Middle Aged , Prevalence , Sequence Analysis, DNA , United Kingdom/epidemiology
11.
Am J Med Genet A ; 149A(2): 161-70, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19161152

ABSTRACT

Mutations in the gene encoding fibrillin 1 (FBN1) cause Marfan syndrome (MFS), and related connective tissue disorders. The disease spectrum is wide and while many genotype-phenotype correlations have been reported, few have been consistent. In this study FBN1 was analyzed in 113 patients with MFS or Marfan-like features. Fifty-three mutations were identified in 52 individuals, 41 of which were novel. The mutations comprised 26 missense, 11 splice site, 7 frameshift, 6 nonsense, 1 in-frame deletion, and 2 whole exon deletions. In common with previous studies, genotype-phenotype analysis showed that a FBN1 mutation was more likely to be identified in patients fulfilling Ghent criteria (P = 0.005) and in those who had ectopia lentis (EL) (P < 0.0001). Other previously reported genotype-phenotype correlations were also considered and a new inverse association between a mutation in exons 59-65, and EL emerged (P = 0.002).


Subject(s)
Marfan Syndrome/genetics , Microfilament Proteins/genetics , Mutation , Adolescent , Adult , Child , Child, Preschool , Connective Tissue Diseases , DNA Mutational Analysis , Ectopia Lentis , Female , Fibrillin-1 , Fibrillins , Genotype , Humans , Male , Middle Aged , Phenotype , Young Adult
13.
J Med Genet ; 44(9): 579-85, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17526800

ABSTRACT

BACKGROUND: The most commonly reported phenotypes described in patients with PTEN mutations are Bannayan-Riley-Ruvalcaba syndrome (BRRS), with childhood onset, macrocephaly, lipomas and developmental delay, and Cowden Syndrome (CS), an adult-onset condition recognised by mucocutaneous signs, with a risk of cancers, in particular those of the thyroid and breast. It has been suggested that BRRS and CS are the same condition, but the literature continues to separate them and seek a genotype-phenotype correlation. OBJECTIVE: To study the clinical features of patients with known PTEN mutations and observe any genotype-phenotype correlation. METHODS: In total, 42 people (25 probands and 17 non-probands) from 26 families of all ages with PTEN mutations were recruited through the UK clinical genetics services. A full clinical history and examination were undertaken. RESULTS: We were unable to demonstrate a genotype-phenotype correlation. Furthermore, our findings in a 31-year-old woman with CS and an exon 1 deletion refutes previous reports that whole exon deletions are only found in patients with a BRRS phenotype. CONCLUSION: Careful phenotyping gives further support for the suggestion that BRRS and CS are actually one condition, presenting variably at different ages, as in other tumour-suppressor disorders such as neurofibromatosis type 1. This has important counselling implications, such as advice about cancer surveillance, for children diagnosed with BRRS.


Subject(s)
Hamartoma Syndrome, Multiple/genetics , PTEN Phosphohydrolase/genetics , Adolescent , Adult , Age Factors , Aged , Child , Child, Preschool , Exons/genetics , Female , Genetic Heterogeneity , Genotype , Hamartoma Syndrome, Multiple/classification , Humans , Male , Middle Aged , Mutation , PTEN Phosphohydrolase/physiology , Penetrance , Phenotype , Syndrome , Terminology as Topic
14.
Br J Ophthalmol ; 91(11): 1471-6, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17522144

ABSTRACT

BACKGROUND: Developmental eye anomalies, which include anophthalmia (absent eye) or microphthalmia (small eye) are an important cause of severe visual impairment in infants and young children. Heterozygous mutations in SOX2, a SOX1B-HMG box transcription factor, have been found in up to 10% of individuals with severe microphthalmia or anophthalmia and such mutations could also be associated with a range of non-ocular abnormalities. METHODS: We performed mutation analysis on a new cohort of 120 patients with congenital eye abnormalities, mainly anophthalmia, microphthalmia and coloboma. Multiplex ligation-dependent probe amplification (MLPA) and fluorescence in situ hybridisation (FISH) were used to detect whole gene deletion. RESULTS: We identified four novel intragenic SOX2 mutations (one single base deletion, one single base duplication and two point mutations generating premature translational termination codons) and two further cases with the previously reported c.70del20 mutation. Of 52 patients with severe microphthalmia or anophthalmia analysed by MLPA, 5 were found to be deleted for the whole SOX2 gene and 1 had a partial deletion. In two of these, FISH studies identified sub-microscopic deletions involving a minimum of 328 Kb and 550 Kb. The SOX2 phenotypes include a patient with anophthalmia, oesophageal abnormalities and horseshoe kidney, and a patient with a retinal dystrophy implicating SOX2 in retinal development. CONCLUSION: Our results provide further evidence that SOX2 haploinsufficiency is a common cause of severe developmental ocular malformations and that background genetic variation determines the varying phenotypes. Given the high incidence of whole gene deletion we recommend that all patients with severe microphthalmia or anophthalmia, including unilateral cases be screened by MLPA and FISH for SOX2 deletions.


