ABSTRACT
We report the draft genome sequence of a Mycobacterium avium complex isolate. This isolate has an estimated genome size of 5.1 Mb with an average GC content of 68.9% and is predicted to carry 4,497 protein-encoding genes and 317 pseudogenes.
ABSTRACT
In agricultural and other environments, inhalation of airborne microorganisms is linked to respiratory disease development. Bacterial endotoxins, peptidoglycans, and fungi are potential causative agents, but relative microbial characterization and inflammatory comparisons amongst agricultural dusts are not well described. The aim of this study was to determine the distribution of microbial endotoxin, 3-hydroxy fatty acids (3-OHFA), muramic acid, and ergosterol and evaluate inflammatory responses in human monocytes and bronchial epithelial cells with various dust samples. Settled surface dust was obtained from five environments: swine facility, dairy barn, grain elevator, domestic home (no pets), and domestic home with dog. Endotoxin concentration was determined by recombinant factor C (rFC). 3-OHFA, muramic acid, and ergosterol were measured using gas chromatography-mass spectrometry. Dust-induced inflammatory cytokine secretion in human monocytes and bronchial epithelial cells was evaluated. Endotoxin-independent dust-induced inflammatory responses were evaluated. Endotoxin and 3-OHFA levels were highest in agricultural dusts. Muramic acid, endotoxin, 3-OHFA, and ergosterol were detected in dusts samples. Muramic acid was highest in animal farming dusts. Ergosterol was most significant in grain elevator dust. Agricultural dusts induced monocyte tumor necrosis factor (TNF) alpha, interleukin (IL)-6, IL-8, and epithelial cell IL-6 and IL-8 secretion. Monocyte and epithelial IL-6 and IL-8 secretion was not dependent on endotoxin. House dust(s) induced monocyte TNFalpha, IL-6, and IL-8 secretion. Swine facility dust generally produced elevated responses compared to other dusts. Agricultural dusts are complex with significant microbial component contribution. Large animal farming dust(s)-induced inflammation is not entirely dependent on endotoxin. Addition of muramic acid to endotoxin in large animal farming environment monitoring is warranted.
Subject(s)
Agriculture , Air Pollutants, Occupational/analysis , Dust/analysis , Endotoxins/analysis , Ergosterol/analysis , Fatty Acids/analysis , Muramic Acids/analysis , Air Pollutants, Occupational/adverse effects , Animals , Cattle , Cells, Cultured , Chemokines/metabolism , Dogs , Endotoxins/adverse effects , Ergosterol/adverse effects , Fatty Acids/adverse effects , Gas Chromatography-Mass Spectrometry , Humans , Hydroxy Acids/adverse effects , Hydroxy Acids/analysis , Inhalation Exposure , Leukocytes, Mononuclear/drug effects , Leukocytes, Mononuclear/metabolism , Muramic Acids/adverse effects , Occupational Exposure/adverse effects , Respiratory Mucosa/drug effects , Respiratory Mucosa/metabolism , SwineABSTRACT
Organic dust exposure in agricultural animal environments results in airway diseases. Dendritic cells (DCs) orchestrate inflammatory immune response in the airways, but little is known about how organic dust affects differentiation and maturation of monocyte-derived immature and mature DCs (iDCs, mDCs). Peripheral blood monocytes were differentiated in vitro into iDCs with granulocyte-macrophage colony stimulating factor + IL-4 (6 days) with and without swine facility organic dust extract (ODE, 0.1%). Unlike control iDCs, ODE-conditioned iDCs maintained key monocyte properties (increased mCD14, increased phagocytic ability) while expressing DC features [increased mCD83, HLA-DR, CD80, CD86, diminished cytokine (TNF-alpha, IL-6) responsiveness]. At day 6, iDCs were cultured for an additional 48 h (days 7 and 8) with lipopolysaccharide (LPS) to induce mDCs. ODE-conditioned mDCs maintained high expression of mCD14(+) and elevated phagocytosis while their DC features weakened as evidenced by decreased CD11c, CD83, HLA-DR, CD86, and CCR7 expression and reduced lymphocyte-stimulating capacity. Similar results were observed when monocytes were exposed to ODE for only the first 48 h and with ODE depleted of endotoxin. Control iDCs exposed to ODE during the final 2 days of iDC maturation (days 7 and 8) did not differ from control (no ODE) iDCs in surface marker expression and phagocytic ability, but exhibited enhanced lymphocyte-stimulating capacity. Dust exposure alters monocyte differentiation to iDCs and prevents maturation of iDC to mDCs. The first 48 h of monocyte differentiation appears to be the susceptible period to exposure. Environmental exposures present during early monocyte differentiation may impact the critical balance of DCs in the lung.
Subject(s)
Cell Differentiation/immunology , Cytokines/metabolism , Dendritic Cells/immunology , Dust/immunology , Lymphocytes/immunology , Monocytes/immunology , Animals , Cells, Cultured , Cytokines/immunology , Dendritic Cells/metabolism , Flow Cytometry , Housing, Animal , Humans , Lymphocytes/metabolism , Monocytes/metabolism , Phagocytosis , SwineABSTRACT
This study examined captive cotton-top tamarin (Saguinus oedipus) behavior across 3 different exhibits: (a) a rainforest (30.5 m in diameter), where tamarins free-ranged with other species; (b) a caged outdoor exhibit (5 m in diameter); and (c) a caged enclosure, with access indoors (6 x 9m) and outdoors (2.5 x 2.5 m). The study observed tamarins using focal animal scan sampling in 10 min blocks. Scoring was on the percentage of intervals in which they engaged in 12 behaviors. The findings show significant differences in activity, inactivity, and visibility across exhibits and have important implications for reintroduction efforts.
