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1.
Annu Int Conf IEEE Eng Med Biol Soc ; 2022: 2502-2505, 2022 07.
Article in English | MEDLINE | ID: mdl-36086416

ABSTRACT

An increasing number of novel wearable health monitors utilize Bioimpedance (BioZ) to deliver meaningful health insights. Several integrated circuit BioZ chips have emerged to measure BioZ within the space constraints of wearable applications. One new integrated circuit BioZ chip, the MAX30009 Bioimpedance Analog Front End (AFE), has never been characterized. This paper aims to provide an initial characterization of the MAX30009. The AFE's performance was evaluated through a series of tests exploring the chip's accuracy, precision, and performance in the presence of realistic RC contact impedance circuits. The experiments found the AFE can achieve a standard deviation of 0.067 ohms and 0.033 degrees for a 100-ohm resistor and 0.0575 ohms and 0.249 degrees for a 227 nF capacitor at 50 kHz. Ultimately, a Bland-Altman analysis suggests that over the frequency range of 1 kHz - 340 kHz, the MAX30009 is interchangeable with a reference Zurich Instruments Impedance Analyzer. Clinical Relevance-The MAX30009 Bioimpedance chip is demonstrated to be interchangeable with a Zurich Instruments impedance analyzer over the range of 1 kHz - 340 kHz.


Subject(s)
Electric Impedance
2.
J R Soc Interface ; 16(155): 20190116, 2019 06 28.
Article in English | MEDLINE | ID: mdl-31164076

ABSTRACT

The relationship between form and function in trees is the subject of a longstanding debate in forest ecology and provides the basis for theories concerning forest ecosystem structure and metabolism. Trees interact with the wind in a dynamic manner and exhibit natural sway frequencies and damping processes that are important in understanding wind damage. Tree-wind dynamics are related to tree architecture, but this relationship is not well understood. We present a comprehensive view of natural sway frequencies in trees by compiling a dataset of field measurement spanning conifers and broadleaves, tropical and temperate forests. The field data show that a cantilever beam approximation adequately predicts the fundamental frequency of conifers, but not that of broadleaf trees. We also use structurally detailed tree dynamics simulations to test fundamental assumptions underpinning models of natural frequencies in trees. We model the dynamic properties of greater than 1000 trees using a finite-element approach based on accurate three-dimensional model trees derived from terrestrial laser scanning data. We show that (1) residual variation, the variation not explained by the cantilever beam approximation, in fundamental frequencies of broadleaf trees is driven by their architecture; (2) slender trees behave like a simple pendulum, with a single natural frequency dominating their motion, which makes them vulnerable to wind damage and (3) the presence of leaves decreases both the fundamental frequency and the damping ratio. These findings demonstrate the value of new three-dimensional measurements for understanding wind impacts on trees and suggest new directions for improving our understanding of tree dynamics from conifer plantations to natural forests.


Subject(s)
Forests , Models, Biological , Trees/physiology , Wind
3.
Article in Russian | MEDLINE | ID: mdl-30184396

ABSTRACT

The article, on the basis of the results of study of 2016, analyzes a comparative medical social effect of conjoint and separate residing of mother and child in the Children's Homes of the Penal Enforcement System. The materials of study consisted of original observations while working in the given system, data of reports of the Federal Penitentiary Service of Russia concerning medical care of women and children in 2011-2015 and data of address requests to the Children's homes under correctional facility in 2013 and 2015. The experience of functioning of the Children's homes of penitentiary system is summarized. The positive effect of conjoint keeping to indices of coverage with breast feeding is established. The coverage of natural and mixed feeding amounted to 65% in Children's Homes, including 83% in Children's Homes with conjoint residing of mother and child in Children's Homes and in other Children's Homes -- 43% (p<0.05). In 2015, a single refusal of child by condemned mother occurred in Children's Homes, while in 2013 there were 4 of such refusals (p<0.05). In Children homes with extended department of conjoint residence primary morbidity of children made up to 1,679‰ and in comparison, group -- 2014‰ that is reliably higher (p<0.05). According data of primary morbidity occurred decreasing of pool of diseases of respiratory organs from 1,002 to 872 per 1,000 children due to brining into operation of dormitory of conjoint residence of mother and child. This occurrence resulted in decreasing per 12% of number of hospitalizations by emergency indications. The conjoint residence of condemned mother and newborn results in harmonious growth, physical, neuropsychic development of child and also in development of motherhood feelings that is an important factor of re-socialization of the condemned woman. It is proposed to introduce normatively obligatory conjoint residence of mother and child in Children's homes of the Penal Enforcement System.