Subject(s)
Anophthalmos/genetics , Gene Deletion , HMGB Proteins/genetics , Transcription Factors/genetics , Adolescent , Adult , Child , Child, Preschool , DNA Mutational Analysis/methods , Eye Abnormalities/genetics , Female , Humans , In Situ Hybridization, Fluorescence , Male , Microphthalmos/genetics , Middle Aged , Phenotype , Polymerase Chain Reaction/methods , SOXB1 Transcription Factors
15.
J Med Genet ; 43(12): 908-16, 2006 Dec.
Article in English | MEDLINE | ID: mdl-16885183

ABSTRACT

OBJECTIVES: To describe the clinical findings and natural history in 22 carriers of an R460H mutation in the transforming growth factor beta receptor 2 gene (TGFbetaR2) from a five-generation kindred ascertained by familial aortic dissection. METHODS: 13 of the confirmed carriers were interviewed and examined, and information about the remaining carrier was obtained from medical records. Clinical information about deceased individuals was obtained, when possible, from postmortem reports, death certificates and medical records. RESULTS: There have been eight sudden deaths; the cause of death was aortic dissection in all six cases in which a postmortem examination was performed. Three individuals had undergone aortic replacement surgery. Dissection had occurred throughout the aorta, and in one case in the absence of aortic root dilatation. Subarachnoid haemorrhage, due to a ruptured berry aneurysm, had occurred in two individuals. Four gene carriers and one deceased family member who were investigated had tortuous cerebral blood vessels. One had tortuous vertebral arteries, two had tortuous carotid arteries and one a tortuous abdominal aorta. Two individuals were found to have a brachiocephalic artery aneurysm and a subclavian artery aneurysm, respectively. CONCLUSIONS: Despite the predisposition to aortic dilatation and dissection, individuals did not frequently manifest the skeletal features of Marfan syndrome, with the exception of joint hypermobility. No one individual had ocular lens dislocation. Striae and herniae were common. There was some overlap with Ehlers-Danlos syndrome type 4, OMIM 130050, with soft translucent skin, which is easily bruised. Other features were arthralgia, migraine and a tendency to fatigue easily, varicose veins and prominent skin striae. This family provides further evidence that mutations in TGFbetaR2 cause a distinct syndrome that needs to be distinguished from Marfan syndrome to direct investigation and management of patients and shows the natural history, spectrum of clinical features and variable penetrance of this newly recognised condition.


Subject(s)
Aortic Aneurysm/pathology , Aortic Dissection/pathology , Mutation, Missense/genetics , Receptors, Transforming Growth Factor beta/genetics , Abnormalities, Multiple/genetics , Abnormalities, Multiple/pathology , Adolescent , Adult , Aged , Aortic Dissection/genetics , Aortic Aneurysm/genetics , Bone and Bones/abnormalities , Craniofacial Abnormalities , DNA Mutational Analysis , Eye Abnormalities , Family Health , Fatigue/pathology , Female , Heterozygote , Humans , Male , Middle Aged , Migraine Disorders/pathology , Pedigree , Protein Serine-Threonine Kinases , Receptor, Transforming Growth Factor-beta Type II , Skin/pathology , Syndrome
16.
Hum Genet ; 119(1-2): 179-84, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16402210

ABSTRACT

Transient neonatal diabetes mellitus (TNDM) is characterised by intra-uterine growth retardation, while Beckwith-Wiedemann syndrome (BWS) is a clinically heterogeneous overgrowth syndrome. Both TNDM and BWS may be caused by aberrant loss of methylation (LOM) at imprinted loci on chromosomes 6q24 and 11p15.5 respectively. Here we describe two patients with a clinical diagnosis of TNDM caused by LOM at the maternally methylated imprinted domain on 6q24; in addition, these patients had LOM at the centromeric differentially methylated region of 11p15.5. This shows that imprinting anomalies can affect more than one imprinted locus and may alter the clinical presentation of imprinted disease.


