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1.
Comput Math Methods Med ; 2016: 1239861, 2016.
Article in English | MEDLINE | ID: mdl-27022405

ABSTRACT

Despite improvements in cancer therapy and treatments, tumor recurrence is a common event in cancer patients. One explanation of recurrence is that cancer therapy focuses on treatment of tumor cells and does not eradicate cancer stem cells (CSCs). CSCs are postulated to behave similar to normal stem cells in that their role is to maintain homeostasis. That is, when the population of tumor cells is reduced or depleted by treatment, CSCs will repopulate the tumor, causing recurrence. In this paper, we study the application of the CSC Hypothesis to the treatment of glioblastoma multiforme by immunotherapy. We extend the work of Kogan et al. (2008) to incorporate the dynamics of CSCs, prove the existence of a recurrence state, and provide an analysis of possible cancerous states and their dependence on treatment levels.


Subject(s)
Brain Neoplasms/pathology , Brain Neoplasms/therapy , Glioblastoma/pathology , Glioblastoma/therapy , Neoplastic Stem Cells/cytology , Algorithms , Humans , Immune System , Immunosuppressive Agents , Immunotherapy/methods , Interferon-gamma/metabolism , Models, Theoretical , Neoplasm Recurrence, Local , Transforming Growth Factor beta/metabolism , Treatment Outcome
2.
Nature ; 440(7084): 671-5, 2006 Mar 30.
Article in English | MEDLINE | ID: mdl-16572171

ABSTRACT

Here we present a finished sequence of human chromosome 15, together with a high-quality gene catalogue. As chromosome 15 is one of seven human chromosomes with a high rate of segmental duplication, we have carried out a detailed analysis of the duplication structure of the chromosome. Segmental duplications in chromosome 15 are largely clustered in two regions, on proximal and distal 15q; the proximal region is notable because recombination among the segmental duplications can result in deletions causing Prader-Willi and Angelman syndromes. Sequence analysis shows that the proximal and distal regions of 15q share extensive ancient similarity. Using a simple approach, we have been able to reconstruct many of the events by which the current duplication structure arose. We find that most of the intrachromosomal duplications seem to share a common ancestry. Finally, we demonstrate that some remaining gaps in the genome sequence are probably due to structural polymorphisms between haplotypes; this may explain a significant fraction of the gaps remaining in the human genome.


Subject(s)
Chromosomes, Human, Pair 15/genetics , Evolution, Molecular , Gene Duplication , Animals , Conserved Sequence/genetics , Genes , Genome, Human , Haplotypes/genetics , Humans , Macaca mulatta/genetics , Molecular Sequence Data , Multigene Family/genetics , Phylogeny , Polymorphism, Genetic/genetics , Sequence Analysis, DNA , Synteny/genetics
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