Subject(s)
Housing , Mother-Child Relations , Mothers , Prisons , Child , Child Development , Female , Humans , Infant, Newborn , Morbidity , Russia
4.
Interface Focus ; 8(2): 20170048, 2018 Apr 06.
Article in English | MEDLINE | ID: mdl-29503726

ABSTRACT

Terrestrial laser scanning (TLS) is providing exciting new ways to quantify tree and forest structure, particularly above-ground biomass (AGB). We show how TLS can address some of the key uncertainties and limitations of current approaches to estimating AGB based on empirical allometric scaling equations (ASEs) that underpin all large-scale estimates of AGB. TLS provides extremely detailed non-destructive measurements of tree form independent of tree size and shape. We show examples of three-dimensional (3D) TLS measurements from various tropical and temperate forests and describe how the resulting TLS point clouds can be used to produce quantitative 3D models of branch and trunk size, shape and distribution. These models can drastically improve estimates of AGB, provide new, improved large-scale ASEs, and deliver insights into a range of fundamental tree properties related to structure. Large quantities of detailed measurements of individual 3D tree structure also have the potential to open new and exciting avenues of research in areas where difficulties of measurement have until now prevented statistical approaches to detecting and understanding underlying patterns of scaling, form and function. We discuss these opportunities and some of the challenges that remain to be overcome to enable wider adoption of TLS methods.

5.
J Biol Chem ; 292(42): 17449-17460, 2017 10 20.
Article in English | MEDLINE | ID: mdl-28878017

ABSTRACT

The neonatal Fc receptor FcRn plays a critical role in the trafficking of IgGs across tissue barriers and in retaining high circulating concentrations of both IgG and albumin. Although generally beneficial from an immunological perspective in maintaining IgG populations, FcRn can contribute to the pathogenesis of autoimmune disorders when an abnormal immune response targets normal biological components. We previously described a monoclonal antibody (DX-2507) that binds to FcRn with high affinity at both neutral and acidic pH, prevents the simultaneous binding of IgG, and reduces circulating IgG levels in preclinical animal models. Here, we report a 2.5 Å resolution X-ray crystal structure of an FcRn-DX-2507 Fab complex, revealing a nearly complete overlap of the IgG-Fc binding site in FcRn by complementarity-determining regions in DX-2507. This overlap explains how DX-2507 blocks IgG binding to FcRn and thereby shortens IgG half-life by preventing IgGs from recycling back into circulation. Moreover, the complex structure explains how the DX-2507 interaction is pH-insensitive unlike normal Fc interactions and how serum albumin levels are unaffected by DX-2507 binding. These structural studies could inform antibody-based therapeutic approaches for limiting the effects of IgG-mediated autoimmune disease.


Subject(s)
Antibodies, Monoclonal, Murine-Derived/chemistry , Histocompatibility Antigens Class I/chemistry , Immunoglobulin G/chemistry , Receptors, Fc/antagonists & inhibitors , Receptors, Fc/chemistry , Animals , Crystallography, X-Ray , HEK293 Cells , Histocompatibility Antigens Class I/genetics , Humans , Mice , Protein Structure, Quaternary , Rats , Receptors, Fc/genetics
6.
Res Vet Sci ; 115: 221-225, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28505550

ABSTRACT

Intensive production systems can negatively affect the welfare of goats. Environmental enrichment techniques can be used to reduce stress. The aim of this study was analyze the effect of environmental enrichment on the histological characteristics of adrenal glands, cortisol levels and weekly weight gain of suckling Alpine French male kids under confinement. A randomised design was used to test the effect of the treatment. The animals (n=20) were randomly assigned to two treatments (enriched and non-enriched) with two replicates each. Enrichment elements included elevated sacks of henequen, trunks, tires and coconuts. The cortisol levels were measured weekly. Male kids were euthanized when their weight reached 10kg, and immediately after euthanasia, samples of the adrenal glands were collected. The adrenal glands were weighed and measured, and histological sections were taken and fixed. Four hundred cells were measured from each animal, with two blind measurements taken from each sample. There were no significant differences between experimental groups (P>0.05) in the weigh, size, the area of cells from the glomerulosa and fasciculata areas of the adrenal glands, the cortisol levels and weekly weight gain. However, there were histological differences between the glomerular and fascicular zones of the left and right adrenal glands of the different groups (P<0.05). These findings suggest that adrenal glands of animals in non-enriched environment, contained histological changes, suggestive of increased activity. We suggest testing adrenal histology as an indicator of stress and recommend the use of environmental enrichment as a means to reduce stress.