Subject(s)
Beckwith-Wiedemann Syndrome/genetics , Centromere/genetics , Diabetes Mellitus/genetics , Epigenesis, Genetic , Beckwith-Wiedemann Syndrome/pathology , Birth Weight/genetics , Chromosomes, Human, Pair 11 , Chromosomes, Human, Pair 6 , DNA Methylation , Diabetes Mellitus/pathology , Genomic Imprinting , Genotype , Humans , Infant, Newborn
17.
J Med Genet ; 43(5): 451-6, 2006 May.
Article in English | MEDLINE | ID: mdl-16183801

ABSTRACT

MECP2 mutations are identifiable in approximately 80% of classic Rett syndrome (RTT), but less frequently in atypical RTT. We recruited 110 patients who fulfilled the diagnostic criteria for Rett syndrome and were referred to Cardiff for molecular analysis, but in whom an MECP2 mutation was not identifiable. Dosage analysis of MECP2 was carried out using multiplex ligation dependent probe amplification or quantitative fluorescent PCR. Large deletions were identified in 37.8% (14/37) of classic and 7.5% (4/53) of atypical RTT patients. Most large deletions contained a breakpoint in the deletion prone region of exon 4. The clinical phenotype was ascertained in all 18 of the deleted cases and in four further cases with large deletions identified in Goettingen. Five patients with large deletions had additional congenital anomalies, which was significantly more than in RTT patients with other MECP2 mutations (2/193; p<0.0001). Quantitative analysis should be included in molecular diagnostic strategies in both classic and atypical RTT.


Subject(s)
Chromosome Aberrations , Methyl-CpG-Binding Protein 2/genetics , Rett Syndrome/diagnosis , Rett Syndrome/genetics , Adolescent , Adult , Child , Child, Preschool , Cohort Studies , DNA Mutational Analysis , Female , Gene Dosage , Genetic Testing , Humans
20.
Br J Cancer ; 91(6): 1155-9, 2004 Sep 13.
Article in English | MEDLINE | ID: mdl-15475941

ABSTRACT

Multiplex ligation-dependent probe amplification (MLPA) is a recently described method for detecting gross deletions or duplications of DNA sequences, aberrations which are commonly overlooked by standard diagnostic analysis. To determine the incidence of copy number variants in cancer predisposition genes from families in the Wessex region, we have analysed the hMLH1 and hMSH2 genes in patients with hereditary nonpolyposis colorectal cancer (HNPCC), BRCA1 and BRCA2 in families with hereditary breast/ovarian cancer (BRCA) and APC in patients with familial adenomatous polyposis coli (FAP). Hereditary nonpolyposis colorectal cancer (n=162) and FAP (n=74) probands were fully screened for small mutations, and cases for which no causative abnormality were found (HNPCC, n=122; FAP, n=24) were screened by MLPA. Complete or partial gene deletions were identified in seven cases for hMSH2 (5.7% of mutation-negative HNPCC; 4.3% of all HNPCC), no cases for hMLH1 and six cases for APC (25% of mutation negative FAP; 8% of all FAP). For BRCA1 and BRCA2, a partial mutation screen was performed and 136 mutation-negative cases were selected for MLPA. Five deletions and one duplication were found for BRCA1 (4.4% of mutation-negative BRCA cases) and one deletion for BRCA2 (0.7% of mutation-negative BRCA cases). Cost analysis indicates it is marginally more cost effective to perform MLPA prior to point mutation screening, but the main advantage gained by prescreening is a greatly reduced reporting time for the patients who are positive. These data demonstrate that dosage analysis is an essential component of genetic screening for cancer predisposition genes.


Subject(s)
Genetic Predisposition to Disease/genetics , Neoplasms/genetics , Adenomatous Polyposis Coli/genetics , Breast Neoplasms/genetics , Colorectal Neoplasms, Hereditary Nonpolyposis/genetics , Female , Gene Amplification/genetics , Gene Dosage , Humans , Mutation/genetics , Ovarian Neoplasms/genetics
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