Subject(s)
Adrenal Glands/anatomy & histology , Animal Husbandry/methods , Animal Welfare , Goats/physiology , Hydrocortisone/blood , Weight Gain , Animals , Animals, Suckling/growth & development , Animals, Suckling/physiology , Environment , Goats/growth & development , Male , Random Allocation
7.
J Radiol Prot ; 36(4): 746-784, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27655037

ABSTRACT

A radiological assessment was carried out on the release of positron-emitting radioactive gases from a roof-level stack at a central London site. Different modelling approaches were performed to investigate the range of radiation doses to representative persons. Contributions from plume inhalation, gamma shine and immersion to effective dose were taken into account. Dry and wet surface deposition on the roof, and exposure from contamination on the skin of roof-workers, added only a mean 4.7% to effective dose and were neglected. A 1:200 scale model, consisting of the stack and surrounding buildings, was tested in a wind tunnel to simulate pollutant dispersion in the near-field region i.e. rooftop. Concentration field measurements in the wind tunnel were converted into effective dose, including for roof-workers installing glass cladding to the stack building. Changes in the building shape, from addition of the cladding layer, were investigated in terms of the near-field flow pattern and significant differences found between the two cases. Pollutant concentrations were also modelled using Air Dispersion Modelling System (ADMS) and the results used to calculate the effective dose using the same meteorological data set and source release terms. Sector averaged wind tunnel dose estimates were greater than the ADMS figure by approximately a factor of two to three. Different stack release heights were investigated in the wind tunnel and ADMS simulations in order to determine the best height for the replacement flue stack for the building. Other techniques were investigated: building wake models, modified Gaussian plume methods and uniform dilution into a hemispherical volume to show the wide variation in predicted dose possible with different approaches. Large differences found between simpler analytic approaches indicated that more robust radiological assessments, based on more complex modelling approaches, were required to achieve satisfactory estimates of radiation dose to representative groups in adjacent buildings and on the building rooftop.


Subject(s)
Air Pollutants, Radioactive/analysis , Gases/analysis , Radiation Monitoring/methods , Air Movements , Electrons , Facility Design and Construction , Humans , London , Models, Theoretical , Radiation Dosage , Weather
8.
Genes Immun ; 16(1): 1-7, 2015.
Article in English | MEDLINE | ID: mdl-25297839

ABSTRACT

Herpes zoster, commonly referred to as shingles, is caused by the varicella zoster virus (VZV). VZV initially manifests as chicken pox, most commonly in childhood, can remain asymptomatically latent in nerve tissues for many years and often re-emerges as shingles. Although reactivation may be related to immune suppression, aging and female sex, most inter-individual variability in re-emergence risk has not been explained to date. We performed a genome-wide association analyses in 22,981 participants (2280 shingles cases) from the electronic Medical Records and Genomics Network. Using Cox survival and logistic regression, we identified a genomic region in the combined and European ancestry groups that has an age of onset effect reaching genome-wide significance (P>1.0 × 10(-8)). This region tags the non-coding gene HCP5 (HLA Complex P5) in the major histocompatibility complex. This gene is an endogenous retrovirus and likely influences viral activity through regulatory functions. Variants in this genetic region are known to be associated with delay in development of AIDS in people infected by HIV. Our study provides further suggestion that this region may have a critical role in viral suppression and could potentially harbor a clinically actionable variant for the shingles vaccine.


Subject(s)
Genetic Predisposition to Disease , Genome-Wide Association Study , Herpes Zoster/genetics , Herpesvirus 3, Human/physiology , RNA, Untranslated/genetics , Age of Onset , Aged , Algorithms , Cohort Studies , Electronic Health Records , Female , Herpes Zoster/epidemiology , Herpes Zoster/ethnology , Herpes Zoster/immunology , Humans , Male , Middle Aged , RNA, Long Noncoding , Retrospective Studies , United States/epidemiology , United States/ethnology
9.
J Biol Chem ; 289(34): 23596-608, 2014 Aug 22.
Article in English | MEDLINE | ID: mdl-24970892

ABSTRACT

Plasma kallikrein (pKal) proteolytically cleaves high molecular weight kininogen to generate the potent vasodilator and the pro-inflammatory peptide, bradykinin. pKal activity is tightly regulated in healthy individuals by the serpin C1-inhibitor, but individuals with hereditary angioedema (HAE) are deficient in C1-inhibitor and consequently exhibit excessive bradykinin generation that in turn causes debilitating and potentially fatal swelling attacks. To develop a potential therapeutic agent for HAE and other pKal-mediated disorders, we used phage display to discover a fully human IgG1 monoclonal antibody (DX-2930) against pKal. In vitro experiments demonstrated that DX-2930 potently inhibits active pKal (Ki = 0.120 ± 0.005 nM) but does not target either the zymogen (prekallikrein) or any other serine protease tested. These findings are supported by a 2.1-Å resolution crystal structure of pKal complexed to a DX-2930 Fab construct, which establishes that the pKal active site is fully occluded by the antibody. DX-2930 injected subcutaneously into cynomolgus monkeys exhibited a long half-life (t½ ∼ 12.5 days) and blocked high molecular weight kininogen proteolysis in activated plasma in a dose- and time-dependent manner. Furthermore, subcutaneous DX-2930 reduced carrageenan-induced paw edema in rats. A potent and long acting inhibitor of pKal activity could be an effective treatment option for pKal-mediated diseases, such as HAE.


Subject(s)
Antibodies/immunology , Kallikreins/immunology , Amino Acid Sequence , Animals , Catalytic Domain , Crystallography, X-Ray , Enzyme-Linked Immunosorbent Assay , Humans , Kallikreins/blood , Molecular Sequence Data , Rats , Rats, Sprague-Dawley , Surface Plasmon Resonance
10.
Environ Sci Technol ; 48(13): 7280-8, 2014 Jul 01.
Article in English | MEDLINE | ID: mdl-24901673

ABSTRACT

We show 2008 seasonal trends of total and monomethyl mercury (THg and MeHg, respectively) in herbivorous (Calanus hyperboreus) and predatory (Chaetognaths, Paraeuchaeta glacialis, and Themisto abyssorum) zooplankton species from the Canadian High Arctic (Amundsen Gulf and the Canadian Beaufort Sea) in relation to ambient seawater and diet. It has recently been postulated that the Arctic marine environment may be exceptionally vulnerable to toxic MeHg contamination through postdepositional processes leading to mercury transformation and methylation. Here, we show that C. hyperboreus plays a hitherto unrecognized central role in mercury transformation while, itself, not manifesting inordinately high levels of THg compared to its prey (pelagic particulate organic matter (POM)). Calanus hyperboreus shifts Hg from mainly inorganic forms in pelagic POM (>99.5%) or ambient seawater (>90%) to primarily organic forms (>50%) in their tissue. We calculate that annual dietary intake of MeHg could supply only ∼30% of the MeHg body burden in C. hyperboreus and, thus, transformation within the species, perhaps mediated by gut microbial communities, or bioconcentration from ambient seawater likely play overriding roles. Seasonal THg trends in C. hyperboreus are variable and directly controlled by species-specific physiology, e.g., egg laying and grazing. Zooplankton that prey on species such as C. hyperboreus provide a further biomagnification of MeHg and reflect seasonal trends observed in their prey.


Subject(s)
Environmental Exposure/analysis , Food Chain , Mercury/metabolism , Amphipoda/metabolism , Animals , Arctic Regions , Biotransformation , Canada , Copepoda/metabolism , Environmental Monitoring , Fishes , Geography , Herbivory , Methylmercury Compounds/analysis , Organic Chemicals/analysis , Particulate Matter/analysis , Predatory Behavior , Seasons , Seawater/chemistry , Ships , Water Pollutants, Chemical/analysis , Zooplankton/metabolism
11.
J Evol Biol ; 27(8): 1757-63, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24825743

ABSTRACT

Theory predicts that sex can drive the evolution of conflict within the cell. During asexual reproduction, genetic material within the cell is inherited as a single unit, selecting for cooperation both within the genome as well as between the extra-genomic elements within the cell (e.g. plasmids and endosymbionts). Under sexual reproduction, this unity is broken down as parental genomes are distributed between meiotic progeny. Genetic elements able to transmit to more than 50% of meiotic progeny have a transmission advantage over the rest of the genome and are able to spread, even where they reduce the fitness of the individual as a whole. Sexual reproduction is therefore expected to drive the evolution of selfish genetic elements (SGEs). Here, we directly test this hypothesis by studying the evolution of two independent SGEs, the 2-µm plasmid and selfish mitochondria, in populations of Saccharomyces cerevisiae. Following 22 rounds of sexual reproduction, 2-µm copy number increased by approximately 13.2 (±5.6) copies per cell, whereas in asexual populations copy number decreased by approximately 5.1 (±1.5) copies per cell. Given that the burden imposed by this parasite increases with copy number, these results support the idea that sex drives the evolution of increased SGE virulence. Moreover, we found that mitochondria that are respiratory-deficient rapidly invaded sexual but not asexual populations, demonstrating that frequent outcrossed sex can drive the de novo evolution of genetic parasites. Our study highlights the genomic perils of sex and suggests that SGEs may play a key role in driving major evolutionary transitions, such as uniparental inheritance.


Subject(s)
Biological Evolution , Meiosis/physiology , Mitochondria/physiology , Plasmids/physiology , Saccharomyces cerevisiae/genetics , Sex , Analysis of Variance , DNA Primers/genetics , Mitochondria/genetics , Models, Genetic , Plasmids/genetics , Polymerase Chain Reaction , Reproduction/genetics , Reproduction, Asexual/genetics , Selection, Genetic
12.
J Hepatol ; 61(1): 75-81, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24607626

ABSTRACT

BACKGROUND & AIMS: Subtle inter-patient genetic variation and environmental factors combine to determine disease progression in non-alcoholic fatty liver disease (NAFLD). Carriage of the PNPLA3 rs738409 c.444C >G minor allele (encoding the I148M variant) has been robustly associated with advanced NAFLD. Although most hepatocellular carcinoma (HCC) is related to chronic viral hepatitis or alcoholic liver disease, the incidence of NAFLD-related HCC is increasing. We examined whether rs738409 C >G was associated with HCC-risk in patients with NAFLD. METHODS: PNPLA3 rs738409 genotype was determined by allelic discrimination in 100 European Caucasians with NAFLD-related HCC and 275 controls with histologically characterised NAFLD. RESULTS: Genotype frequencies were significantly different between NAFLD-HCC cases (CC=28, CG=43, GG=29) and NAFLD-controls (CC=125, CG=117, GG=33) (p=0.0001). In multivariate analysis adjusted for age, gender, diabetes, BMI, and presence of cirrhosis, carriage of each copy of the rs738409 minor (G) allele conferred an additive risk for HCC (adjusted OR 2.26 [95% CI 1.23-4.14], p=0.0082), with GG homozygotes exhibiting a 5-fold [1.47-17.29], p=0.01 increased risk over CC. When compared to the UK general population (1958 British Birth Cohort, n=1476), the risk-effect was more pronounced (GC vs. CC: unadjusted OR 2.52 [1.55-4.10], p=0.0002; GG vs. CC: OR 12.19 [6.89-21.58], p<0.0001). CONCLUSIONS: Carriage of the PNPLA3 rs738409 C >G polymorphism is not only associated with greater risk of progressive steatohepatitis and fibrosis but also of HCC. If validated, these findings suggest that PNPLA3 genotyping has the potential to contribute to multi-factorial patient-risk stratification, identifying those to whom HCC surveillance may be targeted.


Subject(s)
Carcinoma, Hepatocellular/etiology , Carcinoma, Hepatocellular/genetics , Lipase/genetics , Liver Neoplasms/etiology , Liver Neoplasms/genetics , Membrane Proteins/genetics , Non-alcoholic Fatty Liver Disease/complications , Non-alcoholic Fatty Liver Disease/genetics , Polymorphism, Single Nucleotide , Adult , Aged , Case-Control Studies , Cohort Studies , Disease Progression , Female , Gene Frequency , Genetic Association Studies , Homozygote , Humans , Male , Middle Aged , Non-alcoholic Fatty Liver Disease/pathology , Risk Factors , White People/genetics
13.
Am J Transplant ; 13(7): 1688-702, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23750746

ABSTRACT

Biliary epithelial cells (BEC) are important targets in some liver diseases, including acute allograft rejection. Although some injured BEC die, many can survive in function compromised states of senescence or phenotypic de-differentiation. This study was performed to examine changes in the phenotype of BEC during acute liver allograft rejection and the mechanism driving these changes. Liver allograft sections showed a positive correlation (p < 0.0013) between increasing T cell mediated acute rejection and the number of BEC expressing the senescence marker p21(WAF1/Cip) or the mesenchymal marker S100A4. This was modeled in vitro by examination of primary or immortalized BEC after acute oxidative stress. During the first 48 h, the expression of p21(WAF1/Cip) was increased transiently before returning to baseline. After this time BEC showed increased expression of mesenchymal proteins with a decrease in epithelial markers. Analysis of TGF-ß expression at mRNA and protein levels also showed a rapid increase in TGF-ß2 (p < 0.006) following oxidative stress. The epithelial de-differentiation observed in vitro was abrogated by pharmacological blockade of the ALK-5 component of the TGF-ß receptor. These data suggest that stress induced production of TGF-ß2 by BEC can modify liver allograft function by enhancing the de-differentiation of local epithelial cells.


Subject(s)
Bile Ducts, Intrahepatic/pathology , Cellular Senescence , Epithelial Cells/pathology , Graft Rejection/pathology , Liver Transplantation/pathology , Acute Disease , Bile Ducts, Intrahepatic/metabolism , Biopsy , Blotting, Western , Cells, Cultured , Densitometry , Enzyme-Linked Immunosorbent Assay , Epithelial Cells/metabolism , Gene Expression Regulation , Graft Rejection/genetics , Graft Rejection/metabolism , Humans , Immunohistochemistry , Oxidative Stress/genetics , RNA/genetics , Real-Time Polymerase Chain Reaction , Transforming Growth Factor beta2/biosynthesis , Transforming Growth Factor beta2/genetics , Transplantation, Homologous
14.
J Hepatol ; 59(2): 318-26, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23624001

ABSTRACT

BACKGROUND & AIMS: Sinusoidal obstruction syndrome (SOS) following oxaliplatin based chemotherapy can have a significant impact on post-operative outcome following resection of colorectal liver metastases. To date no relevant experimental models of oxaliplatin induced SOS have been described. The aim of this project was to establish a rodent model which could be utilised to investigate mechanisms underlying SOS to aid the development of therapeutic strategies. METHODS: C57Bl/6 mice, maintained on a purified diet, were treated with intra-peritoneal FOLFOX (n=10), or vehicle (n=10), weekly for five weeks and culled one week following final treatment. Sections of the liver and spleen were fixed in formalin and paraffin embedded for histological analysis. The role of oxidative stress on experimental-induced SOS was determined by dietary supplementation with butylated hydroxyanisole and N-acetylcysteine. RESULTS: FOLFOX treatment was associated with the development of sinusoidal dilatation and hepatocyte atrophy on H&E stained sections of the liver in keeping with SOS. Immunohistochemistry for p21 demonstrated the presence of replicative senescence within the sinusoidal endothelium. FOLFOX induced endothelial damage leads to a pro-thrombotic state within the liver associated with upregulation of PAI-1 (p<0.001), vWF (p<0.01) and Factor X (p<0.001), which may contribute to the propagation of liver injury. Dietary supplementation with the antioxidant BHA prevented the development of significant SOS. CONCLUSIONS: We have developed the first reproducible model of chemotherapy induced SOS that reflects the pathogenesis of this disease in patients. It appears that the use of antioxidants alongside oxaliplatin based chemotherapy may be of value in preventing the development of SOS in patients with colorectal liver metastases.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/toxicity , Hepatic Veno-Occlusive Disease/chemically induced , Organoplatinum Compounds/toxicity , Animals , Antioxidants/administration & dosage , Cell Cycle , Colorectal Neoplasms/drug therapy , Cyclin-Dependent Kinase Inhibitor p21/genetics , Cyclin-Dependent Kinase Inhibitor p21/metabolism , Cytokines/genetics , Cytokines/metabolism , Disease Models, Animal , Fluorouracil/toxicity , Hepatic Veno-Occlusive Disease/metabolism , Hepatic Veno-Occlusive Disease/pathology , Humans , Inflammation Mediators/metabolism , Leucovorin/toxicity , Liver Cirrhosis/chemically induced , Liver Neoplasms/drug therapy , Liver Neoplasms/secondary , Liver Neoplasms/surgery , Mice , Mice, Inbred C57BL , Neovascularization, Pathologic/chemically induced , Oxaliplatin , Oxidative Stress , Serpin E2/genetics , Serpin E2/metabolism , Thrombosis/chemically induced
15.
J Evol Biol ; 25(11): 2348-56, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22994599

ABSTRACT

Many autonomously replicating genetic elements exist as multiple copies within the cell. The copy number of these elements is often assumed to have important fitness consequences for both element and host, yet the forces shaping its evolution are not well understood. The 2 µm is a multicopy plasmid of Saccharomyces yeasts, encoding just four genes that are solely involved in plasmid replication. One simple model for the fitness relationship between yeasts and 2 µm is that plasmid copy number evolves as a trade-off between selection for increased vertical transmission, favouring high copy number, and selection for decreased virulence, favouring low copy number. To test this model, we experimentally manipulated the copy number of the plasmid and directly measured the fitness cost, in terms of growth rate reduction, associated with high plasmid copy number. We find that the fitness burden imposed by the 2 µm increases with plasmid copy number, such that each copy imposes a fitness burden of 0.17% (± 0.008%), greatly exceeding the cost expected for it to be stably maintained in yeast populations. Our results demonstrate the crucial importance of copy number in the evolution of yeast per 2 µm associations and pave the way for future studies examining how selection can shape the cost of multicopy elements.


Subject(s)
DNA Copy Number Variations , Genes, Fungal , Plasmids/genetics , Saccharomyces cerevisiae/genetics , Base Sequence , Evolution, Molecular , Fungal Proteins/genetics , Fungal Proteins/metabolism , Galactose/metabolism , Plasmids/metabolism , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Selection, Genetic , Uracil/metabolism
17.
Pathog Glob Health ; 106(1): 20-31, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22595271

ABSTRACT

OBJECTIVES: Anopheles gambiae is the primary vector of malaria in sub-Saharan Africa and is a potential target of genetic control programs. We determined the capacity of male A. gambiae created by germline transformation to introduce infertility into stable age-distribution populations. We also determined effects of the transgenes on life history. METHODS: Stable age-distribution populations of A. gambiae mosquitoes were established in large indoor cages. Male mosquitoes carrying an I-PpoI homing endonuclease gene were introduced at ×5 and ×10 release rates where they competed with target male mosquitoes for matings. Similar trials were conducted in small cages with an additional ×1 release level. RESULTS: Infertility was successfully introduced into all target populations. In supporting experiments, complete female infertility was observed in all strains and species of the A. gambiae complex to which transgenic males were mated. Life history experiments demonstrated that reductions in I-PpoI male vigor exist in the form of reduced adult male emergence, longevity and competitiveness. DISCUSSION: A. gambiae I-PpoI males are capable of introducing high levels of infertility in target populations in indoor cage trials. This was accomplished despite losses of vigor resulting from the HEG transgene. These results motivate further trials of sexually I-PpoI A. gambiae in outdoor cage and field trials.


Subject(s)
Anopheles/genetics , Endodeoxyribonucleases/genetics , Infertility, Male/genetics , Pest Control, Biological/methods , Animals , Animals, Genetically Modified/genetics , Anopheles/physiology , Competitive Behavior , Female , Insect Vectors/genetics , Insect Vectors/physiology , Malaria/prevention & control , Malaria/transmission , Male , Sexual Behavior, Animal
18.
Ann Surg ; 254(5): 731-6; discussion 736-7, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21997815

ABSTRACT

OBJECTIVE: To accurately document the incidence of lymph node metastases (LNM) in early esophageal adenocarcinoma with regard to the depth of invasion of the mucosa or submucosa. BACKGROUND: Endoscopic therapy is now being proposed as a viable treatment for submucosal esophageal adenocarcinoma. If such treatments are appropriate, then the risk of LNM must be shown to be low in these tumors. METHODS: One hundred nineteen consecutive patients underwent radical esophagectomy alone for treatment of superficial esophageal adenocarcinoma or high-grade dysplasia. The resection specimens were analyzed by an expert gastrointestinal pathologist and the presence of LNM and the depth of tumor invasion were recorded. Depth of invasion was classified as either confined to the mucosa, the first third of the submucosa, the middle third of the submucosa, or the final third of the submucosa. RESULTS: Fifty-four patients had high-grade dysplasia or tumors confined to the mucosa with no evidence of LNM (0/54, 0%), 65 patients had tumor invading the submucosa with 8 patients having LNM (8/65, 12%). Subclassification of submucosal invasion showed that 5 of 22 "first third of the submucosa" tumors had LNM (23%), 1 of 24 "middle third of the submucosa" tumors had LNM (4%), and 2 of 19 "final third of the submucosa" tumors had LNM (11%). CONCLUSION: Invasion of the submucosa is associated with significant risk of LNM. Patients with submucosal invasion are not suitable for endoscopic treatment and surgical resection remains the gold standard treatment for patients with submucosal adenocarcinoma who are fit to undergo the procedure.


Subject(s)
Adenocarcinoma/pathology , Esophageal Neoplasms/pathology , Adenocarcinoma/mortality , Adenocarcinoma/surgery , Aged , Esophageal Neoplasms/mortality , Esophageal Neoplasms/surgery , Esophagectomy , Female , Hospital Mortality , Humans , Lymph Node Excision , Lymphatic Metastasis , Male , Middle Aged , Mucous Membrane/pathology , Neoplasm Invasiveness
19.
Transplant Proc ; 42(10): 4573-7, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21168740

ABSTRACT

A 2-center retrospective analysis was performed in 60 patients undergoing liver transplantation for hepatitis C virus (HCV)-related disease (cyclosporine in 20, tacrolimus in 40). Mean (±SEM) follow-up was 23.6 ± 22.5 and 22.3 ± 13.7 months in patients receiving cyclosporine or tacrolimus, respectively. Clinically indicated biopsies were performed in 15/20 cyclosporine patients (75%) and 22/40 tacrolimus patients (55%; P = .17). The Ishak fibrosis score was significantly lower in cyclosporine-treated patients versus tacrolimus-treated patients (mean 1.7 ± 0.4 vs 3.1 ± 0.4; P = .023), as was percentage of fibrosis grade Ishak ≥4 (7% vs 41%; P = .028). The mean time to moderate fibrosis (Ishak score ≥3) was 38.2 ± 15.1 months in cyclosporine patients (4/15) and 23.5 ± 12.6 months in tacrolimus patients (14/22); the difference was not statistically significant (P = .09). This retrospective study suggests that cyclosporine-based immunosuppression is associated with less severe hepatic fibrosis in HCV-positive liver transplant recipients compared with tacrolimus-based regimens, but a larger prospective comparative trial is necessary to confirm these findings.


Subject(s)
Cyclosporine/administration & dosage , Hepatitis C/surgery , Immunosuppressive Agents/administration & dosage , Liver Cirrhosis/physiopathology , Liver Transplantation , Tacrolimus/administration & dosage , Disease Progression , Female , Humans , Male , Middle Aged , Retrospective Studies
20.
Gut ; 59(2): 267-73, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20176643

ABSTRACT

BACKGROUND/AIMS: The aim of this study was to assess the effect of functional ENPP1(ectoenzyme nucleotide pyrophosphate phosphodiesterase 1)/PC-1 (plasma cell antigen-1) and IRS-1 (insulin receptor substrate-1) polymorphisms influencing insulin receptor activity on liver damage in non-alcoholic fatty liver disease (NAFLD), the hepatic manifestation of the metabolic syndrome, whose progression is associated with the severity of insulin resistance. PATIENTS AND METHODS: 702 patients with biopsy-proven NAFLD from Italy and the UK, and 310 healthy controls. The Lys121Gln ENPP1/PC-1 and the Gly972Arg IRS-1 polymorphisms were evaluated by restriction analysis. Fibrosis was evaluated according to Kleiner. Insulin signalling activity was evaluated by measuring phosphoAKT levels by western blotting in a subset of obese non-diabetic patients. RESULTS: The ENPP1 121Gln and IRS-1 972Arg polymorphisms were detected in 28.7% and 18.1% of patients and associated with increased body weight/dyslipidaemia and diabetes risk, respectively. The ENPP1 121Gln allele was significantly associated with increased prevalence of fibrosis stage >1 and >2, which was higher in subjects also positive for the 972Arg IRS-1 polymorphism. At multivariate analysis, the presence of the ENPP1 121Gln and IRS-1 972Arg polymorphisms was independently associated with fibrosis >1 (OR 1.55, 95% CI 1.24 to 1.97; and OR 1.57, 95% CI 1.12 to 2.23, respectively). Both polymorphisms were associated with a marked reduction of approximately 70% of AKT activation status, reflecting insulin resistance and disease severity, in obese patients with NAFLD. CONCLUSIONS: The ENPP1 121Gln and IRS-1 972Arg polymorphisms affecting insulin receptor activity predispose to liver damage and decrease hepatic insulin signalling in patients with NAFLD. Defective insulin signalling may play a causal role in the progression of liver damage in NAFLD.


Subject(s)
Fatty Liver/genetics , Insulin Receptor Substrate Proteins/genetics , Phosphoric Diester Hydrolases/genetics , Pyrophosphatases/genetics , Receptor, Insulin/metabolism , Adult , Fatty Liver/metabolism , Fatty Liver/physiopathology , Female , Genetic Predisposition to Disease , Humans , Insulin Resistance/genetics , Male , Middle Aged , Polymorphism, Single Nucleotide , Severity of Illness Index , Signal Transduction/genetics
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